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The map label for this gene is 220917152

Identifier: 220917152

GI number: 220917152

Start: 2289027

End: 2289257

Strand: Direct

Name: 220917152

Synonym: A2cp1_2049

Alternate gene names: NA

Gene position: 2289027-2289257 (Clockwise)

Preceding gene: 220917151

Following gene: 220917153

Centisome position: 45.51

GC content: 74.03

Gene sequence:

>231_bases
ATGCGCGACCTCGTCCAGTGGCTCGCCCGCGAGCTCGTCGAGCAGAAGGACGCCGTGAGGGTGGAGGCGATCGAGCGCGA
CCGCGCGACCGTCTTCGAGCTCACGGTGGCCCCCGACGACCTCGGGCGCGTCATCGGGCGGGGCGGCAAGACCGCCAAGG
CGTTCCGGACCGTGCTCGACTGCGCGGCCCGGCGCCAGGGCCGGCGCGCGGTGCTCGACATCCTCGACTGA

Upstream 100 bases:

>100_bases
CTGGCTGAAGGCCGGCGCCAAGCCGAGCCAGACGGTCGCGATGATCCTCAAGCGGGCCGCGAAGGCGGCCGCTCCCGCCG
CGCCGAAGGCGTAAGGGTCG

Downstream 100 bases:

>100_bases
CCGTGGCGCTCGTCCGGATCGGGAAGGTGGTCCGGGCGCTCGGGCTGAAGGGCCACCTGGGCGTGGCCGGGTCGGAGGGC
GCGCTCGGGACGCTCGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MRDLVQWLARELVEQKDAVRVEAIERDRATVFELTVAPDDLGRVIGRGGKTAKAFRTVLDCAARRQGRRAVLDILD

Sequences:

>Translated_76_residues
MRDLVQWLARELVEQKDAVRVEAIERDRATVFELTVAPDDLGRVIGRGGKTAKAFRTVLDCAARRQGRRAVLDILD
>Mature_76_residues
MRDLVQWLARELVEQKDAVRVEAIERDRATVFELTVAPDDLGRVIGRGGKTAKAFRTVLDCAARRQGRRAVLDILD

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR020627 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8577; Mature: 8577

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLVQWLARELVEQKDAVRVEAIERDRATVFELTVAPDDLGRVIGRGGKTAKAFRTVLD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHH
CAARRQGRRAVLDILD
HHHHHCCCHHHHHHCC
>Mature Secondary Structure
MRDLVQWLARELVEQKDAVRVEAIERDRATVFELTVAPDDLGRVIGRGGKTAKAFRTVLD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHH
CAARRQGRRAVLDILD
HHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]