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The map label for this gene is fliM [H]

Identifier: 220917687

GI number: 220917687

Start: 2868425

End: 2869441

Strand: Direct

Name: fliM [H]

Synonym: A2cp1_2588

Alternate gene names: 220917687

Gene position: 2868425-2869441 (Clockwise)

Preceding gene: 220917686

Following gene: 220917688

Centisome position: 57.03

GC content: 75.52

Gene sequence:

>1017_bases
GTGAGCCCGCCCGTGCCCGCCGTCCTCACGTCCGACGAGATCAAGGCGCTCATGGGCGCCATCCAGGACGGCCGCCTCGC
CACCGAGGGCGCGCCGTCCAGCCGGGCGCAGGTCGCGCCCTACGACCTCACCAGCCAGGACCGGATTATCCGCGGCCAGA
TGCCCACGCTCGACGCCATCAACGAGCAGGTGGCGTCGATGCTGGGGATCGGGCTGGCCGGCCGGACCCGGCAGGCGCTG
CGGATCACCTCCGCGCCGGCCACGCTGCTGAAGTTCGCCGACCTCGCGCCGCTGCTCGCGCCGCCCGCGTCGGTGTGCAT
CCTGGGCCTGGGCGCGTCCTACGGGTTCGCGCTGGCGGTGCTGGAGGCGGGCCTGGCCGAGGCGCTGCTCGCCGCGGCGC
TCGGCGACCGGCGCGTCCGCCAGCCCGAGGAGGGAGGCGACACGCGCCGCGAGCTCACCTCGGTGGAGCAGCTCGTGCTG
CGCCGCCTCCTGCGCCTCCTCGCCGAGGCGATGACGCAGGCCTGGGCGCCGGTGCTGCCGTTCGAGCCGGAGGTGCTGCG
CCTCGAGCCCGACCCGCGCATGGCCAGCATCGCCTCGCCCACCGACGTCGGCATCGTCTCCGGGTTCGAGCTGAAGGGCG
GCATCGAGGGGCGCCTGCACCTCGTCATCCCCTACGCCGCGGTGGAGTCCGCCAAGCAGAAGCTCTCCTCGCCCCGTCGC
CTGTCGCAGCGCGCCGACGAGCGGTTCGCCGACGCGCTGGCGCGCGAGGTGGAGCAGGTGCCGGTGGAGATCCGCGGCCT
CTACGGCCGCGCGCGCATCCCGTTCGCGCGCCTGCTGGAGCTCGCCGAGGGCGAGGTCCTGCTGCTCGACACCGACGAGG
GCAGGCCGGTGCCGGTCGTCGTGCAGGGGCGGGAGAAGCTCCTCGGGACGCCCACCGTGTCCGGCGGGAGCCTGGCGCTG
GTGGTGGACCAGCCGCTCCGCCCGCCCGCCCTGACGCCGGCCACCCTGCTGCGCTGA

Upstream 100 bases:

>100_bases
ACGCCATCGCGCGCACCAAGGCGGCGCTCTCCGAGCGGCTGGGCGCGCTGGCCGCCGGCGTCGAGATCCGCGCGCTCTAC
ATCACCGACCTCGTCATCCA

Downstream 100 bases:

>100_bases
GGATCCCATGGAAGCCCAGACCCCGCGGAACGGCGACTCGACCCGGCGCCTCGACATGCTGCTCGACGTGCCGCTCGAGG
TGAACGTCGAGCTCGGCCGC

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSPPVPAVLTSDEIKALMGAIQDGRLATEGAPSSRAQVAPYDLTSQDRIIRGQMPTLDAINEQVASMLGIGLAGRTRQAL
RITSAPATLLKFADLAPLLAPPASVCILGLGASYGFALAVLEAGLAEALLAAALGDRRVRQPEEGGDTRRELTSVEQLVL
RRLLRLLAEAMTQAWAPVLPFEPEVLRLEPDPRMASIASPTDVGIVSGFELKGGIEGRLHLVIPYAAVESAKQKLSSPRR
LSQRADERFADALAREVEQVPVEIRGLYGRARIPFARLLELAEGEVLLLDTDEGRPVPVVVQGREKLLGTPTVSGGSLAL
VVDQPLRPPALTPATLLR

Sequences:

>Translated_338_residues
MSPPVPAVLTSDEIKALMGAIQDGRLATEGAPSSRAQVAPYDLTSQDRIIRGQMPTLDAINEQVASMLGIGLAGRTRQAL
RITSAPATLLKFADLAPLLAPPASVCILGLGASYGFALAVLEAGLAEALLAAALGDRRVRQPEEGGDTRRELTSVEQLVL
RRLLRLLAEAMTQAWAPVLPFEPEVLRLEPDPRMASIASPTDVGIVSGFELKGGIEGRLHLVIPYAAVESAKQKLSSPRR
LSQRADERFADALAREVEQVPVEIRGLYGRARIPFARLLELAEGEVLLLDTDEGRPVPVVVQGREKLLGTPTVSGGSLAL
VVDQPLRPPALTPATLLR
>Mature_337_residues
SPPVPAVLTSDEIKALMGAIQDGRLATEGAPSSRAQVAPYDLTSQDRIIRGQMPTLDAINEQVASMLGIGLAGRTRQALR
ITSAPATLLKFADLAPLLAPPASVCILGLGASYGFALAVLEAGLAEALLAAALGDRRVRQPEEGGDTRRELTSVEQLVLR
RLLRLLAEAMTQAWAPVLPFEPEVLRLEPDPRMASIASPTDVGIVSGFELKGGIEGRLHLVIPYAAVESAKQKLSSPRRL
SQRADERFADALAREVEQVPVEIRGLYGRARIPFARLLELAEGEVLLLDTDEGRPVPVVVQGREKLLGTPTVSGGSLALV
VDQPLRPPALTPATLLR

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=285, Percent_Identity=26.3157894736842, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 36017; Mature: 35886

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPVPAVLTSDEIKALMGAIQDGRLATEGAPSSRAQVAPYDLTSQDRIIRGQMPTLDAI
CCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCHHHH
NEQVASMLGIGLAGRTRQALRITSAPATLLKFADLAPLLAPPASVCILGLGASYGFALAV
HHHHHHHHHCCCCCCCCHHEEEECCHHHHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHH
LEAGLAEALLAAALGDRRVRQPEEGGDTRRELTSVEQLVLRRLLRLLAEAMTQAWAPVLP
HHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FEPEVLRLEPDPRMASIASPTDVGIVSGFELKGGIEGRLHLVIPYAAVESAKQKLSSPRR
CCCCEEEECCCCCCCCCCCCCCCCEEECEEECCCCCCEEEEEEEHHHHHHHHHHHCCHHH
LSQRADERFADALAREVEQVPVEIRGLYGRARIPFARLLELAEGEVLLLDTDEGRPVPVV
HHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCEEEE
VQGREKLLGTPTVSGGSLALVVDQPLRPPALTPATLLR
ECCCHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHCC
>Mature Secondary Structure 
SPPVPAVLTSDEIKALMGAIQDGRLATEGAPSSRAQVAPYDLTSQDRIIRGQMPTLDAI
CCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCHHHH
NEQVASMLGIGLAGRTRQALRITSAPATLLKFADLAPLLAPPASVCILGLGASYGFALAV
HHHHHHHHHCCCCCCCCHHEEEECCHHHHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHH
LEAGLAEALLAAALGDRRVRQPEEGGDTRRELTSVEQLVLRRLLRLLAEAMTQAWAPVLP
HHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FEPEVLRLEPDPRMASIASPTDVGIVSGFELKGGIEGRLHLVIPYAAVESAKQKLSSPRR
CCCCEEEECCCCCCCCCCCCCCCCEEECEEECCCCCCEEEEEEEHHHHHHHHHHHCCHHH
LSQRADERFADALAREVEQVPVEIRGLYGRARIPFARLLELAEGEVLLLDTDEGRPVPVV
HHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCEEEE
VQGREKLLGTPTVSGGSLALVVDQPLRPPALTPATLLR
ECCCHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]