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The map label for this gene is nrfA [H]

Identifier: 220918189

GI number: 220918189

Start: 3416518

End: 3418191

Strand: Reverse

Name: nrfA [H]

Synonym: A2cp1_3092

Alternate gene names: 220918189

Gene position: 3418191-3416518 (Counterclockwise)

Preceding gene: 220918190

Following gene: 220918187

Centisome position: 67.97

GC content: 70.61

Gene sequence:

>1674_bases
ATGCCCGCCGAGACCCAGCCCACCAAGAACCGCGCGCTGCTCATCGCGCTCGTGGCCGGGGTGTTCGCCCTGGTCGCGGT
GGGCGTCGCGATGCTGCTGGTGAACATCAGCGAGAAGAAGTCGGAGGCGCGCTTCTCGTACGTGCGGGTGGTCGAGGTCG
GCGAGGACGACACCGACCCGGCCAAGTGGGGCAAGAACTGGCCGCGCGAGTTCGACGACTACAAGCGCACCGCCGAGCGG
ACCAGCACGAAGTACGGCGGCGCGATCGGCACCGCCGAGGGCGAGATGGCGCCGCAGAAGGCGGAGCGCGACCCCTGGCT
GAAGCGCGTCTTCGCCGGCTACCTGTTCGCGGTGGACTACCGCGACCGCCGCGGCCACGCCTTCATGCTGAAGGACCAGG
AGATCACGAAGCGCAACATCCCGGGCGAGGGAAAGCAGTCCGGCAACTGCCTCCACTGCCACGGCTCGATCATGCCGCTC
TACCGCAAGCTCGGGAAGGAGGCGGCGCCGCAGGGGTCGCCGGCCGAGCAGCTCCAGGCCGGCCTCGCGAAGGTGGCGGA
GATGGGCTACTGGGACGCGCACAAGGCGCTCGAGGAGATGGGCGGCGGCAAGGCGCACCCGGTCTCCTGCGTGGACTGCC
ACGATCCGGCGTCGATGGAGGTGCGGGTCTCGCGCCCCGGCTTCATCGCCGGCATCCAGAAGCTCGCGGCGGGCTCGGCG
GAGGTGCCGCACCTGCCGTCGATCGACCGCTGGCGCAAGGGCGACCGGTCGAAGCCCTACGATCCGAACCTCGACTCCAC
GCGCCAGGAGCGCCGCGCCTACGTGTGCGGGCAGTGCCACGTCGAGTACTTCTGCGGGAAGGGAATGACGCTGCTGTTCC
CGTGGGCCGAGGGGCTCAAGGTCGAGAACGCCGAGCACCTCTACGACAACCTGCAGGTCAAGGGGCAGCGCTTCAAGGAC
TGGGTGCACGCCGAGACCGGGTTCGAGGTGCTGAAGGCGCAGCACCCCGAGTTCGAGGTGTGGAGCCAGGGCATCCACGC
CCGGAGCGGCGTCACCTGCGCCGACTGCCACATGCCGTACAAGCGCGAGGGCGCGCAGAAGTACTCCGACCACTGGGTCC
GCAGCCCGCTGCTCCAGCCGAACCGCGCCTGCGCCACCTGTCACCCGCTGACCGACGACGAGCTGAAGGCGCGCGTGCTC
GGCATCCAGGACCGGCACTTCGCGCTGCTCACCCGCGCCGGCAACGCCGCGGTGGCCATGATCGACGCCATCGTGACGGT
GCGGAAGCCGTACGACGAGCGGAACCTCGCCGCGGCCACCGCCAAGGCGAAGGACACGCTCGGGAAGCAGGACGCGTTCC
AGAAGGCGCCGAAGGAGGAGCAGGACAAGAAGCTGGCGGCCGAGGTGAAGGCGAACCTGCTCGCCTCCTGGCGCGAGGTG
ATCGCGAAGACGCCGGCGCTGCAGGAGCTGGAGAAGCTGCAGCGCGCCGCGCAGTGGCGCCTCGACTTCGTGGCGGCCGA
GAACTCGATGGGCTTCCACGCGCCGCAGGAGCTGGCCCGCATCCTGGGCGAGTCGATCGACCTCTCGCGCGAGGCGGAGG
TGAAGGCCACGCGCCTCGCCGCCGGGACCACCGCGTCCGCGGCGGCCGTGCCCGCGTCGCAGCCGGGCAGGTAG

