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The map label for this gene is 220916439

Identifier: 220916439

GI number: 220916439

Start: 1485363

End: 1486382

Strand: Direct

Name: 220916439

Synonym: A2cp1_1333

Alternate gene names: NA

Gene position: 1485363-1486382 (Clockwise)

Preceding gene: 220916438

Following gene: 220916440

Centisome position: 29.53

GC content: 72.35

Gene sequence:

>1020_bases
ATGAGTGAATCCAGCATCTACCGGAAGCCGGTGGCGTTCGCGGCGCTCGCGACGGTCGTGGTCCTCGCCGGCACCATCGC
CACCATGGCGTACCCCATGCTCCGCCCCGACCTGCACCCGAAGGTCGAGGGGCTGAAGCCGCTCTCGCCGCTCGAGCTGG
CGGGGCGCGACGTCTACCAGCGCGAGGGCTGCGTGAACTGCCACACGCAGACCGTCCGGCCGCTCAAGAGCGAGGTGGTC
CGCTACAAGGGCAACCGCGCGCCGGAGCCGTCCGGCCAGTACTCGCTGGCGGGCGAGTTCGCCTACGACCACCCGTTCCT
GTGGGGCTCGAAGCGCACCGGCCCGGACCTCGCGTTCGAGGGCTGGATCAAGCCGTCGAAGGACTGGCACTACGCCCACT
TCGCCGACCCGCAGAAGGTGGTGCCGCGCTCCAACATGCCGAGGTACGCGTTCCTGGGCGGCAACGCGCTCGAGGCCGCG
AAGGTCCAGGCCAGCATGCGCGGGCTGCGCACGCTCGGCGTGCCGTACGGCGACGCGGACCTCGCGGCGGTGCCCGCCGC
GGTCGAGGGCAAGACCGAGCTGGACGCGCTGGTCGCGTATACCGTCTCGCTGGGCAAGGCGGTGAACCGCGCCGCGGCCG
GCGGCGGCGAGGTGGACCTCGAGGCGCCGAACCCGTTCGCGACCGACGTGGCCGCGATCGCGAAGGGGAAGGCGCTGTTC
GACGCGAACGCCTGCTCCGCCTGCCACGGCGACGAGGCGCAGGGGCAGGAGGGCGTGGCCCCGAACCTCATCGACGACAA
GTTCCTGGGCGTCTCGCCCGACCTGCCCGACGCGGCGTACTTCGCCATGATCAAGGGCGGCAGCGACGCGAAGAAGGCGC
TGGGACGGCCCGGCGTGCCGGACGGCGGCATGGCCGCGTTCGGCGGCGACCTGTCCGACGACGACATCTGGGCGATCGTC
GCGTGGCTCCGGAACCAGAAGGCGCACGAGGCGGCCGAGGGCCACCCCGGCGGCCACTAG

Upstream 100 bases:

>100_bases
GTTCGTCTACAACGTGCTCATGACCATCCGGAAGGGGAAGGTGGCGCAGGCGCAGGCCGGCGCGACCCCGACCACGGTGG
CGGCGTAGGAGGGGATGACC

Downstream 100 bases:

>100_bases
GAGATCCACCATGTCCGAAGAGCTCGACGACCTGACGAAGTTCGAGGCGAAGGACACCTCCCACACGCTGCCGGTGGGCT
GGCTGGCGCTGTTCTGGGGC

Product: bifunctional cbb3-type cytochrome c oxidase subunit II/cytochrome c

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Oxidase Cbb3-Type Subunit I; Cb-Type Cytochrome C Oxidase Subunit II; Cbb3-Type Cytochrome Oxidase Cytochrome C Subunit; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome C Oxidase; Cytochrome C Oxidase Subunit CcoO; Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cytochrome-C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/Fixo; Cytochrome-C Oxidase Subunit II; Bifunctional Cytochrome C Oxidase Subunit SccoN/O; Cytochrome-Cbb3 Oxidase Subunit I; Transmembrane Cytochrome C Oxidase FixO Protein; Cbb3-Type Cytochrome Oxidase; Cbb3-Type Cytochrome C Oxidase Subunit CcoO; Cbb3-Type Cytochrome C Oxidase Subunit I + II; Cytochrome Oxidase; Cytochrome C Oxidase Mono-Heme Subunit; Cytochrome C Oxidase Cbb3-Type; Cytochrome C Oxidase Cbb3-Type Mono-Heme Subunit II; Cytochrome Cbb3 Oxidase Subunit I/III; Cytochrome Oxidase Cytochrome C Subunit; Cytochrome C Oxidase Family Protein; Cytochrome C Oxidase Subunit CcoN; Cytochrome C Oxidase Cbb3-Type Subunit I/Mono-Heme Subunit; Cytochrome C Oxidase FixO Chain; Cytochrome-Cbb3 Oxidase Subunit II; Cytochrome C Oxidase CcoO Subunit; Cytochrome Cbb3 Oxidase Diheme Subunit; Cbb3-Type Cytochrome C Oxidase Subunits CcoN/CcoO; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSESSIYRKPVAFAALATVVVLAGTIATMAYPMLRPDLHPKVEGLKPLSPLELAGRDVYQREGCVNCHTQTVRPLKSEVV
RYKGNRAPEPSGQYSLAGEFAYDHPFLWGSKRTGPDLAFEGWIKPSKDWHYAHFADPQKVVPRSNMPRYAFLGGNALEAA
KVQASMRGLRTLGVPYGDADLAAVPAAVEGKTELDALVAYTVSLGKAVNRAAAGGGEVDLEAPNPFATDVAAIAKGKALF
DANACSACHGDEAQGQEGVAPNLIDDKFLGVSPDLPDAAYFAMIKGGSDAKKALGRPGVPDGGMAAFGGDLSDDDIWAIV
AWLRNQKAHEAAEGHPGGH

Sequences:

>Translated_339_residues
MSESSIYRKPVAFAALATVVVLAGTIATMAYPMLRPDLHPKVEGLKPLSPLELAGRDVYQREGCVNCHTQTVRPLKSEVV
RYKGNRAPEPSGQYSLAGEFAYDHPFLWGSKRTGPDLAFEGWIKPSKDWHYAHFADPQKVVPRSNMPRYAFLGGNALEAA
KVQASMRGLRTLGVPYGDADLAAVPAAVEGKTELDALVAYTVSLGKAVNRAAAGGGEVDLEAPNPFATDVAAIAKGKALF
DANACSACHGDEAQGQEGVAPNLIDDKFLGVSPDLPDAAYFAMIKGGSDAKKALGRPGVPDGGMAAFGGDLSDDDIWAIV
AWLRNQKAHEAAEGHPGGH
>Mature_338_residues
SESSIYRKPVAFAALATVVVLAGTIATMAYPMLRPDLHPKVEGLKPLSPLELAGRDVYQREGCVNCHTQTVRPLKSEVVR
YKGNRAPEPSGQYSLAGEFAYDHPFLWGSKRTGPDLAFEGWIKPSKDWHYAHFADPQKVVPRSNMPRYAFLGGNALEAAK
VQASMRGLRTLGVPYGDADLAAVPAAVEGKTELDALVAYTVSLGKAVNRAAAGGGEVDLEAPNPFATDVAAIAKGKALFD
ANACSACHGDEAQGQEGVAPNLIDDKFLGVSPDLPDAAYFAMIKGGSDAKKALGRPGVPDGGMAAFGGDLSDDDIWAIVA
WLRNQKAHEAAEGHPGGH

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 35806; Mature: 35675

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESSIYRKPVAFAALATVVVLAGTIATMAYPMLRPDLHPKVEGLKPLSPLELAGRDVYQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHH
REGCVNCHTQTVRPLKSEVVRYKGNRAPEPSGQYSLAGEFAYDHPFLWGSKRTGPDLAFE
HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCEEE
GWIKPSKDWHYAHFADPQKVVPRSNMPRYAFLGGNALEAAKVQASMRGLRTLGVPYGDAD
CCCCCCCCCCEEECCCHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
LAAVPAAVEGKTELDALVAYTVSLGKAVNRAAAGGGEVDLEAPNPFATDVAAIAKGKALF
HHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEE
DANACSACHGDEAQGQEGVAPNLIDDKFLGVSPDLPDAAYFAMIKGGSDAKKALGRPGVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCC
DGGMAAFGGDLSDDDIWAIVAWLRNQKAHEAAEGHPGGH
CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCC
>Mature Secondary Structure 
SESSIYRKPVAFAALATVVVLAGTIATMAYPMLRPDLHPKVEGLKPLSPLELAGRDVYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHH
REGCVNCHTQTVRPLKSEVVRYKGNRAPEPSGQYSLAGEFAYDHPFLWGSKRTGPDLAFE
HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCCEEE
GWIKPSKDWHYAHFADPQKVVPRSNMPRYAFLGGNALEAAKVQASMRGLRTLGVPYGDAD
CCCCCCCCCCEEECCCHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC
LAAVPAAVEGKTELDALVAYTVSLGKAVNRAAAGGGEVDLEAPNPFATDVAAIAKGKALF
HHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEE
DANACSACHGDEAQGQEGVAPNLIDDKFLGVSPDLPDAAYFAMIKGGSDAKKALGRPGVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCC
DGGMAAFGGDLSDDDIWAIVAWLRNQKAHEAAEGHPGGH
CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA