Click here to switch to the map view.

The map label for this gene is fliN [H]

Identifier: 220917688

GI number: 220917688

Start: 2869449

End: 2869742

Strand: Direct

Name: fliN [H]

Synonym: A2cp1_2589

Alternate gene names: 220917688

Gene position: 2869449-2869742 (Clockwise)

Preceding gene: 220917687

Following gene: 220917689

Centisome position: 57.05

GC content: 69.73

Gene sequence:

>294_bases
ATGGAAGCCCAGACCCCGCGGAACGGCGACTCGACCCGGCGCCTCGACATGCTGCTCGACGTGCCGCTCGAGGTGAACGT
CGAGCTCGGCCGCACCCGCATGACCATCCAGGACCTGCTCCAGCTCGCGCCCGGCTCGGTGATCGAGCTGGACAAGGTCG
CCGGCGAGCCGCTCGACATCCTGGTGAACGGGCGGCTGGTGGCGCGCGGCGAGGCGGTGGTGGTGAACGACAAGTTCGGC
GTGCGCATCACGGACATCGTCTCTCCCCAGGAGCGCATCCAGCGCCTCCGCTAG

Upstream 100 bases:

>100_bases
GGGACGCCCACCGTGTCCGGCGGGAGCCTGGCGCTGGTGGTGGACCAGCCGCTCCGCCCGCCCGCCCTGACGCCGGCCAC
CCTGCTGCGCTGAGGATCCC

Downstream 100 bases:

>100_bases
GAGCCGAGCCATGCCCACCCCGCTCCTCGCCGCGCTCCTGCTCTCCGCCGCGCCCCTGCCCGCCGCCCTTCCCGCCGCCG
CGCCGGACCCCGCCGCGCCC

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MEAQTPRNGDSTRRLDMLLDVPLEVNVELGRTRMTIQDLLQLAPGSVIELDKVAGEPLDILVNGRLVARGEAVVVNDKFG
VRITDIVSPQERIQRLR

Sequences:

>Translated_97_residues
MEAQTPRNGDSTRRLDMLLDVPLEVNVELGRTRMTIQDLLQLAPGSVIELDKVAGEPLDILVNGRLVARGEAVVVNDKFG
VRITDIVSPQERIQRLR
>Mature_97_residues
MEAQTPRNGDSTRRLDMLLDVPLEVNVELGRTRMTIQDLLQLAPGSVIELDKVAGEPLDILVNGRLVARGEAVVVNDKFG
VRITDIVSPQERIQRLR

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=82, Percent_Identity=63.4146341463415, Blast_Score=115, Evalue=7e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 10802; Mature: 10802

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAQTPRNGDSTRRLDMLLDVPLEVNVELGRTRMTIQDLLQLAPGSVIELDKVAGEPLDI
CCCCCCCCCCCCEEEEEEEECCEEEEEEECCEEECHHHHHHHCCCCEEEEHHHCCCCEEE
LVNGRLVARGEAVVVNDKFGVRITDIVSPQERIQRLR
EECCEEEECCCEEEEECCCCEEEEECCCHHHHHHHCC
>Mature Secondary Structure
MEAQTPRNGDSTRRLDMLLDVPLEVNVELGRTRMTIQDLLQLAPGSVIELDKVAGEPLDI
CCCCCCCCCCCCEEEEEEEECCEEEEEEECCEEECHHHHHHHCCCCEEEEHHHCCCCEEE
LVNGRLVARGEAVVVNDKFGVRITDIVSPQERIQRLR
EECCEEEECCCEEEEECCCCEEEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2651416; 9097040; 9278503 [H]