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The map label for this gene is recJ [H]

Identifier: 220916521

GI number: 220916521

Start: 1581472

End: 1583193

Strand: Direct

Name: recJ [H]

Synonym: A2cp1_1415

Alternate gene names: 220916521

Gene position: 1581472-1583193 (Clockwise)

Preceding gene: 220916519

Following gene: 220916524

Centisome position: 31.44

GC content: 78.11

Gene sequence:

>1722_bases
GTGTCGGGCGCGACCGGGAAGCGGTGGGTGGAGGCGGCGGTGGACGCGGCGCGGGCGGCGCAGCTGGCCGGCGCCCTGGA
CCTGCACCCGCTGGCCGCGCGCGTGCTGGCCGCGCGCGGCCACGCCGATCCGGCCGAGGCCGAGGCGTTCCTGGCCGCGC
GCCTCGCCGACCTGCCCGACCCGTTCCGCATGAAGGGCATGGACGCCGCCGTCGAGCGGATCGTGCGCGCGCTGGAGGGC
GGCGAGCGCATCGCCTGCTACGGCGACTACGACGTGGACGGCGTCACCTCGACCGCGCTCCTCTGCGGCTTCCTGCGCGC
GGCGGGGGCCGACGTCGTCACGTACACCCCGCACCGGCTGGTGGAGGGCTACGGCCTCAACGGCGACGCGGTCCGCAGCC
TGGCCGCGCAGGGCGTCCGCCTGCTGGTGACGCTCGACTGCGGCATCACGAGCGTGGACGAGGTGCGCGTCGCCGCCGGG
CTGGGCGTGGACACGGTGGTGGTGGACCACCACACCGTGCCGGTGGAGCTGCCCGCGGCCGCCGCCATCCTCAACCCCCA
CCAGCCCGGCTGCGCCTACCCGTCGAAGGACCTGGCCGCGGTGGGCGTGACGTTCGCGCTGGCCATGGCGCTCCGGCGCC
GGCTCCGCGAGCGGGGCCGCTTCGGCCCGGCCCGGCCCGAGCCGAACCTGAAGGAGGTGCTCGACCTCGTCGCGCTCGGC
ACGGTCGCCGACGTGGTGCCGCTCGTCGGCGCGAACCGGATCCTGGTGCGCTGGGGGCTCGAGCAGCTCGCGACCAGCCG
GCGCCCCGGCGTGCGCGCGCTGAAGCGCGTGGCCGGCATCGCGGACGGGACGCCCGTGACGGCCGGCCAGGTGGGGTTCC
GGCTCGCGCCGCGCATCAACGCCGCGGGCCGGCTCGACGACGCGGGGCGCGGGGTGCGCCTGCTGCTCTCCGGCGACGCG
GCGGCCGCGCAGGCGCTCGCGGACGAGCTGGATCGGGAGAACCAGGCCAGGCAGGAGATCGAGCGGCGCATCCTGGAGCA
GGCGCTCGCGGACGCGGCGGCGCGGGTGGCCGCCGGCGCGCGCGGGCTGGTGCTGGCCCGCGACGGCTGGCACGCCGGCG
TGGTGGGCATCGTCGCGTCGCGCGTGGTCGAGCGCTTCCACCGCCCCGCGGTGCTGGTGGCGCTGGAGGACGGCGCCGGG
AAGGGCAGCGGGCGATCGATCGAGGGCTTCCACCTCTACGACGCGCTCGCCGCGTGCTCCGGCCACCTGGCGCGCTTCGG
CGGCCACCGGCACGCCGCCGGCGTCACGGTGGAGCGGGCCCAGGTCGAGCCGTTCCGGGCCGCGTTCGAGGCGCACGCCG
CCGCCACCATCGCCGACGAGGACCTGGTGCCGCGCTGCCGGATCGACGGCTGGGTGGGCGACGCCGAGGTGACCGAGGAC
GCCGCCGAGGCGCTGGGACGGCTCGGGCCGTTCGGCGCCGGCCACCCCGAGCCGGTGTTCGCGCTGCGCGGCGCCGCGGC
GCGCGCGCGGACGGTCGGGGCGGGCGGCGCGCACCTGAAGCTCGCGCTCGGCCGCGGCCTCGATGCCATCGGCTTCGGCA
TGGGCGACCGCGCGCCGGCGTGCGGCGGGCCGGTGGACGCCGCGTTCACCATCGGCTTCGACGAGTGGGACGGCACCCGC
CGACTGCAGCTGAAGCTCAAGGACCTGCGACCGGCGCGCTGA

Upstream 100 bases:

>100_bases
GCGCGCCGCAGCGCCTGCGGGCGCGCGAGCCCTCGCGCCCGCGGCCCCGCCCCTGCGCCCGGCCGCCGCCCTGTCAGGGC
GGCGTGCTACCGAGCGGACC

Downstream 100 bases:

>100_bases
GGCGCGGCACCGCACGATCGATCGGCGAGCGCAGCGAGCCCGCCGGGACGCCGCCGCGTCCGCGGCGAAGCCGCCCGCGG
CGGCGCAAGGGACCCGGCGA

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MSGATGKRWVEAAVDAARAAQLAGALDLHPLAARVLAARGHADPAEAEAFLAARLADLPDPFRMKGMDAAVERIVRALEG
GERIACYGDYDVDGVTSTALLCGFLRAAGADVVTYTPHRLVEGYGLNGDAVRSLAAQGVRLLVTLDCGITSVDEVRVAAG
LGVDTVVVDHHTVPVELPAAAAILNPHQPGCAYPSKDLAAVGVTFALAMALRRRLRERGRFGPARPEPNLKEVLDLVALG
TVADVVPLVGANRILVRWGLEQLATSRRPGVRALKRVAGIADGTPVTAGQVGFRLAPRINAAGRLDDAGRGVRLLLSGDA
AAAQALADELDRENQARQEIERRILEQALADAAARVAAGARGLVLARDGWHAGVVGIVASRVVERFHRPAVLVALEDGAG
KGSGRSIEGFHLYDALAACSGHLARFGGHRHAAGVTVERAQVEPFRAAFEAHAAATIADEDLVPRCRIDGWVGDAEVTED
AAEALGRLGPFGAGHPEPVFALRGAAARARTVGAGGAHLKLALGRGLDAIGFGMGDRAPACGGPVDAAFTIGFDEWDGTR
RLQLKLKDLRPAR

Sequences:

>Translated_573_residues
MSGATGKRWVEAAVDAARAAQLAGALDLHPLAARVLAARGHADPAEAEAFLAARLADLPDPFRMKGMDAAVERIVRALEG
GERIACYGDYDVDGVTSTALLCGFLRAAGADVVTYTPHRLVEGYGLNGDAVRSLAAQGVRLLVTLDCGITSVDEVRVAAG
LGVDTVVVDHHTVPVELPAAAAILNPHQPGCAYPSKDLAAVGVTFALAMALRRRLRERGRFGPARPEPNLKEVLDLVALG
TVADVVPLVGANRILVRWGLEQLATSRRPGVRALKRVAGIADGTPVTAGQVGFRLAPRINAAGRLDDAGRGVRLLLSGDA
AAAQALADELDRENQARQEIERRILEQALADAAARVAAGARGLVLARDGWHAGVVGIVASRVVERFHRPAVLVALEDGAG
KGSGRSIEGFHLYDALAACSGHLARFGGHRHAAGVTVERAQVEPFRAAFEAHAAATIADEDLVPRCRIDGWVGDAEVTED
AAEALGRLGPFGAGHPEPVFALRGAAARARTVGAGGAHLKLALGRGLDAIGFGMGDRAPACGGPVDAAFTIGFDEWDGTR
RLQLKLKDLRPAR
>Mature_572_residues
SGATGKRWVEAAVDAARAAQLAGALDLHPLAARVLAARGHADPAEAEAFLAARLADLPDPFRMKGMDAAVERIVRALEGG
ERIACYGDYDVDGVTSTALLCGFLRAAGADVVTYTPHRLVEGYGLNGDAVRSLAAQGVRLLVTLDCGITSVDEVRVAAGL
GVDTVVVDHHTVPVELPAAAAILNPHQPGCAYPSKDLAAVGVTFALAMALRRRLRERGRFGPARPEPNLKEVLDLVALGT
VADVVPLVGANRILVRWGLEQLATSRRPGVRALKRVAGIADGTPVTAGQVGFRLAPRINAAGRLDDAGRGVRLLLSGDAA
AAQALADELDRENQARQEIERRILEQALADAAARVAAGARGLVLARDGWHAGVVGIVASRVVERFHRPAVLVALEDGAGK
GSGRSIEGFHLYDALAACSGHLARFGGHRHAAGVTVERAQVEPFRAAFEAHAAATIADEDLVPRCRIDGWVGDAEVTEDA
AEALGRLGPFGAGHPEPVFALRGAAARARTVGAGGAHLKLALGRGLDAIGFGMGDRAPACGGPVDAAFTIGFDEWDGTRR
LQLKLKDLRPAR

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=566, Percent_Identity=40.1060070671378, Blast_Score=329, Evalue=3e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 59756; Mature: 59625

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGATGKRWVEAAVDAARAAQLAGALDLHPLAARVLAARGHADPAEAEAFLAARLADLPD
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PFRMKGMDAAVERIVRALEGGERIACYGDYDVDGVTSTALLCGFLRAAGADVVTYTPHRL
CHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHH
VEGYGLNGDAVRSLAAQGVRLLVTLDCGITSVDEVRVAAGLGVDTVVVDHHTVPVELPAA
HHCCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCEECCCH
AAILNPHQPGCAYPSKDLAAVGVTFALAMALRRRLRERGRFGPARPEPNLKEVLDLVALG
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TVADVVPLVGANRILVRWGLEQLATSRRPGVRALKRVAGIADGTPVTAGQVGFRLAPRIN
HHHHHHHHHCCCEEEEHHCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC
AAGRLDDAGRGVRLLLSGDAAAAQALADELDRENQARQEIERRILEQALADAAARVAAGA
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RGLVLARDGWHAGVVGIVASRVVERFHRPAVLVALEDGAGKGSGRSIEGFHLYDALAACS
CCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
GHLARFGGHRHAAGVTVERAQVEPFRAAFEAHAAATIADEDLVPRCRIDGWVGDAEVTED
HHHHHHCCCCCCCCCEEEHHHCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHH
AAEALGRLGPFGAGHPEPVFALRGAAARARTVGAGGAHLKLALGRGLDAIGFGMGDRAPA
HHHHHHHCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCEEEEEECCCCCHHCCCCCCCCCC
CGGPVDAAFTIGFDEWDGTRRLQLKLKDLRPAR
CCCCCCCEEEEEECCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
SGATGKRWVEAAVDAARAAQLAGALDLHPLAARVLAARGHADPAEAEAFLAARLADLPD
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PFRMKGMDAAVERIVRALEGGERIACYGDYDVDGVTSTALLCGFLRAAGADVVTYTPHRL
CHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHH
VEGYGLNGDAVRSLAAQGVRLLVTLDCGITSVDEVRVAAGLGVDTVVVDHHTVPVELPAA
HHCCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCEECCCH
AAILNPHQPGCAYPSKDLAAVGVTFALAMALRRRLRERGRFGPARPEPNLKEVLDLVALG
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TVADVVPLVGANRILVRWGLEQLATSRRPGVRALKRVAGIADGTPVTAGQVGFRLAPRIN
HHHHHHHHHCCCEEEEHHCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCC
AAGRLDDAGRGVRLLLSGDAAAAQALADELDRENQARQEIERRILEQALADAAARVAAGA
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RGLVLARDGWHAGVVGIVASRVVERFHRPAVLVALEDGAGKGSGRSIEGFHLYDALAACS
CCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
GHLARFGGHRHAAGVTVERAQVEPFRAAFEAHAAATIADEDLVPRCRIDGWVGDAEVTED
HHHHHHCCCCCCCCCEEEHHHCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHH
AAEALGRLGPFGAGHPEPVFALRGAAARARTVGAGGAHLKLALGRGLDAIGFGMGDRAPA
HHHHHHHCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCEEEEEECCCCCHHCCCCCCCCCC
CGGPVDAAFTIGFDEWDGTRRLQLKLKDLRPAR
CCCCCCCEEEEEECCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]