Upstream 100 bases:

>100_bases
GCGCACGGGGGCGACGTCTCCTGCGTGCGGTGCCACCGCAACGTGGGCCACCTCCGCTGATCCGCCCGTCCGCCCCGCAG
CACCGGAGAAGGAGCACGCA

Downstream 100 bases:

>100_bases
GGACCAGCGCGCCGGCGCCGCTCACCGGTCGCGGTGCACGAGCCCGGGGGCGAACGCCGGCGCGCGCGTCGCAGTTCAGA
GGATCGGGCAGCCCGGCGGC

Product: Nitrite reductase

Products: NA

Alternate protein names: Ammonia-forming cytochrome c nitrite reductase; Cytochrome c nitrite reductase [H]

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MPAETQPTKNRALLIALVAGVFALVAVGVAMLLVNISEKKSEARFSYVRVVEVGEDDTDPAKWGKNWPREFDDYKRTAER
TSTKYGGAIGTAEGEMAPQKAERDPWLKRVFAGYLFAVDYRDRRGHAFMLKDQEITKRNIPGEGKQSGNCLHCHGSIMPL
YRKLGKEAAPQGSPAEQLQAGLAKVAEMGYWDAHKALEEMGGGKAHPVSCVDCHDPASMEVRVSRPGFIAGIQKLAAGSA
EVPHLPSIDRWRKGDRSKPYDPNLDSTRQERRAYVCGQCHVEYFCGKGMTLLFPWAEGLKVENAEHLYDNLQVKGQRFKD
WVHAETGFEVLKAQHPEFEVWSQGIHARSGVTCADCHMPYKREGAQKYSDHWVRSPLLQPNRACATCHPLTDDELKARVL
GIQDRHFALLTRAGNAAVAMIDAIVTVRKPYDERNLAAATAKAKDTLGKQDAFQKAPKEEQDKKLAAEVKANLLASWREV
IAKTPALQELEKLQRAAQWRLDFVAAENSMGFHAPQELARILGESIDLSREAEVKATRLAAGTTASAAAVPASQPGR

Sequences:

>Translated_557_residues
MPAETQPTKNRALLIALVAGVFALVAVGVAMLLVNISEKKSEARFSYVRVVEVGEDDTDPAKWGKNWPREFDDYKRTAER
TSTKYGGAIGTAEGEMAPQKAERDPWLKRVFAGYLFAVDYRDRRGHAFMLKDQEITKRNIPGEGKQSGNCLHCHGSIMPL
YRKLGKEAAPQGSPAEQLQAGLAKVAEMGYWDAHKALEEMGGGKAHPVSCVDCHDPASMEVRVSRPGFIAGIQKLAAGSA
EVPHLPSIDRWRKGDRSKPYDPNLDSTRQERRAYVCGQCHVEYFCGKGMTLLFPWAEGLKVENAEHLYDNLQVKGQRFKD
WVHAETGFEVLKAQHPEFEVWSQGIHARSGVTCADCHMPYKREGAQKYSDHWVRSPLLQPNRACATCHPLTDDELKARVL
GIQDRHFALLTRAGNAAVAMIDAIVTVRKPYDERNLAAATAKAKDTLGKQDAFQKAPKEEQDKKLAAEVKANLLASWREV
IAKTPALQELEKLQRAAQWRLDFVAAENSMGFHAPQELARILGESIDLSREAEVKATRLAAGTTASAAAVPASQPGR
>Mature_556_residues
PAETQPTKNRALLIALVAGVFALVAVGVAMLLVNISEKKSEARFSYVRVVEVGEDDTDPAKWGKNWPREFDDYKRTAERT
STKYGGAIGTAEGEMAPQKAERDPWLKRVFAGYLFAVDYRDRRGHAFMLKDQEITKRNIPGEGKQSGNCLHCHGSIMPLY
RKLGKEAAPQGSPAEQLQAGLAKVAEMGYWDAHKALEEMGGGKAHPVSCVDCHDPASMEVRVSRPGFIAGIQKLAAGSAE
VPHLPSIDRWRKGDRSKPYDPNLDSTRQERRAYVCGQCHVEYFCGKGMTLLFPWAEGLKVENAEHLYDNLQVKGQRFKDW
VHAETGFEVLKAQHPEFEVWSQGIHARSGVTCADCHMPYKREGAQKYSDHWVRSPLLQPNRACATCHPLTDDELKARVLG
IQDRHFALLTRAGNAAVAMIDAIVTVRKPYDERNLAAATAKAKDTLGKQDAFQKAPKEEQDKKLAAEVKANLLASWREVI
AKTPALQELEKLQRAAQWRLDFVAAENSMGFHAPQELARILGESIDLSREAEVKATRLAAGTTASAAAVPASQPGR

Specific function: Plays a role in nitrite reduction [H]

COG id: COG3303

COG function: function code P; Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c-552 family [H]

Homologues:

Organism=Escherichia coli, GI1790506, Length=441, Percent_Identity=29.4784580498866, Blast_Score=161, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003321
- InterPro:   IPR017570
- InterPro:   IPR011031 [H]

Pfam domain/function: PF02335 Cytochrom_C552 [H]

EC number: =1.7.2.2 [H]

Molecular weight: Translated: 61601; Mature: 61469

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00369 PTS_HPR_HIS ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAETQPTKNRALLIALVAGVFALVAVGVAMLLVNISEKKSEARFSYVRVVEVGEDDTDP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCH
AKWGKNWPREFDDYKRTAERTSTKYGGAIGTAEGEMAPQKAERDPWLKRVFAGYLFAVDY
HHHCCCCCHHHHHHHHHHHHHCHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEEC
RDRRGHAFMLKDQEITKRNIPGEGKQSGNCLHCHGSIMPLYRKLGKEAAPQGSPAEQLQA
CCCCCCEEEEECCHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCHHCCCCCCCHHHHHH
GLAKVAEMGYWDAHKALEEMGGGKAHPVSCVDCHDPASMEVRVSRPGFIAGIQKLAAGSA
HHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCC
EVPHLPSIDRWRKGDRSKPYDPNLDSTRQERRAYVCGQCHVEYFCGKGMTLLFPWAEGLK
CCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHEEEHHCCCCCEEEEECCCCCC
VENAEHLYDNLQVKGQRFKDWVHAETGFEVLKAQHPEFEVWSQGIHARSGVTCADCHMPY
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEHHCCCCH
KREGAQKYSDHWVRSPLLQPNRACATCHPLTDDELKARVLGIQDRHFALLTRAGNAAVAM
HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHH
IDAIVTVRKPYDERNLAAATAKAKDTLGKQDAFQKAPKEEQDKKLAAEVKANLLASWREV
HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IAKTPALQELEKLQRAAQWRLDFVAAENSMGFHAPQELARILGESIDLSREAEVKATRLA
HHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHC
AGTTASAAAVPASQPGR
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAETQPTKNRALLIALVAGVFALVAVGVAMLLVNISEKKSEARFSYVRVVEVGEDDTDP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCH
AKWGKNWPREFDDYKRTAERTSTKYGGAIGTAEGEMAPQKAERDPWLKRVFAGYLFAVDY
HHHCCCCCHHHHHHHHHHHHHCHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEEC
RDRRGHAFMLKDQEITKRNIPGEGKQSGNCLHCHGSIMPLYRKLGKEAAPQGSPAEQLQA
CCCCCCEEEEECCHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCHHCCCCCCCHHHHHH
GLAKVAEMGYWDAHKALEEMGGGKAHPVSCVDCHDPASMEVRVSRPGFIAGIQKLAAGSA
HHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCC
EVPHLPSIDRWRKGDRSKPYDPNLDSTRQERRAYVCGQCHVEYFCGKGMTLLFPWAEGLK
CCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHEEEHHCCCCCEEEEECCCCCC
VENAEHLYDNLQVKGQRFKDWVHAETGFEVLKAQHPEFEVWSQGIHARSGVTCADCHMPY
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEHHCCCCH
KREGAQKYSDHWVRSPLLQPNRACATCHPLTDDELKARVLGIQDRHFALLTRAGNAAVAM
HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHH
IDAIVTVRKPYDERNLAAATAKAKDTLGKQDAFQKAPKEEQDKKLAAEVKANLLASWREV
HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IAKTPALQELEKLQRAAQWRLDFVAAENSMGFHAPQELARILGESIDLSREAEVKATRLA
HHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHC
AGTTASAAAVPASQPGR
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA