| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is ydjH [C]
Identifier: 220917416
GI number: 220917416
Start: 2567078
End: 2568022
Strand: Reverse
Name: ydjH [C]
Synonym: A2cp1_2316
Alternate gene names: 220917416
Gene position: 2568022-2567078 (Counterclockwise)
Preceding gene: 220917417
Following gene: 220917415
Centisome position: 51.06
GC content: 71.85
Gene sequence:
>945_bases ATGGCCCTGCTCGTCGTCGGCTCCGTCGCGCTCGACTCGCTCGAGACCCCCTTCGGCCGGCGCGAGGACGTGCTGGGCGG CTCCGCGTCCTACTTCTCGGCCTGCTCGAGCTTCTTCGGCCCGACGCGGCTGGTGGCCGTGGTCGGGGAGGACTTCCCCG AGGAGCACGTGCGCTTCCTGGCCGGGCGCGGCGTGGACCTGGCCGGCCTCTCGCGCGAGCCGGGCAAGACGTTCCGCTGG AAGGGGCGCTACGAGTTCGACCTCAACACGGCCCACACGCTCGACACGCAGCTCAACGTGTTCGCCGGGTTCCGGCCGGT GCTCCCGGCCAGCTTCCGGGGCTCGGAGTTCGTGTTCCTCGGCAACATCGACCCGGACCTGCAGCGCGCGGTCCTCGACC AGGTGGAGCGGCCCCGCTTCGTGGGCTGCGACACCATGAACTACTGGATCACGTCCAAGCGCCAGAGCCTGCTCGAGACG CTGAAGCGCGTGGACATGCTGTTCGTCAACGACGCGGAGGCGCGCCAGCTCGCCGGCGAGCACAACGTGGTGAAGGCGGC GCGCGCCATCCTCTCGATGGGGCCGCGCTCGCTGGTGGTGAAGCGCGGCGAGTACGGGGCGCTGTTCTTCTCGGGCGACG AGGTGTTCGCCGCCTCGGCGTTCCCGCTGCCGGAGGTGTTCGATCCGACCGGCGCGGGCGACAGCTTCGCCGGCGGGTTC ATGGGCTACCTCGCGCACCGCGGCCGCGCGGACGCCCCCACCATGCGGCGGGCCATCGTGCTCGGGAGCGTGCTGGCGAG CTTCGCCGTGGAGCAGTTCTCGCTCGACCGGCTCCGCACGCTCCGCCCGGAGGAGATCCGGGCGCGCTACGCCGAGGCGC GCGGCCTGGCCCACTTCGACGACCTCGAGAGCGATCTCTTCAACGGCGCGGCCACCCCGGGTTGA
Upstream 100 bases:
>100_bases ATCCGCGCCGGCGGGCCGCTGCGCCGTTGACCGGGACGCCCGCGGCGGGCTAGGTACGGGTCGCCCGCCGCTCCCGGCGG GCGGAAAGGCTCGATCCCGG
Downstream 100 bases:
>100_bases CCTCCGATCCGCGTGGCGGCTACCATGCGCCGCCCGGCACGGGTCGAGCATGCGCATCGGGATCATCTCCGACATCCACT CGAACCTCGAGGCCTTGACC
Product: PfkB domain-containing protein
Products: NA
Alternate protein names: Carbohydrate Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain-Containing Protein; PfkB Family Carbohydrate Kinase; Carbohydrate Kinase PfkB Family Protein; Pfkb Domain Protein; Carbohydrate/Pyrimidine Kinase PfkB Family; Ribokinase; ATP-Dependent 6-Phosphofructokinase; Carbohydrate Kinase PfkB Family; Ribokinase Family Sugar Kinase; Carbohydrate/Pyrimidine Kinase; PfkB Family Protein; Ribokinase Family; Ribokinase-Like Protein; Sugar Kinases Ribokinase Family; ATP-Dependent Phosphofructokinase; Kinase Pfkb Family; Carbohydrate Kinase PfkB/Ribokinase Family; PfkB Family Kinase; Carbohydrate/Purine Kinase; Kinase PfkB Family; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MALLVVGSVALDSLETPFGRREDVLGGSASYFSACSSFFGPTRLVAVVGEDFPEEHVRFLAGRGVDLAGLSREPGKTFRW KGRYEFDLNTAHTLDTQLNVFAGFRPVLPASFRGSEFVFLGNIDPDLQRAVLDQVERPRFVGCDTMNYWITSKRQSLLET LKRVDMLFVNDAEARQLAGEHNVVKAARAILSMGPRSLVVKRGEYGALFFSGDEVFAASAFPLPEVFDPTGAGDSFAGGF MGYLAHRGRADAPTMRRAIVLGSVLASFAVEQFSLDRLRTLRPEEIRARYAEARGLAHFDDLESDLFNGAATPG
Sequences:
>Translated_314_residues MALLVVGSVALDSLETPFGRREDVLGGSASYFSACSSFFGPTRLVAVVGEDFPEEHVRFLAGRGVDLAGLSREPGKTFRW KGRYEFDLNTAHTLDTQLNVFAGFRPVLPASFRGSEFVFLGNIDPDLQRAVLDQVERPRFVGCDTMNYWITSKRQSLLET LKRVDMLFVNDAEARQLAGEHNVVKAARAILSMGPRSLVVKRGEYGALFFSGDEVFAASAFPLPEVFDPTGAGDSFAGGF MGYLAHRGRADAPTMRRAIVLGSVLASFAVEQFSLDRLRTLRPEEIRARYAEARGLAHFDDLESDLFNGAATPG >Mature_313_residues ALLVVGSVALDSLETPFGRREDVLGGSASYFSACSSFFGPTRLVAVVGEDFPEEHVRFLAGRGVDLAGLSREPGKTFRWK GRYEFDLNTAHTLDTQLNVFAGFRPVLPASFRGSEFVFLGNIDPDLQRAVLDQVERPRFVGCDTMNYWITSKRQSLLETL KRVDMLFVNDAEARQLAGEHNVVKAARAILSMGPRSLVVKRGEYGALFFSGDEVFAASAFPLPEVFDPTGAGDSFAGGFM GYLAHRGRADAPTMRRAIVLGSVLASFAVEQFSLDRLRTLRPEEIRARYAEARGLAHFDDLESDLFNGAATPG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34415; Mature: 34284
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLVVGSVALDSLETPFGRREDVLGGSASYFSACSSFFGPTRLVAVVGEDFPEEHVRFL CEEEEEEHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHH AGRGVDLAGLSREPGKTFRWKGRYEFDLNTAHTLDTQLNVFAGFRPVLPASFRGSEFVFL HCCCCCCCCCCCCCCCCEEECCEEEEECCCCEECCCHHHHHHCCCCCCCCCCCCCEEEEE GNIDPDLQRAVLDQVERPRFVGCDTMNYWITSKRQSLLETLKRVDMLFVNDAEARQLAGE CCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHCCC HNVVKAARAILSMGPRSLVVKRGEYGALFFSGDEVFAASAFPLPEVFDPTGAGDSFAGGF HHHHHHHHHHHHCCCHHEEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHH MGYLAHRGRADAPTMRRAIVLGSVLASFAVEQFSLDRLRTLRPEEIRARYAEARGLAHFD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH DLESDLFNGAATPG HHHHHHHCCCCCCC >Mature Secondary Structure ALLVVGSVALDSLETPFGRREDVLGGSASYFSACSSFFGPTRLVAVVGEDFPEEHVRFL EEEEEEHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHH AGRGVDLAGLSREPGKTFRWKGRYEFDLNTAHTLDTQLNVFAGFRPVLPASFRGSEFVFL HCCCCCCCCCCCCCCCCEEECCEEEEECCCCEECCCHHHHHHCCCCCCCCCCCCCEEEEE GNIDPDLQRAVLDQVERPRFVGCDTMNYWITSKRQSLLETLKRVDMLFVNDAEARQLAGE CCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHCCC HNVVKAARAILSMGPRSLVVKRGEYGALFFSGDEVFAASAFPLPEVFDPTGAGDSFAGGF HHHHHHHHHHHHCCCHHEEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHH MGYLAHRGRADAPTMRRAIVLGSVLASFAVEQFSLDRLRTLRPEEIRARYAEARGLAHFD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH DLESDLFNGAATPG HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA