| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is capA [H]
Identifier: 220917500
GI number: 220917500
Start: 2658647
End: 2660128
Strand: Direct
Name: capA [H]
Synonym: A2cp1_2400
Alternate gene names: 220917500
Gene position: 2658647-2660128 (Clockwise)
Preceding gene: 220917497
Following gene: 220917502
Centisome position: 52.86
GC content: 78.41
Gene sequence:
>1482_bases GTGACCTCGACTGTCGGCCTCCGGCGCGCCGCGCCGGTCGTAACCCTCTGTTTACTCGCGGGATGTGCGGCGGTGCCGCG CCCCTCCGCCACCGGCCCGTCCACCCCGGCGGCGTCCCCGGCGGCAGCGGGCGGCGCGCCGGTCGCGGGTGCGCTGCCTT CCAAACCCCACGCGGTCGCCGTCGCGCCAGCGGTCGCTCCACCGGTCCGGAGCGAGGCGCGCGTCACGCTCGCCGCGGTG GGCGACGTGCTCATGCACGACGCGGTGAAGCGCGCGGCCGAGGCGCGCCGCGCCGACGCGCCGGACGCGGGCTACGCGTG GCTGTTCGCGCCGGTCGCCGACCTGCTCGGCGCCGCCGACCTCACCTTCGCGAACCTGGAGACGCCCATCGCGCCGCAGG CGTCGCAGGGGTCGCGCGCCTTCGTGTTCAACGCGCCGCCCGCGGTGATCGCGGCGCTCCAGCGCGCCGGCGTGGACCTC GTCGCGGTCGCGAACAACCACGCCATGGACCAGGGCCGCCGCGGCTTCGAGGAGACCCTGCGCTGGCTCCGCGCCGCCGG CCTCCCGTACGTGGGCGCCGGGCCCGCGCCGCGCGCGGCCGGCCCGGTGCGCATCGAGCGCAACGGCCTCGCGCTCGCGT TCCTCGGCTACACCTATGGCCTGAACCAGGACGGCAACGCCTGCCCGCCCGCGGCCGCCCGCTGCGAGCAGGTGGCCGAG GTCGACCGCGCCCGCATGGTGGAGGACGTGCGCGCCGCCGCGGCGTCCGCCGACGCGGTGATCGTGTCGGTGCACTGGGG CGTCGAGTACCAGCAGGCGCCGCGCGCCGACGAGGTGGACCTGGCGCACCGGCTCGCCGACGCGGGCGCGCTGGTGGTGC TCGGCCACCACCCCCACGTGCTCCAGCCCGTGGAGCTGTACCGGCGCGCCGACGGCCGCACCGCCGTGATCGCCTACTCG CTCGGGAACTTCGTCTCCAACCAGTCGCGCAACTACGTCGCCGGGGTGACGCCCGACGCGGTGGCCGCCACCCGCGACGG CGCCCTGCTGCGCGTGTCCCTCGCGCGCCGCGACTACGGCCGCGGCGTGGAGGAGGTGGAGGTCGCCGGGGCCGACTACC TGCCGCTCTGGACCGAGAACGACACGGTGGAGATCGACCGGCGCAAGGAGCCCGCCCGCCGCCCGGCCATCCGGGTGGTG GCCGTGGACCGGGCGCTGGCGTCGGTGCGCGCCGAGCTGGCCGCGCTCCCGGACCCGCTGCCCGACGGGGAGCGCACCCG GTACGTGGCGCTCCGCCGCCGCGAGGAGCTGTACCTCGCCCGGCGCGCCGCGGTGGCCGGGGTGATGGGGGAAGACCTGC TCCGCACGCTCGGCCCGGCCGAGCTGGCCGGCACGGACGCGCCAGCGCCGTCCGCGCCCGCGCCAGCGCCGTCGGCCCGC GCGCCGGGCCCCGCGCCGGCTACTCCGTCCGCCGCGCCGTGA
Upstream 100 bases:
>100_bases CATACGCTCGCTTGCTGCGGCCCCACGGGTGGGCGTGAGATGCGTACGAACTCCGCTTTTTTCAAGCCTGCTGGGAGGAT AGCCTGCTAACGGAGGTTGC
Downstream 100 bases:
>100_bases CCGGGTGCGGGACGCCGGTGTCCGGCGGCTGCACGTCGGGCCGCGCCGGCACCTTCAGCTCGACGAGCTCGATCCCGAGC CGCTGCGCGAACTCGAAGAT
Product: enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MTSTVGLRRAAPVVTLCLLAGCAAVPRPSATGPSTPAASPAAAGGAPVAGALPSKPHAVAVAPAVAPPVRSEARVTLAAV GDVLMHDAVKRAAEARRADAPDAGYAWLFAPVADLLGAADLTFANLETPIAPQASQGSRAFVFNAPPAVIAALQRAGVDL VAVANNHAMDQGRRGFEETLRWLRAAGLPYVGAGPAPRAAGPVRIERNGLALAFLGYTYGLNQDGNACPPAAARCEQVAE VDRARMVEDVRAAAASADAVIVSVHWGVEYQQAPRADEVDLAHRLADAGALVVLGHHPHVLQPVELYRRADGRTAVIAYS LGNFVSNQSRNYVAGVTPDAVAATRDGALLRVSLARRDYGRGVEEVEVAGADYLPLWTENDTVEIDRRKEPARRPAIRVV AVDRALASVRAELAALPDPLPDGERTRYVALRRREELYLARRAAVAGVMGEDLLRTLGPAELAGTDAPAPSAPAPAPSAR APGPAPATPSAAP
Sequences:
>Translated_493_residues MTSTVGLRRAAPVVTLCLLAGCAAVPRPSATGPSTPAASPAAAGGAPVAGALPSKPHAVAVAPAVAPPVRSEARVTLAAV GDVLMHDAVKRAAEARRADAPDAGYAWLFAPVADLLGAADLTFANLETPIAPQASQGSRAFVFNAPPAVIAALQRAGVDL VAVANNHAMDQGRRGFEETLRWLRAAGLPYVGAGPAPRAAGPVRIERNGLALAFLGYTYGLNQDGNACPPAAARCEQVAE VDRARMVEDVRAAAASADAVIVSVHWGVEYQQAPRADEVDLAHRLADAGALVVLGHHPHVLQPVELYRRADGRTAVIAYS LGNFVSNQSRNYVAGVTPDAVAATRDGALLRVSLARRDYGRGVEEVEVAGADYLPLWTENDTVEIDRRKEPARRPAIRVV AVDRALASVRAELAALPDPLPDGERTRYVALRRREELYLARRAAVAGVMGEDLLRTLGPAELAGTDAPAPSAPAPAPSAR APGPAPATPSAAP >Mature_492_residues TSTVGLRRAAPVVTLCLLAGCAAVPRPSATGPSTPAASPAAAGGAPVAGALPSKPHAVAVAPAVAPPVRSEARVTLAAVG DVLMHDAVKRAAEARRADAPDAGYAWLFAPVADLLGAADLTFANLETPIAPQASQGSRAFVFNAPPAVIAALQRAGVDLV AVANNHAMDQGRRGFEETLRWLRAAGLPYVGAGPAPRAAGPVRIERNGLALAFLGYTYGLNQDGNACPPAAARCEQVAEV DRARMVEDVRAAAASADAVIVSVHWGVEYQQAPRADEVDLAHRLADAGALVVLGHHPHVLQPVELYRRADGRTAVIAYSL GNFVSNQSRNYVAGVTPDAVAATRDGALLRVSLARRDYGRGVEEVEVAGADYLPLWTENDTVEIDRRKEPARRPAIRVVA VDRALASVRAELAALPDPLPDGERTRYVALRRREELYLARRAAVAGVMGEDLLRTLGPAELAGTDAPAPSAPAPAPSARA PGPAPATPSAAP
Specific function: Seems to be required for maximum PGA (gamma-polyglutamic acid) production [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 51085; Mature: 50954
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTVGLRRAAPVVTLCLLAGCAAVPRPSATGPSTPAASPAAAGGAPVAGALPSKPHAVA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VAPAVAPPVRSEARVTLAAVGDVLMHDAVKRAAEARRADAPDAGYAWLFAPVADLLGAAD EECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC LTFANLETPIAPQASQGSRAFVFNAPPAVIAALQRAGVDLVAVANNHAMDQGRRGFEETL CEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHH RWLRAAGLPYVGAGPAPRAAGPVRIERNGLALAFLGYTYGLNQDGNACPPAAARCEQVAE HHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHH VDRARMVEDVRAAAASADAVIVSVHWGVEYQQAPRADEVDLAHRLADAGALVVLGHHPHV HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCC LQPVELYRRADGRTAVIAYSLGNFVSNQSRNYVAGVTPDAVAATRDGALLRVSLARRDYG CCHHHHHHCCCCCEEEEEEEHHHHHCCCCCCEEECCCCCHHHHCCCCCEEEEEEHHHHHC RGVEEVEVAGADYLPLWTENDTVEIDRRKEPARRPAIRVVAVDRALASVRAELAALPDPL CCHHHEEECCCCCCEEECCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCC PDGERTRYVALRRREELYLARRAAVAGVMGEDLLRTLGPAELAGTDAPAPSAPAPAPSAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC APGPAPATPSAAP CCCCCCCCCCCCC >Mature Secondary Structure TSTVGLRRAAPVVTLCLLAGCAAVPRPSATGPSTPAASPAAAGGAPVAGALPSKPHAVA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VAPAVAPPVRSEARVTLAAVGDVLMHDAVKRAAEARRADAPDAGYAWLFAPVADLLGAAD EECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC LTFANLETPIAPQASQGSRAFVFNAPPAVIAALQRAGVDLVAVANNHAMDQGRRGFEETL CEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHH RWLRAAGLPYVGAGPAPRAAGPVRIERNGLALAFLGYTYGLNQDGNACPPAAARCEQVAE HHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHH VDRARMVEDVRAAAASADAVIVSVHWGVEYQQAPRADEVDLAHRLADAGALVVLGHHPHV HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCC LQPVELYRRADGRTAVIAYSLGNFVSNQSRNYVAGVTPDAVAATRDGALLRVSLARRDYG CCHHHHHHCCCCCEEEEEEEHHHHHCCCCCCEEECCCCCHHHHCCCCCEEEEEEHHHHHC RGVEEVEVAGADYLPLWTENDTVEIDRRKEPARRPAIRVVAVDRALASVRAELAALPDPL CCHHHEEECCCCCCEEECCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCC PDGERTRYVALRRREELYLARRAAVAGVMGEDLLRTLGPAELAGTDAPAPSAPAPAPSAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC APGPAPATPSAAP CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 10486244; 11751809; 9384377 [H]