| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918359
Identifier: 220918359
GI number: 220918359
Start: 3625614
End: 3626807
Strand: Reverse
Name: 220918359
Synonym: A2cp1_3263
Alternate gene names: NA
Gene position: 3626807-3625614 (Counterclockwise)
Preceding gene: 220918360
Following gene: 220918358
Centisome position: 72.11
GC content: 76.13
Gene sequence:
>1194_bases ATGAGCTCCTGTCGCAGCTCTTCCACTAGCGCGGCGCGGCTCCTCGCGCTCGCGGTGGCCGCCGCCGGGTGCGGCAATCC GCGGGTGCCCGTGGCCACCGCGCCCGCGCCCGCGCGCGTGGCGGTATTCCCCACGGTGAACGTCGGCGGTGGACCGGCGC CGGGCGAGGAGCTCGATCGCGGCGTCGAGGGCATCGTCGCGGGCGCAGGGCTCGAGGTGGTGCCGCGCCCCGTGCTCGAG GACTTCCTCGCCCGCCACCGCGTCCGGAACACGGCCGGCGTGGACGCGGAGACCGCGCGCGCGGCGCGCGAGGAGCTGGG GGTCGACGCGGTGGTGCTCGTCTCGGTGGGCGCCTACCAGCCGCAGGCACCGCCGCGGCTCGCCGTCACGCTCCGCCTCG TGTCCACCGGGGAGCCGCCCCGGATCCTCTGGATCGACGGGGCGGTGCGCGCCGGCGACGAGCAGCCGGGGCTGCTCGGC CTCGGCGTCATCCGCGATCCCGCGCGCGTCCAGCGCATCGTGCTCGACCGGCTCGGCCGCTCGCTCCGCGCGTACCTGCG CGGCGGCGCGCGGGCCGGGACCTGCGAGCCCGAGCGCCGTTTCGGTCCGCGGCTGGTGTTTCGCTCGCCCCGGTTGGGCG AGGGGCCGTTCAAGGTGGCGGTCCTGCCGTTCGTGAACGAGACTCGGCGGCGGAGCGCGGGCGACGCGGCGGCGCTCGAG CTGGTCCGACAGCTCTCGGCCTCGCCGGCGGTCGAGGTGGTCGAGCCGGGAGTGGTCCGGTCGGTGCTGCTCGAGAACCG CCTGATCATGCCAGGCGGCGTCTCGCTGGACGTGGCGAGCACCGTACTCGACAAGCTGGACGCGGACCTGGTCGTCGCCG GCATCGTGCGGCGGTACGAGGACGGCGGCGGCGCGTCTTCGGACGCCGCGCGCGTGGAGCTCGCGGTCCAGGTGCTCGAC CGCGCGCACGAGGTCGTCGCGTGGAGCTCCGTGTCACAGGGGGACGGCGGCAGCGGCGTGTGGTGGTTCGATCTCGGCAG GGTCCAGAACTCCGCCGACCTCCTGTGCCGCGTGGCAGCGTCGGTCGTCGACCGCATGGACCTGGAGGTCGCGCGCGGCT CCGGCGGCGCCGACGCCACTCCCCAGCGCAGCCGGCTCACCGGTTCGCTGCGGCGCGTCCACGGGGCGCCATGA
Upstream 100 bases:
>100_bases GTCTGGTCCGGTCAGTCGACCAAGGGCGGGGTGACGCTCAGTGATCGGCTCCTCGGGAGCGGGGGGGAGCCGGTCAATCG CATCACCGAGGAAGCCGTCG
Downstream 100 bases:
>100_bases CGGTCGAAGACGCGTTCGCCGACAGTCGCTGCGGGAATCCGTGGCGCGGCGCAATGGTTGCGCCGAGGCGTTTCAATGGT TCGGAAAACACAACCGAATT
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSSCRSSSTSAARLLALAVAAAGCGNPRVPVATAPAPARVAVFPTVNVGGGPAPGEELDRGVEGIVAGAGLEVVPRPVLE DFLARHRVRNTAGVDAETARAAREELGVDAVVLVSVGAYQPQAPPRLAVTLRLVSTGEPPRILWIDGAVRAGDEQPGLLG LGVIRDPARVQRIVLDRLGRSLRAYLRGGARAGTCEPERRFGPRLVFRSPRLGEGPFKVAVLPFVNETRRRSAGDAAALE LVRQLSASPAVEVVEPGVVRSVLLENRLIMPGGVSLDVASTVLDKLDADLVVAGIVRRYEDGGGASSDAARVELAVQVLD RAHEVVAWSSVSQGDGGSGVWWFDLGRVQNSADLLCRVAASVVDRMDLEVARGSGGADATPQRSRLTGSLRRVHGAP
Sequences:
