| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220917398
Identifier: 220917398
GI number: 220917398
Start: 2547280
End: 2548590
Strand: Reverse
Name: 220917398
Synonym: A2cp1_2298
Alternate gene names: NA
Gene position: 2548590-2547280 (Counterclockwise)
Preceding gene: 220917399
Following gene: 220917397
Centisome position: 50.67
GC content: 74.37
Gene sequence:
>1311_bases ATGGGCGAAGGCGAACACACCATCATCGGAAAGATCCCGCGCGAGCGCCTGAACCAGATCGCCTCGCGCAAGCTGTCCGC GCTCGGGATCCCCGTCCGCCTCGGCGCCGACCGCGAGACGCTCGAGGGCGAGCTCGCGTTCGCCGGCCGGGTCCAGCACC CCGTCACCGGCCAGACCATCGCCCGCGGCCGCTTCGTGGTCACCGGCCACGACCACCTCCGCTTCCTCGACGCGCCGCTC TCCGCCCTGGGCGAGGTCAACTTCTACGAGCACGAGCGGGCCACCGGGCTCGAGGTCTCGGTGGCGCAGGCGCTCGGGCG GCACGCCGCGGCGCTCCAGGACCTGGCCGCGCGCATGCGATCGCTGCGGCTGGAGACCGCGCTCGATCCGGAGCGCCTGG CGGTCCGGGCCCTGGTGAAGACCGCCACCCACGCGTTCGAGGTGCTGGGCGGGCCCGAGTCGGTGCGGGTGTCGCGCGTC GCGCCGGTGGGCGGGCGGCCGTTCGAGGTCGCGCCGGACTTCCCCGCGCTCGACCTCTCCGACTTCGCCAGCCCCACCGA CCTGGAGATCTACCTGGTCGGCTCGGTGGCGCGGATGCGGCCCGCCGCGCCGGCGCCGGCGCTCACGCCGCCGCCGACCT CCGCGCCGACGCTCGCGGCCACGCCGGCGCCGCGCAACGCGCTCACGCTCGCGGCGCTGGCGCAGGTGTTCGGCGACGAC GCCATGCTCGCGCCGAACGCCATGGTCGAGCTGGTGAAGGAGTTCGCCTACGGCAACACCCGCTACCGGTTCGTGGCCAG CAGGGAGATGGGCACCCGGTTCAAGGGGCGGGTGATCGGCCCGAACGGCGACGTCTGGTCGGACCGCTTCGAGCTGGCGA GCTTCCCCGGCACGGCCAAGGTGGTGGCGCTCGCGCTGGGCGCGGCGGATCCGGGCGCGGCTCCGGCGCCACCGCCCGGG CCGGTCGCGGTGGCCTCCGAGGTCCCGAGCCACCTCATGCCGCACCCCGGCGAGATCTGGGTGATGAGCGTGGTGGTGGA GGAGGCGGGCCCGGACGAGGTCCGCTACGTCGGCACCGACATCGACGGCCGGCCCTACGGCGCCGCGCGCGTCCTGAAGC GCTCGGACTTCGAGGCGGTGTTCGCCCAGGAGCGCGGCGGATGGCGCCTGCTCATCCAGATCGACCAGGTGCAGGACGGC AGCGTGATCTACCGGCAGCTCGATCGCCAGCGGCAGCCCATGGGCGCGCCGCGCAAGATGTCCAGCGCGATCCTCGTCGC GAACTTCGTCCCCGAGGCGGCGGCCTACTGA
Upstream 100 bases:
>100_bases GCGGATGGTCATCTCGCGGGAGATTCTGAGGTAGTCTCTCGCGCGGAAGGGGAGCGCGCCGGACGGGCGGGACGCCCGTG GCGCGCGCGCGTGGGAGACC
Downstream 100 bases:
>100_bases TGTCCTCCCCATCCATCGCGGAGCGCGTGCTCGCGGGCGAGATCCGCGCCGCCGCCCGCCTCATGCGCGACCTCGACGAC CGGCTCCCCGAGGCCGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MGEGEHTIIGKIPRERLNQIASRKLSALGIPVRLGADRETLEGELAFAGRVQHPVTGQTIARGRFVVTGHDHLRFLDAPL SALGEVNFYEHERATGLEVSVAQALGRHAAALQDLAARMRSLRLETALDPERLAVRALVKTATHAFEVLGGPESVRVSRV APVGGRPFEVAPDFPALDLSDFASPTDLEIYLVGSVARMRPAAPAPALTPPPTSAPTLAATPAPRNALTLAALAQVFGDD AMLAPNAMVELVKEFAYGNTRYRFVASREMGTRFKGRVIGPNGDVWSDRFELASFPGTAKVVALALGAADPGAAPAPPPG PVAVASEVPSHLMPHPGEIWVMSVVVEEAGPDEVRYVGTDIDGRPYGAARVLKRSDFEAVFAQERGGWRLLIQIDQVQDG SVIYRQLDRQRQPMGAPRKMSSAILVANFVPEAAAY
Sequences:
>Translated_436_residues MGEGEHTIIGKIPRERLNQIASRKLSALGIPVRLGADRETLEGELAFAGRVQHPVTGQTIARGRFVVTGHDHLRFLDAPL SALGEVNFYEHERATGLEVSVAQALGRHAAALQDLAARMRSLRLETALDPERLAVRALVKTATHAFEVLGGPESVRVSRV APVGGRPFEVAPDFPALDLSDFASPTDLEIYLVGSVARMRPAAPAPALTPPPTSAPTLAATPAPRNALTLAALAQVFGDD AMLAPNAMVELVKEFAYGNTRYRFVASREMGTRFKGRVIGPNGDVWSDRFELASFPGTAKVVALALGAADPGAAPAPPPG PVAVASEVPSHLMPHPGEIWVMSVVVEEAGPDEVRYVGTDIDGRPYGAARVLKRSDFEAVFAQERGGWRLLIQIDQVQDG SVIYRQLDRQRQPMGAPRKMSSAILVANFVPEAAAY >Mature_435_residues GEGEHTIIGKIPRERLNQIASRKLSALGIPVRLGADRETLEGELAFAGRVQHPVTGQTIARGRFVVTGHDHLRFLDAPLS ALGEVNFYEHERATGLEVSVAQALGRHAAALQDLAARMRSLRLETALDPERLAVRALVKTATHAFEVLGGPESVRVSRVA PVGGRPFEVAPDFPALDLSDFASPTDLEIYLVGSVARMRPAAPAPALTPPPTSAPTLAATPAPRNALTLAALAQVFGDDA MLAPNAMVELVKEFAYGNTRYRFVASREMGTRFKGRVIGPNGDVWSDRFELASFPGTAKVVALALGAADPGAAPAPPPGP VAVASEVPSHLMPHPGEIWVMSVVVEEAGPDEVRYVGTDIDGRPYGAARVLKRSDFEAVFAQERGGWRLLIQIDQVQDGS VIYRQLDRQRQPMGAPRKMSSAILVANFVPEAAAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46637; Mature: 46506
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGEHTIIGKIPRERLNQIASRKLSALGIPVRLGADRETLEGELAFAGRVQHPVTGQTI CCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCEEEECCCCCCCCCCEE ARGRFVVTGHDHLRFLDAPLSALGEVNFYEHERATGLEVSVAQALGRHAAALQDLAARMR CCCEEEEECCCHHEEHHHHHHHHCCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH SLRLETALDPERLAVRALVKTATHAFEVLGGPESVRVSRVAPVGGRPFEVAPDFPALDLS HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCCCCHH DFASPTDLEIYLVGSVARMRPAAPAPALTPPPTSAPTLAATPAPRNALTLAALAQVFGDD HCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCC AMLAPNAMVELVKEFAYGNTRYRFVASREMGTRFKGRVIGPNGDVWSDRFELASFPGTAK CEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHHCCCCHHE VVALALGAADPGAAPAPPPGPVAVASEVPSHLMPHPGEIWVMSVVVEEAGPDEVRYVGTD EEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCEEEEEEEEECCCCCCEEEEECC IDGRPYGAARVLKRSDFEAVFAQERGGWRLLIQIDQVQDGSVIYRQLDRQRQPMGAPRKM CCCCCCHHHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHH SSAILVANFVPEAAAY CCEEEEEECCCHHCCC >Mature Secondary Structure GEGEHTIIGKIPRERLNQIASRKLSALGIPVRLGADRETLEGELAFAGRVQHPVTGQTI CCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCEEEECCCCCCCCCCEE ARGRFVVTGHDHLRFLDAPLSALGEVNFYEHERATGLEVSVAQALGRHAAALQDLAARMR CCCEEEEECCCHHEEHHHHHHHHCCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH SLRLETALDPERLAVRALVKTATHAFEVLGGPESVRVSRVAPVGGRPFEVAPDFPALDLS HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCCCCHH DFASPTDLEIYLVGSVARMRPAAPAPALTPPPTSAPTLAATPAPRNALTLAALAQVFGDD HCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCC AMLAPNAMVELVKEFAYGNTRYRFVASREMGTRFKGRVIGPNGDVWSDRFELASFPGTAK CEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHHCCCCHHE VVALALGAADPGAAPAPPPGPVAVASEVPSHLMPHPGEIWVMSVVVEEAGPDEVRYVGTD EEEEEECCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCEEEEEEEEECCCCCCEEEEECC IDGRPYGAARVLKRSDFEAVFAQERGGWRLLIQIDQVQDGSVIYRQLDRQRQPMGAPRKM CCCCCCHHHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHH SSAILVANFVPEAAAY CCEEEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA