| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918360
Identifier: 220918360
GI number: 220918360
Start: 3626779
End: 3627348
Strand: Reverse
Name: 220918360
Synonym: A2cp1_3264
Alternate gene names: NA
Gene position: 3627348-3626779 (Counterclockwise)
Preceding gene: 220918361
Following gene: 220918359
Centisome position: 72.12
GC content: 70.18
Gene sequence:
>570_bases ATGACGACCCGAACCCCGATCTCGATCTGCCTGGCGACGATGCTGCTGCTGGCCGCCTGCCGCTCCTCCGGCCGCGTGTA CCACGACACCGACATGGACTTCGGCTCGATCCGGACCGTCGCGGTGATGCCCTTCTCCAACCTGACCCGCGAGGCGGCCG CTGCCGACCGCGTGCGCGAGGTGTTCTCGAGCGCGCTCCTGGCGACCGGCGGCATCTACGTGCTGCCCCCGGGCGAGGTC GCCCGCGGGATCGCGCGCGCGGGCGTGGCGCTGCCCACCAGCCCCTCCGTCGAGGAGGTGGTCAAGCTCGGCTCGGTCCT CAAGGCGGATGCGGTGGTCGTCGGGGTCGTCAAGGAGTACGGGGAGGTCCGCTCCGGGACGACGGCCTCGAACGTGGTCT CCATCAGCGCGCAGCTGCTCGAGACCTCGACCGGCAAGGTGGTCTGGTCCGGTCAGTCGACCAAGGGCGGGGTGACGCTC AGTGATCGGCTCCTCGGGAGCGGGGGGGAGCCGGTCAATCGCATCACCGAGGAAGCCGTCGATGAGCTCCTGTCGCAGCT CTTCCACTAG
Upstream 100 bases:
>100_bases CATCGACAACCGTTCCCCCCAGAGCAGGACGAGAGCGGACTCCCTGATGCTGCACCTCTTCCTCACGCTCTCCTGAGCGC GACGCAAGCGCGAGCATGCC
Downstream 100 bases:
>100_bases CGCGGCGCGGCTCCTCGCGCTCGCGGTGGCCGCCGCCGGGTGCGGCAATCCGCGGGTGCCCGTGGCCACCGCGCCCGCGC CCGCGCGCGTGGCGGTATTC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTTRTPISICLATMLLLAACRSSGRVYHDTDMDFGSIRTVAVMPFSNLTREAAAADRVREVFSSALLATGGIYVLPPGEV ARGIARAGVALPTSPSVEEVVKLGSVLKADAVVVGVVKEYGEVRSGTTASNVVSISAQLLETSTGKVVWSGQSTKGGVTL SDRLLGSGGEPVNRITEEAVDELLSQLFH
Sequences:
>Translated_189_residues MTTRTPISICLATMLLLAACRSSGRVYHDTDMDFGSIRTVAVMPFSNLTREAAAADRVREVFSSALLATGGIYVLPPGEV ARGIARAGVALPTSPSVEEVVKLGSVLKADAVVVGVVKEYGEVRSGTTASNVVSISAQLLETSTGKVVWSGQSTKGGVTL SDRLLGSGGEPVNRITEEAVDELLSQLFH >Mature_188_residues TTRTPISICLATMLLLAACRSSGRVYHDTDMDFGSIRTVAVMPFSNLTREAAAADRVREVFSSALLATGGIYVLPPGEVA RGIARAGVALPTSPSVEEVVKLGSVLKADAVVVGVVKEYGEVRSGTTASNVVSISAQLLETSTGKVVWSGQSTKGGVTLS DRLLGSGGEPVNRITEEAVDELLSQLFH
Specific function: Unknown
COG id: COG4380
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19722; Mature: 19591
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRTPISICLATMLLLAACRSSGRVYHDTDMDFGSIRTVAVMPFSNLTREAAAADRVRE CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH VFSSALLATGGIYVLPPGEVARGIARAGVALPTSPSVEEVVKLGSVLKADAVVVGVVKEY HHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GEVRSGTTASNVVSISAQLLETSTGKVVWSGQSTKGGVTLSDRLLGSGGEPVNRITEEAV HHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEHHHHHCCCCCHHHHHHHHHH DELLSQLFH HHHHHHHCC >Mature Secondary Structure TTRTPISICLATMLLLAACRSSGRVYHDTDMDFGSIRTVAVMPFSNLTREAAAADRVRE CCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH VFSSALLATGGIYVLPPGEVARGIARAGVALPTSPSVEEVVKLGSVLKADAVVVGVVKEY HHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GEVRSGTTASNVVSISAQLLETSTGKVVWSGQSTKGGVTLSDRLLGSGGEPVNRITEEAV HHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEHHHHHCCCCCHHHHHHHHHH DELLSQLFH HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA