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The map label for this gene is virB10 [H]

Identifier: 220916251

GI number: 220916251

Start: 1275826

End: 1277016

Strand: Direct

Name: virB10 [H]

Synonym: A2cp1_1144

Alternate gene names: 220916251

Gene position: 1275826-1277016 (Clockwise)

Preceding gene: 220916250

Following gene: 220916252

Centisome position: 25.37

GC content: 73.38

Gene sequence:

>1191_bases
ATGGCGGAGACCATCGTCGATGCGGCGGTGGAGCTGGAGAAGCGCGAGCGGGAGCGGGCGCGCGCCGAGGAGGCGGCGCC
GGACGTCGAGGGGGCGCGCGGGAAGGCGCTCCTCGCGGGCGCCCGGCGGCAGTGGCCGGTTGGGGCGCGGACGTTCTTCG
TCGTCACCGGGCTCGTGGCGGTTGGGCTCATCTCCGTGCTGCTTCTCAAGGCGCGCTCCGCGCGGAGGGAGGCCGAGGCG
CGCGAGCACGAGAGCCCGGCGAAGACCGAGAGGGTTGAGCGCCACGTGCCGCCGCTGGAGCTCGCCGCTCAGGCGCCCGT
TCCGCTGCAGGCGCCACCTGCGGCGGTCGCCGTAGGTGCGGGTGGCGACGCCCCCGGGGCCATCGCGAGCCCGGAAGCGG
AACTCGTCCAGCGCCGCCTCTCGCGCGGCTTCGGAGCGGGGGAGGGCGATGGAGGCCCCCGCGAGCAAGCCTCCTCGGCC
GCGCCGCACCAGTCGCTCGCACCCGACGGTGCGCCGGCGGTGCCGAGAAGGCCGGGCGGGCTGGAGGAGAAGCTGGAGGC
GGTGGAGCTCAGGGCCGCCGCGGCGGACGTCCTTCCCGATCGCGATCACATCCTCACGCAGGGCGCGATGCTGGACTGCG
TTCTGGAGACGAGGATCGTCTCGACCGTCGCGGGCATGACGTCGTGCCACCTGACTCGCGACGTCTACTCGACGAGCGGC
CGGGTCGTGTTGCTCGACCGCGGCTCCCGCGTCGTCGGGCGTTACCAGGGCGGCATGCAGCAGGGCGACACGCGCGTCTT
CGTCCTCTGGATGCGCGTCGAGACGCCGGCCGGCGTAGTCGTCGAGCTCCAGTCGCCGGGGGCGGGGCCGCTGGGCGAGG
CGGGGCTGGGCGGCCACGTCGACACGCGATTCTGGGACCGGTTTGGCGCGGCCGTCCTCCTCAGCGTCATCGAGGACGGT
GTGGACGCGGCTGCGGCGCGCGCCGCAGGGACGGCGCAGGGTACGAGCATCAACGTCGGGAACACCGCGAACGCGGGGAA
GGAGGTCATCGCGCGGTCGATGGAGCCGACCATCAACATCCCGCCGCTGCTCGTAAAGAACCAGGGGGAGCGGGTCGGGA
TCTTCGTCGCGCGGGACCTCGACTTCAGGAGTGTCTATGGGCTGGAGCGCTTCACCCGCACCGGACGGTAG

Upstream 100 bases:

>100_bases
GCGCGCTCGCCATATGGAACGACGCGTACGACCCCGGGGGACGACGGAACGTGAGCCGGACGGCCTCGCCGGACGTGAAC
CGCGTGCTCTGGAGGTAGCC

Downstream 100 bases:

>100_bases
CAGGCCGCCACGCAACACGGCGCTCCGTCAGCTCCTGCGCCCGCTCGAGCCTTACCTCGCGCGGCGCGAGGTGACGGAGC
TGGCGGTGAACCGCCCCGGA

Product: conjugation TrbI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MAETIVDAAVELEKRERERARAEEAAPDVEGARGKALLAGARRQWPVGARTFFVVTGLVAVGLISVLLLKARSARREAEA
REHESPAKTERVERHVPPLELAAQAPVPLQAPPAAVAVGAGGDAPGAIASPEAELVQRRLSRGFGAGEGDGGPREQASSA
APHQSLAPDGAPAVPRRPGGLEEKLEAVELRAAAADVLPDRDHILTQGAMLDCVLETRIVSTVAGMTSCHLTRDVYSTSG
RVVLLDRGSRVVGRYQGGMQQGDTRVFVLWMRVETPAGVVVELQSPGAGPLGEAGLGGHVDTRFWDRFGAAVLLSVIEDG
VDAAAARAAGTAQGTSINVGNTANAGKEVIARSMEPTINIPPLLVKNQGERVGIFVARDLDFRSVYGLERFTRTGR

Sequences:

>Translated_396_residues
MAETIVDAAVELEKRERERARAEEAAPDVEGARGKALLAGARRQWPVGARTFFVVTGLVAVGLISVLLLKARSARREAEA
REHESPAKTERVERHVPPLELAAQAPVPLQAPPAAVAVGAGGDAPGAIASPEAELVQRRLSRGFGAGEGDGGPREQASSA
APHQSLAPDGAPAVPRRPGGLEEKLEAVELRAAAADVLPDRDHILTQGAMLDCVLETRIVSTVAGMTSCHLTRDVYSTSG
RVVLLDRGSRVVGRYQGGMQQGDTRVFVLWMRVETPAGVVVELQSPGAGPLGEAGLGGHVDTRFWDRFGAAVLLSVIEDG
VDAAAARAAGTAQGTSINVGNTANAGKEVIARSMEPTINIPPLLVKNQGERVGIFVARDLDFRSVYGLERFTRTGR
>Mature_395_residues
AETIVDAAVELEKRERERARAEEAAPDVEGARGKALLAGARRQWPVGARTFFVVTGLVAVGLISVLLLKARSARREAEAR
EHESPAKTERVERHVPPLELAAQAPVPLQAPPAAVAVGAGGDAPGAIASPEAELVQRRLSRGFGAGEGDGGPREQASSAA
PHQSLAPDGAPAVPRRPGGLEEKLEAVELRAAAADVLPDRDHILTQGAMLDCVLETRIVSTVAGMTSCHLTRDVYSTSGR
VVLLDRGSRVVGRYQGGMQQGDTRVFVLWMRVETPAGVVVELQSPGAGPLGEAGLGGHVDTRFWDRFGAAVLLSVIEDGV
DAAAARAAGTAQGTSINVGNTANAGKEVIARSMEPTINIPPLLVKNQGERVGIFVARDLDFRSVYGLERFTRTGR

Specific function: The virB system could be required for the establishment of the replication niche in the host [H]

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 41642; Mature: 41511

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETIVDAAVELEKRERERARAEEAAPDVEGARGKALLAGARRQWPVGARTFFVVTGLVA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
VGLISVLLLKARSARREAEAREHESPAKTERVERHVPPLELAAQAPVPLQAPPAAVAVGA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEECC
GGDAPGAIASPEAELVQRRLSRGFGAGEGDGGPREQASSAAPHQSLAPDGAPAVPRRPGG
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
LEEKLEAVELRAAAADVLPDRDHILTQGAMLDCVLETRIVSTVAGMTSCHLTRDVYSTSG
HHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RVVLLDRGSRVVGRYQGGMQQGDTRVFVLWMRVETPAGVVVELQSPGAGPLGEAGLGGHV
CEEEEECCCEEEHHHCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
DTRFWDRFGAAVLLSVIEDGVDAAAARAAGTAQGTSINVGNTANAGKEVIARSMEPTINI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCC
PPLLVKNQGERVGIFVARDLDFRSVYGLERFTRTGR
CCEEECCCCCEEEEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AETIVDAAVELEKRERERARAEEAAPDVEGARGKALLAGARRQWPVGARTFFVVTGLVA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
VGLISVLLLKARSARREAEAREHESPAKTERVERHVPPLELAAQAPVPLQAPPAAVAVGA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEECC
GGDAPGAIASPEAELVQRRLSRGFGAGEGDGGPREQASSAAPHQSLAPDGAPAVPRRPGG
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
LEEKLEAVELRAAAADVLPDRDHILTQGAMLDCVLETRIVSTVAGMTSCHLTRDVYSTSG
HHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RVVLLDRGSRVVGRYQGGMQQGDTRVFVLWMRVETPAGVVVELQSPGAGPLGEAGLGGHV
CEEEEECCCEEEHHHCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
DTRFWDRFGAAVLLSVIEDGVDAAAARAAGTAQGTSINVGNTANAGKEVIARSMEPTINI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCC
PPLLVKNQGERVGIFVARDLDFRSVYGLERFTRTGR
CCEEECCCCCEEEEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11830669; 12271122 [H]