| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is recG [H]
Identifier: 220917310
GI number: 220917310
Start: 2452250
End: 2454964
Strand: Direct
Name: recG [H]
Synonym: A2cp1_2210
Alternate gene names: 220917310
Gene position: 2452250-2454964 (Clockwise)
Preceding gene: 220917309
Following gene: 220917311
Centisome position: 48.76
GC content: 77.97
Gene sequence:
>2715_bases GTGGAGCGCAAGCAGGGCGGCCCGGCGGATCCGCGCCAGGAGGGAGACCTCCCCGGCGCCGCCGCCGCGCGCGCGCTCGA GGCGCTGCTGCCGCCGCTCCGCTTCGCGGTGAAGGACGGCTTCGCCGGCGCGCCCCGGCTCACCGGCTTCGGCGAGACGG TGCGCGGCGCGGTCGCGCGCGCCCGCGCGGCCGGGGCCGGCGACTCGCCCGCACTGCGCCGGCTGGAGCTGGAGGCGGAG GGCTTCGACGCGCTCCCGCTCGCCGCGCGGCGCAAGGCGCTGGCGCGCATCGCCGCCGATGTCGCGGCGCTCATCCCGGT TCCCGAGGAGCTGCGCGCGCTGGCGCGGGCCGCGCGCGTCGAGGCCGAGGCGCGCCCCGGCGGCACGCCCCCGCCCGCCG CGCAGGCGGCGTCTCCGGCGCCGCCCCAGCCGCGCGCGGCGCCGCCCCGCCCGCGCGCGGCGCAGGGATCCGTCGCGCGC CCGGGACGGCAAGCCGCGCCGCCGCCCGCCGCGAGCGCCCCGCCGCCGGTGGACGCGCCCGCCCCGCGCGTCCCGCTCGC GCCGGATCCGCCCTGGCACGCGCTCCCCGAGGCGCGCACGCCGGAGGAGCGCGCCGCCCGCCGCCGCCGCCTCGCCACGC GCCTCGCCGACCTGCCGCGGGTCCACCCGGCGCCGCGGGCGCTGCTGGAGGAGCGCGGGCGCGAGACGGTGGAGGCGGCG CTGGAGCTGTGGCCGCGCGCGTACCAGGACCGCACCGCGCTGCGCCGCATCTCCGAGCTGCGGGTGGGGGACGAGGCGGC CGTGCTCGGGACCGTGAGCCACGTGCGCGTCCAGCGCATGCGCAGCGGGAAGCCCCTCCTCAAGGTCGGCGTGCAGGAGG GCGGCTCCGCGCTGGAGCTCGTGTTCTTCAACCCGCCGCCGTGGCGCCTGAAGCAGTTCGCGGCGGGCGAGTCGCTGCTC TGCTCGGGCAAGGTCACCGAGGGCTTCGGCGCGCGGCGCCAGATGAGCCAGCCGGAGGTGGAGAAGGTCCAGGCCGGCGA CTCCGCCAACTTCGGGCGCATCGTGCCCGTCTACCCGGGCCCGGCCGACTACCAGCACCCGGCGCTGCGCAAGCTGATGA AGCGCCTGGTGGACGAGCTCGTGCCCGCGGCGGTGGACGACGTGCCCGCGGAGATCCGCGCCCGCCGCGGCCTGGTCGGC CGCGCCGAGGCGCTGCGCGAGGCCCACTTCCCGCCGGCCGGCACCGACCCGCTCCACGCGGCAGAGCGGGTGACGCCGGC CTTCCGGCGGCTCGTGTTCGAGGAGCTGTTCTTCCTGCAGCTCGCGCTCGCCATGCGGCGGCGCGGGGTCCGGGCCGAGG CGGGGATCGCGTTCGACGCCTCGCCGGCGGCGCTGGCCCGCGCGGTCGAGCCGCTGCCCTTCCGGCTCACCGGCGCGCAG GAGCGCGCGCTCGCCGAGATCGCCCGGGACATGGCCGACGCCGAGCCCATGAACCGGCTGCTGCAGGGCGACGTCGGCAG CGGCAAGACCGCGGTCGCGTTCGCCGCGATGATGCTGGCGGTCCAGTCCGGCTGGCAGGCGGCGCTCATGGTGCCGACCG AGATCCTGGCCGAGCAGCACGCGCGCACGCTGTCGCGCTGGCTGGAGGGGCGCGGGGTCGAGGTGGCGCTGGTGGGCGCG AGCGCGCGCGGCAAGGGGCAGCGCGAGGCGCGGGCGGCGGTGGCGGAGGGCAGGGCGCGCATCGCGGTGGGGACGCACGC GCTGCTGGAGCAGGCGGTCGGGTTCGAGCGGCTCGGCCTGGTGGTGGTGGACGAGCAGCACCGCTTCGGCGTGATGCAGC GGGCCTCGCTCATCTCCAAGGGGCGCCGCCCGGACGTGCTGGTCATGACCGCGACGCCCATCCCCCGCACCCTGGCGCTC GCGTTCTACGGCGACCTCGACCAGTCCAAGATCTCCGAGCTGCCGCCGGGCCGCACCCCGGTGACCACGCGGCTGTTCGG CGACTCGCAGCGCAAGGCGGCCTACGCGCTCGCGCGCGGCGAGCTCGAGGCGGGCCGGCAGGTGTACGTGGTGTACCCGC TGGTGGAGGAGTCGGAGAAGACCGACCTCGCCGACGCCACCACCGGCGCGGCCGACCTGGGGAAGGTGTTCCCCGGCCAC GAGATCGGGCTGCTGCACGGGCGGATGAAGCCTGAGGAGAAGCAGCGGGTCATGGACCGCTTCCGCGCCGGCGAGGTCCA CGTGCTGGTCGCGACCACCGTCATCGAGGTGGGCGTGGACGTGCCCAACGCGAGCGTCATGATCGTCGAGCACGCCGAGC GCTTCGGCCTCTCGCAGCTGCACCAGCTCCGGGGGCGGGTGGGGCGCGGCGCGGCGAAGAGCCACTGCCTGCTGCTCGCG CACTTCCGCCGGGCCGGCGACGACGCGCGCGAGCGGCTGCGGGCCATGGAGGAGACGCAGGACGGGTTCGAGATCGCGCG GGTGGACCTGCGCATCCGCGGCCCCGGCGAGCTGCTCGGGACCCGGCAGTCCGGGCAGAAGCTGCTCGACGTCGCCGACC TCTACCGCGACGAGGCCATCCTGGAGGAGGCGCGGGAGGAGGCGTTCGGCCTGGTGGAGCGCGACGGCGACCTGGCCCGC CCCGAGCACGCCGCGGCGCGCGAGGCGCTCGCCGGCCGCTGGGCCGGGCGGCTCTCGCTGGCGCAGGTGGGCTAG
Upstream 100 bases:
>100_bases CGGCGGCGAGAAGGAGTACGAGATCCAGTCGGTCGCGTTCGTGGAGGAGGAGCTGCCGACGGAGTCCGAGTAGTCGGACC CGGCTGGTAGCCTCGCCGCC
Downstream 100 bases:
>100_bases CGCCGCGGCCGCCCCCGGCGGGCTCGCCCCGGCGGACGGCGGCGGCGCGCCACCTCGCGGGCGCGGCGCGGGAGTGCCTA GCATCGGGCGTGAGCACGGA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 904; Mature: 904
Protein sequence:
>904_residues MERKQGGPADPRQEGDLPGAAAARALEALLPPLRFAVKDGFAGAPRLTGFGETVRGAVARARAAGAGDSPALRRLELEAE GFDALPLAARRKALARIAADVAALIPVPEELRALARAARVEAEARPGGTPPPAAQAASPAPPQPRAAPPRPRAAQGSVAR PGRQAAPPPAASAPPPVDAPAPRVPLAPDPPWHALPEARTPEERAARRRRLATRLADLPRVHPAPRALLEERGRETVEAA LELWPRAYQDRTALRRISELRVGDEAAVLGTVSHVRVQRMRSGKPLLKVGVQEGGSALELVFFNPPPWRLKQFAAGESLL CSGKVTEGFGARRQMSQPEVEKVQAGDSANFGRIVPVYPGPADYQHPALRKLMKRLVDELVPAAVDDVPAEIRARRGLVG RAEALREAHFPPAGTDPLHAAERVTPAFRRLVFEELFFLQLALAMRRRGVRAEAGIAFDASPAALARAVEPLPFRLTGAQ ERALAEIARDMADAEPMNRLLQGDVGSGKTAVAFAAMMLAVQSGWQAALMVPTEILAEQHARTLSRWLEGRGVEVALVGA SARGKGQREARAAVAEGRARIAVGTHALLEQAVGFERLGLVVVDEQHRFGVMQRASLISKGRRPDVLVMTATPIPRTLAL AFYGDLDQSKISELPPGRTPVTTRLFGDSQRKAAYALARGELEAGRQVYVVYPLVEESEKTDLADATTGAADLGKVFPGH EIGLLHGRMKPEEKQRVMDRFRAGEVHVLVATTVIEVGVDVPNASVMIVEHAERFGLSQLHQLRGRVGRGAAKSHCLLLA HFRRAGDDARERLRAMEETQDGFEIARVDLRIRGPGELLGTRQSGQKLLDVADLYRDEAILEEAREEAFGLVERDGDLAR PEHAAAREALAGRWAGRLSLAQVG
Sequences:
>Translated_904_residues MERKQGGPADPRQEGDLPGAAAARALEALLPPLRFAVKDGFAGAPRLTGFGETVRGAVARARAAGAGDSPALRRLELEAE GFDALPLAARRKALARIAADVAALIPVPEELRALARAARVEAEARPGGTPPPAAQAASPAPPQPRAAPPRPRAAQGSVAR PGRQAAPPPAASAPPPVDAPAPRVPLAPDPPWHALPEARTPEERAARRRRLATRLADLPRVHPAPRALLEERGRETVEAA LELWPRAYQDRTALRRISELRVGDEAAVLGTVSHVRVQRMRSGKPLLKVGVQEGGSALELVFFNPPPWRLKQFAAGESLL CSGKVTEGFGARRQMSQPEVEKVQAGDSANFGRIVPVYPGPADYQHPALRKLMKRLVDELVPAAVDDVPAEIRARRGLVG RAEALREAHFPPAGTDPLHAAERVTPAFRRLVFEELFFLQLALAMRRRGVRAEAGIAFDASPAALARAVEPLPFRLTGAQ ERALAEIARDMADAEPMNRLLQGDVGSGKTAVAFAAMMLAVQSGWQAALMVPTEILAEQHARTLSRWLEGRGVEVALVGA SARGKGQREARAAVAEGRARIAVGTHALLEQAVGFERLGLVVVDEQHRFGVMQRASLISKGRRPDVLVMTATPIPRTLAL AFYGDLDQSKISELPPGRTPVTTRLFGDSQRKAAYALARGELEAGRQVYVVYPLVEESEKTDLADATTGAADLGKVFPGH EIGLLHGRMKPEEKQRVMDRFRAGEVHVLVATTVIEVGVDVPNASVMIVEHAERFGLSQLHQLRGRVGRGAAKSHCLLLA HFRRAGDDARERLRAMEETQDGFEIARVDLRIRGPGELLGTRQSGQKLLDVADLYRDEAILEEAREEAFGLVERDGDLAR PEHAAAREALAGRWAGRLSLAQVG >Mature_904_residues MERKQGGPADPRQEGDLPGAAAARALEALLPPLRFAVKDGFAGAPRLTGFGETVRGAVARARAAGAGDSPALRRLELEAE GFDALPLAARRKALARIAADVAALIPVPEELRALARAARVEAEARPGGTPPPAAQAASPAPPQPRAAPPRPRAAQGSVAR PGRQAAPPPAASAPPPVDAPAPRVPLAPDPPWHALPEARTPEERAARRRRLATRLADLPRVHPAPRALLEERGRETVEAA LELWPRAYQDRTALRRISELRVGDEAAVLGTVSHVRVQRMRSGKPLLKVGVQEGGSALELVFFNPPPWRLKQFAAGESLL CSGKVTEGFGARRQMSQPEVEKVQAGDSANFGRIVPVYPGPADYQHPALRKLMKRLVDELVPAAVDDVPAEIRARRGLVG RAEALREAHFPPAGTDPLHAAERVTPAFRRLVFEELFFLQLALAMRRRGVRAEAGIAFDASPAALARAVEPLPFRLTGAQ ERALAEIARDMADAEPMNRLLQGDVGSGKTAVAFAAMMLAVQSGWQAALMVPTEILAEQHARTLSRWLEGRGVEVALVGA SARGKGQREARAAVAEGRARIAVGTHALLEQAVGFERLGLVVVDEQHRFGVMQRASLISKGRRPDVLVMTATPIPRTLAL AFYGDLDQSKISELPPGRTPVTTRLFGDSQRKAAYALARGELEAGRQVYVVYPLVEESEKTDLADATTGAADLGKVFPGH EIGLLHGRMKPEEKQRVMDRFRAGEVHVLVATTVIEVGVDVPNASVMIVEHAERFGLSQLHQLRGRVGRGAAKSHCLLLA HFRRAGDDARERLRAMEETQDGFEIARVDLRIRGPGELLGTRQSGQKLLDVADLYRDEAILEEAREEAFGLVERDGDLAR PEHAAAREALAGRWAGRLSLAQVG
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=690, Percent_Identity=43.1884057971014, Blast_Score=457, Evalue=1e-129, Organism=Escherichia coli, GI1787357, Length=398, Percent_Identity=39.9497487437186, Blast_Score=261, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 97324; Mature: 97324
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKQGGPADPRQEGDLPGAAAARALEALLPPLRFAVKDGFAGAPRLTGFGETVRGAVAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH ARAAGAGDSPALRRLELEAEGFDALPLAARRKALARIAADVAALIPVPEELRALARAARV HHHCCCCCCHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EAEARPGGTPPPAAQAASPAPPQPRAAPPRPRAAQGSVARPGRQAAPPPAASAPPPVDAP HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APRVPLAPDPPWHALPEARTPEERAARRRRLATRLADLPRVHPAPRALLEERGRETVEAA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHH LELWPRAYQDRTALRRISELRVGDEAAVLGTVSHVRVQRMRSGKPLLKVGVQEGGSALEL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEE VFFNPPPWRLKQFAAGESLLCSGKVTEGFGARRQMSQPEVEKVQAGDSANFGRIVPVYPG EEECCCCHHHHHHCCCCCEEECCCCCCCCCCHHCCCCCHHHHHHCCCCCCCCEEEECCCC PADYQHPALRKLMKRLVDELVPAAVDDVPAEIRARRGLVGRAEALREAHFPPAGTDPLHA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHH AERVTPAFRRLVFEELFFLQLALAMRRRGVRAEAGIAFDASPAALARAVEPLPFRLTGAQ HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHCCCCCEEECCHH ERALAEIARDMADAEPMNRLLQGDVGSGKTAVAFAAMMLAVQSGWQAALMVPTEILAEQH HHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH ARTLSRWLEGRGVEVALVGASARGKGQREARAAVAEGRARIAVGTHALLEQAVGFERLGL HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHCCE VVVDEQHRFGVMQRASLISKGRRPDVLVMTATPIPRTLALAFYGDLDQSKISELPPGRTP EEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHCCCCCCC VTTRLFGDSQRKAAYALARGELEAGRQVYVVYPLVEESEKTDLADATTGAADLGKVFPGH CEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHCCCCHHHHHHCCCCC EIGLLHGRMKPEEKQRVMDRFRAGEVHVLVATTVIEVGVDVPNASVMIVEHAERFGLSQL CEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCEEEEECHHHCCHHHH HQLRGRVGRGAAKSHCLLLAHFRRAGDDARERLRAMEETQDGFEIARVDLRIRGPGELLG HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHC TRQSGQKLLDVADLYRDEAILEEAREEAFGLVERDGDLARPEHAAAREALAGRWAGRLSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCH AQVG HCCC >Mature Secondary Structure MERKQGGPADPRQEGDLPGAAAARALEALLPPLRFAVKDGFAGAPRLTGFGETVRGAVAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH ARAAGAGDSPALRRLELEAEGFDALPLAARRKALARIAADVAALIPVPEELRALARAARV HHHCCCCCCHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EAEARPGGTPPPAAQAASPAPPQPRAAPPRPRAAQGSVARPGRQAAPPPAASAPPPVDAP HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APRVPLAPDPPWHALPEARTPEERAARRRRLATRLADLPRVHPAPRALLEERGRETVEAA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHH LELWPRAYQDRTALRRISELRVGDEAAVLGTVSHVRVQRMRSGKPLLKVGVQEGGSALEL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEE VFFNPPPWRLKQFAAGESLLCSGKVTEGFGARRQMSQPEVEKVQAGDSANFGRIVPVYPG EEECCCCHHHHHHCCCCCEEECCCCCCCCCCHHCCCCCHHHHHHCCCCCCCCEEEECCCC PADYQHPALRKLMKRLVDELVPAAVDDVPAEIRARRGLVGRAEALREAHFPPAGTDPLHA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHH AERVTPAFRRLVFEELFFLQLALAMRRRGVRAEAGIAFDASPAALARAVEPLPFRLTGAQ HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHCCCCCEEECCHH ERALAEIARDMADAEPMNRLLQGDVGSGKTAVAFAAMMLAVQSGWQAALMVPTEILAEQH HHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH ARTLSRWLEGRGVEVALVGASARGKGQREARAAVAEGRARIAVGTHALLEQAVGFERLGL HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHCCE VVVDEQHRFGVMQRASLISKGRRPDVLVMTATPIPRTLALAFYGDLDQSKISELPPGRTP EEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHCCCCCCC VTTRLFGDSQRKAAYALARGELEAGRQVYVVYPLVEESEKTDLADATTGAADLGKVFPGH CEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHCCCCHHHHHHCCCCC EIGLLHGRMKPEEKQRVMDRFRAGEVHVLVATTVIEVGVDVPNASVMIVEHAERFGLSQL CEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCEEEEECHHHCCHHHH HQLRGRVGRGAAKSHCLLLAHFRRAGDDARERLRAMEETQDGFEIARVDLRIRGPGELLG HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHC TRQSGQKLLDVADLYRDEAILEEAREEAFGLVERDGDLARPEHAAAREALAGRWAGRLSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCH AQVG HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]