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The map label for this gene is ytxE [H]

Identifier: 220917668

GI number: 220917668

Start: 2846462

End: 2847241

Strand: Direct

Name: ytxE [H]

Synonym: A2cp1_2569

Alternate gene names: 220917668

Gene position: 2846462-2847241 (Clockwise)

Preceding gene: 220917667

Following gene: 220917677

Centisome position: 56.6

GC content: 75.13

Gene sequence:

>780_bases
ATGGCCCGCCGCCGCCGCGAGGAGGAGCACGAGAACCACGAGCGCTGGCTGGTGTCCTACGCCGACTTCATGACCCTGCT
GTTCGCGTTCTTCGTCGTCATGTACGCGGTGTCGCGCGTGGACAACAAGCGCATCGTCCAGGCCACCGAGTCGATCCGCT
GGGCCATGCACTTCTCCGGCACCGGCGGGACCGGGGCGCTGCCGCTGTTCGACGGGCCGCCCAGCGAGGGCGGCGGGCCC
GCGCTCGAGGCCGGCACCAGCATGCGCCAGGAGCACCGCGGCATCGAGCTGCTCCGCAAGCGGATCGAGCGGCGCGTGCG
GCCGTTCGTGATGGAGCGGCGCCCGGTGCCGGTGGTGTCGGTGCTGGTGGAGGGGCGCCGGCTCACCGTCCGGCTCGCCG
CGACCGAGTTCTTCGACCCGGGCCAGGCGGCGCTCCGGCCCCAGGCGCTGGCCCTGCTCGACGCGATCGCGGTCGAGATC
GTGCCGCTCGAGCGCCCGCTCCGCGTGGAGGGGCACACCGACGAGACGCCGGTGGGCAGCGGGGGGCGGTGGATGAGCAA
CTGGGAGCTGTCGGCGACGCGCGCCGCGACGGTGGTCGGCTACCTGGAGCAGGCGCACGCGGCCCGGCCCGCCCTGCTCG
CCGCGGTCGGCCTCGGCTCCGCGCACCCGCTCTCGACCGACGCGACGCCGGAGGCGCACGAGCGCAACCGCCGCGTCGAG
CTGGTGCTCGAGCTCGACCCGCACGACGAGCTGCTCGGGGCCTCGGCCGCGGAGCGCTAG

Upstream 100 bases:

>100_bases
GCGTGCTGGAGGAGAAGCTGCGCGCCTACTCCGGGGAGCCGCCGGCCGAGCGCGACGCCGAGCCCCGGCGCAAGGCCGCG
TAGCGGCCGCTGGAGGAGCC

Downstream 100 bases:

>100_bases
CCGCGCGGCTCAGCGACACAGCCGCAGGAGCTCGGGCGGGATGGCCGGCAGCGGGAGCACGCGGTCGGCCGCGCCCAGCC
GGATGGCCTCGCGCGGCATG

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MARRRREEEHENHERWLVSYADFMTLLFAFFVVMYAVSRVDNKRIVQATESIRWAMHFSGTGGTGALPLFDGPPSEGGGP
ALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTVRLAATEFFDPGQAALRPQALALLDAIAVEI
VPLERPLRVEGHTDETPVGSGGRWMSNWELSATRAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNRRVE
LVLELDPHDELLGASAAER

Sequences:

>Translated_259_residues
MARRRREEEHENHERWLVSYADFMTLLFAFFVVMYAVSRVDNKRIVQATESIRWAMHFSGTGGTGALPLFDGPPSEGGGP
ALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTVRLAATEFFDPGQAALRPQALALLDAIAVEI
VPLERPLRVEGHTDETPVGSGGRWMSNWELSATRAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNRRVE
LVLELDPHDELLGASAAER
>Mature_258_residues
ARRRREEEHENHERWLVSYADFMTLLFAFFVVMYAVSRVDNKRIVQATESIRWAMHFSGTGGTGALPLFDGPPSEGGGPA
LEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVSVLVEGRRLTVRLAATEFFDPGQAALRPQALALLDAIAVEIV
PLERPLRVEGHTDETPVGSGGRWMSNWELSATRAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNRRVEL
VLELDPHDELLGASAAER

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=264, Percent_Identity=29.9242424242424, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 28705; Mature: 28574

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRRREEEHENHERWLVSYADFMTLLFAFFVVMYAVSRVDNKRIVQATESIRWAMHFSG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEECC
TGGTGALPLFDGPPSEGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VLVEGRRLTVRLAATEFFDPGQAALRPQALALLDAIAVEIVPLERPLRVEGHTDETPVGS
EEECCCEEEEEEEEECCCCCCHHHHCHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCCC
GGRWMSNWELSATRAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNRRVE
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEE
LVLELDPHDELLGASAAER
EEEEECCCHHHHCCCCCCC
>Mature Secondary Structure 
ARRRREEEHENHERWLVSYADFMTLLFAFFVVMYAVSRVDNKRIVQATESIRWAMHFSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEECC
TGGTGALPLFDGPPSEGGGPALEAGTSMRQEHRGIELLRKRIERRVRPFVMERRPVPVVS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VLVEGRRLTVRLAATEFFDPGQAALRPQALALLDAIAVEIVPLERPLRVEGHTDETPVGS
EEECCCEEEEEEEEECCCCCCHHHHCHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCCC
GGRWMSNWELSATRAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHERNRRVE
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEE
LVLELDPHDELLGASAAER
EEEEECCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]