Click here to switch to the map view.

The map label for this gene is fixN [H]

Identifier: 220916438

GI number: 220916438

Start: 1483929

End: 1485350

Strand: Direct

Name: fixN [H]

Synonym: A2cp1_1332

Alternate gene names: 220916438

Gene position: 1483929-1485350 (Clockwise)

Preceding gene: 220916437

Following gene: 220916439

Centisome position: 29.51

GC content: 65.05

Gene sequence:

>1422_bases
ATGAACGACTATCGGTACGACTACCAGACCGTCCAGGGGTTCATCCTCTCGGCGATGTTCTGGGGCGTCGTCGGGATCCT
GCTCGGGCTCCTCATCAGCGTGCAGCTGTGGGCGCCCGCCGCGAACTTCGCGCCGTACCTGACCTACGGCCGGCTGCGCC
CGGTGCACACCAACGGCCTGATCTTCGGCCTGGGCGCGGGCGCCATCTTCGGCCTCTTCTATTACATCACCATGCGGCTC
TGTAAGCGGCCGCTGCTGTTCCCGCGCCTGGCGCGCGTGCAGCTGTGGCTCTTCAACGTCGGCATCGTCGCCGCCGCGGT
CACGCTGCTGCTCGGCCAGACCCAGTCGCTCGAGTACGCCGAGCTGGAGTGGCCGCTCGACCTCGCCATCGTGGTGCTGT
GGGTGATGCTGGCGGTGAACGTCTTCGGGACGATCCTGAAGCGGCGCGAGGAGCAGATGTACGTGTCGCTCTGGTACATC
GTTGCGACGGTCATCACCATCGCGATCCTCTACGTCGTCAACAACCTCGCGGTGCCGGTGAGCCTGGGCAAGAGCTACCC
GCTGTTCGCCGGGGTGAACTCCGCCAACGTGCAGTGGTGGTACGGGCACAACGCGGTCGGCTTCCTGCTCACCACGCCGA
TCCTGGCGATGTTCTACTACTTCCTCCCGAAGTCCACCGGGCTGCCCATCTACAGCCACCGGCTCTCCATCGTCGCGTTC
TGGTCGCTGATCTTCGCGTACCTGTGGACCGGCGCGCACCACCTCGTCTACACGCCGCTGCCGGACTGGATCCAGACGCT
CGCCATCGTGTTCACGATGTTCCTCATCGCGCCGTCGTGGGGCTCGGTCGTGAACGGCTACTACACGGTGGGCCAGGACT
GGACGAAGGTGCGGTCGAACTACCTGACCAAGTTCTTCATCCTGGGCATCACGTTCTACGGCCTGCAGACGGTGCAGGGG
CCGACGCAGGGGCTCCGCGTCGTGTCGCAGCTCATCCACTACACCGACTGGGTCCCCGGCCACGTGCACATGGGCACGAT
GGGCTGGGTGACCATGATCATCTGCGCGTCGATCTACTACGTGGTGCCGCGCATCAACGGCACCGAGCTGTACTCGGAGA
AGCTCGCCAACGTGCACTTCTGGCTGGTGCTCGTCGGCCAGCTCCTGTTCTCGATCACGATGTGGATCACCGGCATCCGG
CAGGGCTGGATGTGGAAGGCCACCGACGAGGCCGGCAAGCTCCAGTACACGTTCATGGACGGGGTGATCGGGAACTATCC
GTACTGGCACACGCGCACGCTGGCCGGGATCATCTTCGCCGCGGGCATGGTGGTGTTCGTCTACAACGTGCTCATGACCA
TCCGGAAGGGGAAGGTGGCGCAGGCGCAGGCCGGCGCGACCCCGACCACGGTGGCGGCGTAG

Upstream 100 bases:

>100_bases
GGCACCAGGAAGGGTAGAGGCTCCCCATTTTTGCCGATCGGACGCCCTCTCCTGTATCTTGCGCGCGATCATTTCCCGTT
TCTCGGGAAGGAATGGGCAC

Downstream 100 bases:

>100_bases
GAGGGGATGACCATGAGTGAATCCAGCATCTACCGGAAGCCGGTGGCGTTCGCGGCGCTCGCGACGGTCGTGGTCCTCGC
CGGCACCATCGCCACCATGG

Product: cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome c oxidase polypeptide I homolog [H]

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MNDYRYDYQTVQGFILSAMFWGVVGILLGLLISVQLWAPAANFAPYLTYGRLRPVHTNGLIFGLGAGAIFGLFYYITMRL
CKRPLLFPRLARVQLWLFNVGIVAAAVTLLLGQTQSLEYAELEWPLDLAIVVLWVMLAVNVFGTILKRREEQMYVSLWYI
VATVITIAILYVVNNLAVPVSLGKSYPLFAGVNSANVQWWYGHNAVGFLLTTPILAMFYYFLPKSTGLPIYSHRLSIVAF
WSLIFAYLWTGAHHLVYTPLPDWIQTLAIVFTMFLIAPSWGSVVNGYYTVGQDWTKVRSNYLTKFFILGITFYGLQTVQG
PTQGLRVVSQLIHYTDWVPGHVHMGTMGWVTMIICASIYYVVPRINGTELYSEKLANVHFWLVLVGQLLFSITMWITGIR
QGWMWKATDEAGKLQYTFMDGVIGNYPYWHTRTLAGIIFAAGMVVFVYNVLMTIRKGKVAQAQAGATPTTVAA

Sequences:

>Translated_473_residues
MNDYRYDYQTVQGFILSAMFWGVVGILLGLLISVQLWAPAANFAPYLTYGRLRPVHTNGLIFGLGAGAIFGLFYYITMRL
CKRPLLFPRLARVQLWLFNVGIVAAAVTLLLGQTQSLEYAELEWPLDLAIVVLWVMLAVNVFGTILKRREEQMYVSLWYI
VATVITIAILYVVNNLAVPVSLGKSYPLFAGVNSANVQWWYGHNAVGFLLTTPILAMFYYFLPKSTGLPIYSHRLSIVAF
WSLIFAYLWTGAHHLVYTPLPDWIQTLAIVFTMFLIAPSWGSVVNGYYTVGQDWTKVRSNYLTKFFILGITFYGLQTVQG
PTQGLRVVSQLIHYTDWVPGHVHMGTMGWVTMIICASIYYVVPRINGTELYSEKLANVHFWLVLVGQLLFSITMWITGIR
QGWMWKATDEAGKLQYTFMDGVIGNYPYWHTRTLAGIIFAAGMVVFVYNVLMTIRKGKVAQAQAGATPTTVAA
>Mature_473_residues
MNDYRYDYQTVQGFILSAMFWGVVGILLGLLISVQLWAPAANFAPYLTYGRLRPVHTNGLIFGLGAGAIFGLFYYITMRL
CKRPLLFPRLARVQLWLFNVGIVAAAVTLLLGQTQSLEYAELEWPLDLAIVVLWVMLAVNVFGTILKRREEQMYVSLWYI
VATVITIAILYVVNNLAVPVSLGKSYPLFAGVNSANVQWWYGHNAVGFLLTTPILAMFYYFLPKSTGLPIYSHRLSIVAF
WSLIFAYLWTGAHHLVYTPLPDWIQTLAIVFTMFLIAPSWGSVVNGYYTVGQDWTKVRSNYLTKFFILGITFYGLQTVQG
PTQGLRVVSQLIHYTDWVPGHVHMGTMGWVTMIICASIYYVVPRINGTELYSEKLANVHFWLVLVGQLLFSITMWITGIR
QGWMWKATDEAGKLQYTFMDGVIGNYPYWHTRTLAGIIFAAGMVVFVYNVLMTIRKGKVAQAQAGATPTTVAA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 53361; Mature: 53361

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYRYDYQTVQGFILSAMFWGVVGILLGLLISVQLWAPAANFAPYLTYGRLRPVHTNGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEECCCE
IFGLGAGAIFGLFYYITMRLCKRPLLFPRLARVQLWLFNVGIVAAAVTLLLGQTQSLEYA
EEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ELEWPLDLAIVVLWVMLAVNVFGTILKRREEQMYVSLWYIVATVITIAILYVVNNLAVPV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
SLGKSYPLFAGVNSANVQWWYGHNAVGFLLTTPILAMFYYFLPKSTGLPIYSHRLSIVAF
ECCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
WSLIFAYLWTGAHHLVYTPLPDWIQTLAIVFTMFLIAPSWGSVVNGYYTVGQDWTKVRSN
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCHHHHHHH
YLTKFFILGITFYGLQTVQGPTQGLRVVSQLIHYTDWVPGHVHMGTMGWVTMIICASIYY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHH
VVPRINGTELYSEKLANVHFWLVLVGQLLFSITMWITGIRQGWMWKATDEAGKLQYTFMD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEC
GVIGNYPYWHTRTLAGIIFAAGMVVFVYNVLMTIRKGKVAQAQAGATPTTVAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MNDYRYDYQTVQGFILSAMFWGVVGILLGLLISVQLWAPAANFAPYLTYGRLRPVHTNGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEECCCE
IFGLGAGAIFGLFYYITMRLCKRPLLFPRLARVQLWLFNVGIVAAAVTLLLGQTQSLEYA
EEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ELEWPLDLAIVVLWVMLAVNVFGTILKRREEQMYVSLWYIVATVITIAILYVVNNLAVPV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
SLGKSYPLFAGVNSANVQWWYGHNAVGFLLTTPILAMFYYFLPKSTGLPIYSHRLSIVAF
ECCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
WSLIFAYLWTGAHHLVYTPLPDWIQTLAIVFTMFLIAPSWGSVVNGYYTVGQDWTKVRSN
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCHHHHHHH
YLTKFFILGITFYGLQTVQGPTQGLRVVSQLIHYTDWVPGHVHMGTMGWVTMIICASIYY
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHH
VVPRINGTELYSEKLANVHFWLVLVGQLLFSITMWITGIRQGWMWKATDEAGKLQYTFMD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEC
GVIGNYPYWHTRTLAGIIFAAGMVVFVYNVLMTIRKGKVAQAQAGATPTTVAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7753030 [H]