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The map label for this gene is ysnF [H]

Identifier: 220918479

GI number: 220918479

Start: 3774835

End: 3775536

Strand: Reverse

Name: ysnF [H]

Synonym: A2cp1_3384

Alternate gene names: 220918479

Gene position: 3775536-3774835 (Counterclockwise)

Preceding gene: 220918480

Following gene: 220918478

Centisome position: 75.07

GC content: 68.52

Gene sequence:

>702_bases
ATGAACGACCGCTGGATGGTGCAGGACGGGATGACGGTTCTGAGCAGCGATGGGGAAAAGCTCGGCAAGGTGGTCGCGAA
GGACGACCGGAGCTTCACGGTGGAGAAGGGCATCTTCTTCCCGAAGGACTACATCGCCAGGTACGACGAGATCAGCGGGA
TCACCGACGACGAGATCCGGCTCGCCATGACCAAGGACGCCTTCATCGCGATGCGCGAGCGGGGGGACTACGGGTTCACC
GACACCCGCGACACCACGCGGACCAGCGCCGAGGACATCCGGGTACCGGTGCACGAGGAGGAGCTCGACGTCCTGAAGCG
CGAGCGGGATGCCGGCGAGGTCCGGCTCCGCAAGGACGTCGTGACCGAGACCAAGCACGTCGACGTTCCCGTGACGCGCG
AGGTGGTCCACGTGGAGCGCACGCCGGCGACCGGCGAGCGCGCCATGAGCGCGGGGGAGAGGGCGTTCGAGAAGGACAGC
GTCTCGGTCCCGGTCCACGAGGAGGAGGTCGAGATCCGCAAGCGCCCCGTCGTCAAGGAGGAGGTCCGGCTCCGCAAGGA
GCGCGTGACCGAGCAGCGAGCGGCTGACGAGGACCTGCGCAAGGAGCGCATCCGCGTCGAGGGCGAGGGTGGAGCGAGCG
TCCGCAGGGACGAGCCCGGCGCGTTCTCGCCGAGGCGCGAGGACGACGACGAGCTGCCGTGA

Upstream 100 bases:

>100_bases
CCTCCCGACTCACCCGGTCGCCAGCCCGGTCGCGGCTCGCGCCGCAGGGCAGGCCGCTTGCCCAGGCATAAGCAGCATTT
GAGGCCGGGAGGGACGACAG

Downstream 100 bases:

>100_bases
CCGGTGGGCAGGACCGGAGTCCCCCCCGCCACGGTGCGCCGTGGCGGGGGGGGAGCCTGGTTCCGCGTGCGAGGCCGTGG
ATCGGGCCCGCGTCGTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNDRWMVQDGMTVLSSDGEKLGKVVAKDDRSFTVEKGIFFPKDYIARYDEISGITDDEIRLAMTKDAFIAMRERGDYGFT
DTRDTTRTSAEDIRVPVHEEELDVLKRERDAGEVRLRKDVVTETKHVDVPVTREVVHVERTPATGERAMSAGERAFEKDS
VSVPVHEEEVEIRKRPVVKEEVRLRKERVTEQRAADEDLRKERIRVEGEGGASVRRDEPGAFSPRREDDDELP

Sequences:

>Translated_233_residues
MNDRWMVQDGMTVLSSDGEKLGKVVAKDDRSFTVEKGIFFPKDYIARYDEISGITDDEIRLAMTKDAFIAMRERGDYGFT
DTRDTTRTSAEDIRVPVHEEELDVLKRERDAGEVRLRKDVVTETKHVDVPVTREVVHVERTPATGERAMSAGERAFEKDS
VSVPVHEEEVEIRKRPVVKEEVRLRKERVTEQRAADEDLRKERIRVEGEGGASVRRDEPGAFSPRREDDDELP
>Mature_233_residues
MNDRWMVQDGMTVLSSDGEKLGKVVAKDDRSFTVEKGIFFPKDYIARYDEISGITDDEIRLAMTKDAFIAMRERGDYGFT
DTRDTTRTSAEDIRVPVHEEELDVLKRERDAGEVRLRKDVVTETKHVDVPVTREVVHVERTPATGERAMSAGERAFEKDS
VSVPVHEEEVEIRKRPVVKEEVRLRKERVTEQRAADEDLRKERIRVEGEGGASVRRDEPGAFSPRREDDDELP

Specific function: Unknown

COG id: COG3861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011756
- InterPro:   IPR019060 [H]

Pfam domain/function: PF09557 DUF2382 [H]

EC number: NA

Molecular weight: Translated: 26759; Mature: 26759

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRWMVQDGMTVLSSDGEKLGKVVAKDDRSFTVEKGIFFPKDYIARYDEISGITDDEIR
CCCCEEECCCCEEECCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEE
LAMTKDAFIAMRERGDYGFTDTRDTTRTSAEDIRVPVHEEELDVLKRERDAGEVRLRKDV
EEEECCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHH
VTETKHVDVPVTREVVHVERTPATGERAMSAGERAFEKDSVSVPVHEEEVEIRKRPVVKE
HCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
EVRLRKERVTEQRAADEDLRKERIRVEGEGGASVRRDEPGAFSPRREDDDELP
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDRWMVQDGMTVLSSDGEKLGKVVAKDDRSFTVEKGIFFPKDYIARYDEISGITDDEIR
CCCCEEECCCCEEECCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEE
LAMTKDAFIAMRERGDYGFTDTRDTTRTSAEDIRVPVHEEELDVLKRERDAGEVRLRKDV
EEEECCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEHHHHH
VTETKHVDVPVTREVVHVERTPATGERAMSAGERAFEKDSVSVPVHEEEVEIRKRPVVKE
HCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
EVRLRKERVTEQRAADEDLRKERIRVEGEGGASVRRDEPGAFSPRREDDDELP
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 10568751; 11988534 [H]