Click here to switch to the map view.

The map label for this gene is nrfH [H]

Identifier: 220918190

GI number: 220918190

Start: 3418232

End: 3418687

Strand: Reverse

Name: nrfH [H]

Synonym: A2cp1_3093

Alternate gene names: 220918190

Gene position: 3418687-3418232 (Counterclockwise)

Preceding gene: 220918191

Following gene: 220918189

Centisome position: 67.98

GC content: 69.74

Gene sequence:

>456_bases
ATGCGAACGAGCCGCGGAGTGTCCGTGTTCCCGCTGTCGCTCGTGCTGGCGGCCACCGCCGGGCTGGCGCTCGGGCTCGG
CGCGTTCGCGTTCGACTACGCGAAGGGCTCCTCGTACCTCGGGAACGACCCGAGGACCTGCGCCAACTGCCACGTGATGG
AAGGCCACTACGCCGGGTGGCTGGCGGGCACGCACCACGCGGTCGCGACCTGCAATGACTGCCACACGCCCGCCGCGTTC
ATCCCGAAGTACTGGGTGAAGGCCACCAACGGCTATCACCACTCCATGGCATTCACGATGGGTGGCTACCCGGACGCCAT
CAAGGCGCGCCCCGAGAGCGCCGAGGTGGTGGAAGACAACTGCCGCCGCTGCCACGCCGCCGTGGTCGAGGACATCGCGC
ACGGGGGCGACGTCTCCTGCGTGCGGTGCCACCGCAACGTGGGCCACCTCCGCTGA

Upstream 100 bases:

>100_bases
TGCGCATCCCCGATTGAAGTACCCAGCTCCGGGCGCAATCCGCGCTAACGTGCGCCAATCGCGAACGTGCGCGTCGCCGG
AGGGCGACCTTCGAGGGTCC

Downstream 100 bases:

>100_bases
TCCGCCCGTCCGCCCCGCAGCACCGGAGAAGGAGCACGCAATGCCCGCCGAGACCCAGCCCACCAAGAACCGCGCGCTGC
TCATCGCGCTCGTGGCCGGG

Product: cytochrome c nitrate reductase, small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRTSRGVSVFPLSLVLAATAGLALGLGAFAFDYAKGSSYLGNDPRTCANCHVMEGHYAGWLAGTHHAVATCNDCHTPAAF
IPKYWVKATNGYHHSMAFTMGGYPDAIKARPESAEVVEDNCRRCHAAVVEDIAHGGDVSCVRCHRNVGHLR

Sequences:

>Translated_151_residues
MRTSRGVSVFPLSLVLAATAGLALGLGAFAFDYAKGSSYLGNDPRTCANCHVMEGHYAGWLAGTHHAVATCNDCHTPAAF
IPKYWVKATNGYHHSMAFTMGGYPDAIKARPESAEVVEDNCRRCHAAVVEDIAHGGDVSCVRCHRNVGHLR
>Mature_151_residues
MRTSRGVSVFPLSLVLAATAGLALGLGAFAFDYAKGSSYLGNDPRTCANCHVMEGHYAGWLAGTHHAVATCNDCHTPAAF
IPKYWVKATNGYHHSMAFTMGGYPDAIKARPESAEVVEDNCRRCHAAVVEDIAHGGDVSCVRCHRNVGHLR

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 16172; Mature: 16172

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSRGVSVFPLSLVLAATAGLALGLGAFAFDYAKGSSYLGNDPRTCANCHVMEGHYAGW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEE
LAGTHHAVATCNDCHTPAAFIPKYWVKATNGYHHSMAFTMGGYPDAIKARPESAEVVEDN
ECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHCCCCCCHHHHHHH
CRRCHAAVVEDIAHGGDVSCVRCHRNVGHLR
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MRTSRGVSVFPLSLVLAATAGLALGLGAFAFDYAKGSSYLGNDPRTCANCHVMEGHYAGW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEE
LAGTHHAVATCNDCHTPAAFIPKYWVKATNGYHHSMAFTMGGYPDAIKARPESAEVVEDN
ECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHCCCCCCHHHHHHH
CRRCHAAVVEDIAHGGDVSCVRCHRNVGHLR
HHHHHHHHHHHHHCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]