>Translated_397_residues MSSCRSSSTSAARLLALAVAAAGCGNPRVPVATAPAPARVAVFPTVNVGGGPAPGEELDRGVEGIVAGAGLEVVPRPVLE DFLARHRVRNTAGVDAETARAAREELGVDAVVLVSVGAYQPQAPPRLAVTLRLVSTGEPPRILWIDGAVRAGDEQPGLLG LGVIRDPARVQRIVLDRLGRSLRAYLRGGARAGTCEPERRFGPRLVFRSPRLGEGPFKVAVLPFVNETRRRSAGDAAALE LVRQLSASPAVEVVEPGVVRSVLLENRLIMPGGVSLDVASTVLDKLDADLVVAGIVRRYEDGGGASSDAARVELAVQVLD RAHEVVAWSSVSQGDGGSGVWWFDLGRVQNSADLLCRVAASVVDRMDLEVARGSGGADATPQRSRLTGSLRRVHGAP >Mature_396_residues SSCRSSSTSAARLLALAVAAAGCGNPRVPVATAPAPARVAVFPTVNVGGGPAPGEELDRGVEGIVAGAGLEVVPRPVLED FLARHRVRNTAGVDAETARAAREELGVDAVVLVSVGAYQPQAPPRLAVTLRLVSTGEPPRILWIDGAVRAGDEQPGLLGL GVIRDPARVQRIVLDRLGRSLRAYLRGGARAGTCEPERRFGPRLVFRSPRLGEGPFKVAVLPFVNETRRRSAGDAAALEL VRQLSASPAVEVVEPGVVRSVLLENRLIMPGGVSLDVASTVLDKLDADLVVAGIVRRYEDGGGASSDAARVELAVQVLDR AHEVVAWSSVSQGDGGSGVWWFDLGRVQNSADLLCRVAASVVDRMDLEVARGSGGADATPQRSRLTGSLRRVHGAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41474; Mature: 41343
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSCRSSSTSAARLLALAVAAAGCGNPRVPVATAPAPARVAVFPTVNVGGGPAPGEELDR CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCHHHHHH GVEGIVAGAGLEVVPRPVLEDFLARHRVRNTAGVDAETARAAREELGVDAVVLVSVGAYQ HHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCC PQAPPRLAVTLRLVSTGEPPRILWIDGAVRAGDEQPGLLGLGVIRDPARVQRIVLDRLGR CCCCCCEEEEEEEEECCCCCEEEEECCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH SLRAYLRGGARAGTCEPERRFGPRLVFRSPRLGEGPFKVAVLPFVNETRRRSAGDAAALE HHHHHHCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEEEEEECCCCHHHHCCCCHHHHHH LVRQLSASPAVEVVEPGVVRSVLLENRLIMPGGVSLDVASTVLDKLDADLVVAGIVRRYE HHHHHCCCCCHHHHCCHHHHHHHHHCCEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHC DGGGASSDAARVELAVQVLDRAHEVVAWSSVSQGDGGSGVWWFDLGRVQNSADLLCRVAA CCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH SVVDRMDLEVARGSGGADATPQRSRLTGSLRRVHGAP HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SSCRSSSTSAARLLALAVAAAGCGNPRVPVATAPAPARVAVFPTVNVGGGPAPGEELDR CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCHHHHHH GVEGIVAGAGLEVVPRPVLEDFLARHRVRNTAGVDAETARAAREELGVDAVVLVSVGAYQ HHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCCC PQAPPRLAVTLRLVSTGEPPRILWIDGAVRAGDEQPGLLGLGVIRDPARVQRIVLDRLGR CCCCCCEEEEEEEEECCCCCEEEEECCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH SLRAYLRGGARAGTCEPERRFGPRLVFRSPRLGEGPFKVAVLPFVNETRRRSAGDAAALE HHHHHHCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEEEEEECCCCHHHHCCCCHHHHHH LVRQLSASPAVEVVEPGVVRSVLLENRLIMPGGVSLDVASTVLDKLDADLVVAGIVRRYE HHHHHCCCCCHHHHCCHHHHHHHHHCCEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHC DGGGASSDAARVELAVQVLDRAHEVVAWSSVSQGDGGSGVWWFDLGRVQNSADLLCRVAA CCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH SVVDRMDLEVARGSGGADATPQRSRLTGSLRRVHGAP HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA