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The map label for this gene is ycjS [H]

Identifier: 220916298

GI number: 220916298

Start: 1334716

End: 1335729

Strand: Direct

Name: ycjS [H]

Synonym: A2cp1_1191

Alternate gene names: 220916298

Gene position: 1334716-1335729 (Clockwise)

Preceding gene: 220916297

Following gene: 220916299

Centisome position: 26.54

GC content: 77.02

Gene sequence:

>1014_bases
ATGATCGCGTACCCCTCGGCCAGCCCGGCGCGCCCGCGGCTCGGCTTCCTCGGCGTCGGCTGGATCGGCCGGCACCGCCT
GCGCGCCATCCTCGAGTCCGGCGCGGCCACCGCGGCCGCGCTCGCCGACCCGAGCGCCGCCGCGGCCCGGGAGGCCGCCT
CCGCGCTGGACGGCTGCCTGGTGGTCCCCGACCTGGACGCGCTGCTCGACCTGGGCGTGGACGGCGTGGTGATCGCCACG
CCCTCGGCGCTGCACGCGGAGCAGGCGGTGCGGGCGCTCCGTCGCGGGGTGGCGGTGTTCTGCCAGAAGCCGCTCGCGCG
CACCGCCCCGGAGGCGCGGCGGGTGGTCGAGGCGGCGCGCGCCGCCGACCGGCTGCTCGGCGTCGATCTCTCCTACCGCC
ACGTGGCGGGCATGGACCAGGTACGCGCGCTGGTGGCGGAGGGCGCGCTCGGCGAGGTGTACGCGGCGCACCTCTCCTTC
CACAACGCGTACGGGCCGGACAAGCCCTGGTTCTACGACGCGCGCCTCTCGGGCGGCGGCTGCCTGGTGGACCTCGGCAT
CCACCTGGTGGACCTGGCGCTGTGGACGCTGGGCGAGCCGGGGGTGGACACGGTGAGCGCGACGCTGCGCTCGGGCGGGA
AGCGGCTGCGCGGGCGCGAGAGCGGGCTGGTGGAGGACTACGCCGCCGCGCAGCTCGAGCTGGGGAACGGCACCGCGGTC
CAGCTCTCCTGCTCCTGGCGCCTCTCGGCCGGCCAGGACTGCGCCATCGAGGCCGCGTTCTACGGCACCAAGGGCGGCGC
GGCGCTCCGCAACGTCCACGGGTCCTTCTACGACTTCCTGGTGGAGCGCTTCCACGGCACGCGGCGCGAGCTGCTGGCCG
GCCCGCCCGACGCGTGGGGCGGCCGGGCCGCGGTGGCCTGGGCGCGCGCGCTCGCCGCCGGCGGGCGCTACGACCCGGCG
GTCGAGTCGATCCTCGACGTCCAGGCCACCCTGGACCGGATCTACGAGGCGTGA

Upstream 100 bases:

>100_bases
CCGGGCCGCTCTACCGGAGCTTCCCGCTCGACCGGCTCGCCGACGCATTCCAGGCGATGGAGGAGCGGCCGGACGGCTTC
GTGAAGGCCCTCGTCACCCC

Downstream 100 bases:

>100_bases
CCCATCGTGAAGGTCCTCCTGCACGCCGACGCGGTGGGGGGCGTCCTCACCTACGCGCTGGAGCTCTCGGCGGCGCTGGC
GGCCCGCGGCGTCGAGGTGG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MIAYPSASPARPRLGFLGVGWIGRHRLRAILESGAATAAALADPSAAAAREAASALDGCLVVPDLDALLDLGVDGVVIAT
PSALHAEQAVRALRRGVAVFCQKPLARTAPEARRVVEAARAADRLLGVDLSYRHVAGMDQVRALVAEGALGEVYAAHLSF
HNAYGPDKPWFYDARLSGGGCLVDLGIHLVDLALWTLGEPGVDTVSATLRSGGKRLRGRESGLVEDYAAAQLELGNGTAV
QLSCSWRLSAGQDCAIEAAFYGTKGGAALRNVHGSFYDFLVERFHGTRRELLAGPPDAWGGRAAVAWARALAAGGRYDPA
VESILDVQATLDRIYEA

Sequences:

>Translated_337_residues
MIAYPSASPARPRLGFLGVGWIGRHRLRAILESGAATAAALADPSAAAAREAASALDGCLVVPDLDALLDLGVDGVVIAT
PSALHAEQAVRALRRGVAVFCQKPLARTAPEARRVVEAARAADRLLGVDLSYRHVAGMDQVRALVAEGALGEVYAAHLSF
HNAYGPDKPWFYDARLSGGGCLVDLGIHLVDLALWTLGEPGVDTVSATLRSGGKRLRGRESGLVEDYAAAQLELGNGTAV
QLSCSWRLSAGQDCAIEAAFYGTKGGAALRNVHGSFYDFLVERFHGTRRELLAGPPDAWGGRAAVAWARALAAGGRYDPA
VESILDVQATLDRIYEA
>Mature_337_residues
MIAYPSASPARPRLGFLGVGWIGRHRLRAILESGAATAAALADPSAAAAREAASALDGCLVVPDLDALLDLGVDGVVIAT
PSALHAEQAVRALRRGVAVFCQKPLARTAPEARRVVEAARAADRLLGVDLSYRHVAGMDQVRALVAEGALGEVYAAHLSF
HNAYGPDKPWFYDARLSGGGCLVDLGIHLVDLALWTLGEPGVDTVSATLRSGGKRLRGRESGLVEDYAAAQLELGNGTAV
QLSCSWRLSAGQDCAIEAAFYGTKGGAALRNVHGSFYDFLVERFHGTRRELLAGPPDAWGGRAAVAWARALAAGGRYDPA
VESILDVQATLDRIYEA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=215, Percent_Identity=32.093023255814, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI87082405, Length=150, Percent_Identity=31.3333333333333, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI145693182, Length=221, Percent_Identity=25.7918552036199, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35402; Mature: 35402

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAYPSASPARPRLGFLGVGWIGRHRLRAILESGAATAAALADPSAAAAREAASALDGCL
CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCEE
VVPDLDALLDLGVDGVVIATPSALHAEQAVRALRRGVAVFCQKPLARTAPEARRVVEAAR
ECCCHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH
AADRLLGVDLSYRHVAGMDQVRALVAEGALGEVYAAHLSFHNAYGPDKPWFYDARLSGGG
HHHHHHCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
CLVDLGIHLVDLALWTLGEPGVDTVSATLRSGGKRLRGRESGLVEDYAAAQLELGNGTAV
EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHCCCCCCCHHHHHHHEEECCCCCEE
QLSCSWRLSAGQDCAIEAAFYGTKGGAALRNVHGSFYDFLVERFHGTRRELLAGPPDAWG
EEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
GRAAVAWARALAAGGRYDPAVESILDVQATLDRIYEA
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAYPSASPARPRLGFLGVGWIGRHRLRAILESGAATAAALADPSAAAAREAASALDGCL
CCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCEE
VVPDLDALLDLGVDGVVIATPSALHAEQAVRALRRGVAVFCQKPLARTAPEARRVVEAAR
ECCCHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH
AADRLLGVDLSYRHVAGMDQVRALVAEGALGEVYAAHLSFHNAYGPDKPWFYDARLSGGG
HHHHHHCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
CLVDLGIHLVDLALWTLGEPGVDTVSATLRSGGKRLRGRESGLVEDYAAAQLELGNGTAV
EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHCCCCCCCHHHHHHHEEECCCCCEE
QLSCSWRLSAGQDCAIEAAFYGTKGGAALRNVHGSFYDFLVERFHGTRRELLAGPPDAWG
EEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
GRAAVAWARALAAGGRYDPAVESILDVQATLDRIYEA
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]