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The map label for this gene is virB9 [H]

Identifier: 220916250

GI number: 220916250

Start: 1275050

End: 1275823

Strand: Direct

Name: virB9 [H]

Synonym: A2cp1_1143

Alternate gene names: 220916250

Gene position: 1275050-1275823 (Clockwise)

Preceding gene: 220916249

Following gene: 220916251

Centisome position: 25.35

GC content: 66.8

Gene sequence:

>774_bases
ATGCGCCGCGTGATCGTTCTCCTTCTCGCCATCGCCGTGTCCGCCGGAGCCTCCGAAGGCGGGCCGGACCGCCGGATTCG
GTACGTGAGCTACGACCCGGACACCGTCGTCCCCGTGGACGCGGTGGTCGGCATCGTCACGCACATCGTCCTCGAGCCCG
GCGAGAGCTACGTGACGCACGCGTTCGGCGACGGAAAGGCATGGGACTTCGCCGCAAAGGCAAACCACTTCTTCCTCAAG
GCGGTCGCGATGAACGCCGACTCGAACCTGACCATCGTCACCGACCGGCGGAGCTACCACTTCAGTCTCCGGCTCCTCGC
GGAACCGAAGGCGGCGCCGACCTTCGAGATCGCCTTCCGCTACCCCGATACCGAAGCGCGGAAACGCCGCGAGGTTGCGC
GGCGGGCCGCGGTCGATGACGGGTTCAAGGGCAACGGCGAGCTGCCGAATCTGGACTACACGATGAGCGGCGATCTCGAC
CTCTCGCCAGTGAACACGTGGGACGACCGCGAATTCACGTACTTCAAGTTTCCCGGCCAGCGCGACATCCCGTCCATCTA
CACGGTGGACCTGGACGGCAACGAGTCGATCGTGAACCGCCACAGCACGGGACCGTCGAACGAGATCGTGGTCGTCCACA
AGGTCGCCGCCCGCTGGGTGCTCCGGCTCGGCTCGCGCGCGCTCGCCATATGGAACGACGCGTACGACCCCGGGGGACGA
CGGAACGTGAGCCGGACGGCCTCGCCGGACGTGAACCGCGTGCTCTGGAGGTAG

Upstream 100 bases:

>100_bases
CATGCACGAGCAGGACCGGCTCGTGAACCCGCTCGGTTTCCAGGTGACGAGCTATCGGGTCGATCCCGAGATCGCGGGCG
GCGGGTGAGGGGAGGCGTTC

Downstream 100 bases:

>100_bases
CCATGGCGGAGACCATCGTCGATGCGGCGGTGGAGCTGGAGAAGCGCGAGCGGGAGCGGGCGCGCGCCGAGGAGGCGGCG
CCGGACGTCGAGGGGGCGCG

Product: P-type conjugative transfer protein VirB9

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MRRVIVLLLAIAVSAGASEGGPDRRIRYVSYDPDTVVPVDAVVGIVTHIVLEPGESYVTHAFGDGKAWDFAAKANHFFLK
AVAMNADSNLTIVTDRRSYHFSLRLLAEPKAAPTFEIAFRYPDTEARKRREVARRAAVDDGFKGNGELPNLDYTMSGDLD
LSPVNTWDDREFTYFKFPGQRDIPSIYTVDLDGNESIVNRHSTGPSNEIVVVHKVAARWVLRLGSRALAIWNDAYDPGGR
RNVSRTASPDVNRVLWR

Sequences:

>Translated_257_residues
MRRVIVLLLAIAVSAGASEGGPDRRIRYVSYDPDTVVPVDAVVGIVTHIVLEPGESYVTHAFGDGKAWDFAAKANHFFLK
AVAMNADSNLTIVTDRRSYHFSLRLLAEPKAAPTFEIAFRYPDTEARKRREVARRAAVDDGFKGNGELPNLDYTMSGDLD
LSPVNTWDDREFTYFKFPGQRDIPSIYTVDLDGNESIVNRHSTGPSNEIVVVHKVAARWVLRLGSRALAIWNDAYDPGGR
RNVSRTASPDVNRVLWR
>Mature_257_residues
MRRVIVLLLAIAVSAGASEGGPDRRIRYVSYDPDTVVPVDAVVGIVTHIVLEPGESYVTHAFGDGKAWDFAAKANHFFLK
AVAMNADSNLTIVTDRRSYHFSLRLLAEPKAAPTFEIAFRYPDTEARKRREVARRAAVDDGFKGNGELPNLDYTMSGDLD
LSPVNTWDDREFTYFKFPGQRDIPSIYTVDLDGNESIVNRHSTGPSNEIVVVHKVAARWVLRLGSRALAIWNDAYDPGGR
RNVSRTASPDVNRVLWR

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 28661; Mature: 28661

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVIVLLLAIAVSAGASEGGPDRRIRYVSYDPDTVVPVDAVVGIVTHIVLEPGESYVTH
CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHEEECCCCCEEEE
AFGDGKAWDFAAKANHFFLKAVAMNADSNLTIVTDRRSYHFSLRLLAEPKAAPTFEIAFR
ECCCCCEEEEECCCCEEEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEEEE
YPDTEARKRREVARRAAVDDGFKGNGELPNLDYTMSGDLDLSPVNTWDDREFTYFKFPGQ
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEECCCCCCCCCCEEEEEECCCC
RDIPSIYTVDLDGNESIVNRHSTGPSNEIVVVHKVAARWVLRLGSRALAIWNDAYDPGGR
CCCCEEEEEEECCCHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECCCCCCCCC
RNVSRTASPDVNRVLWR
CCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MRRVIVLLLAIAVSAGASEGGPDRRIRYVSYDPDTVVPVDAVVGIVTHIVLEPGESYVTH
CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHEEECCCCCEEEE
AFGDGKAWDFAAKANHFFLKAVAMNADSNLTIVTDRRSYHFSLRLLAEPKAAPTFEIAFR
ECCCCCEEEEECCCCEEEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCCEEEEEEE
YPDTEARKRREVARRAAVDDGFKGNGELPNLDYTMSGDLDLSPVNTWDDREFTYFKFPGQ
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEECCCCCCCCCCEEEEEECCCC
RDIPSIYTVDLDGNESIVNRHSTGPSNEIVVVHKVAARWVLRLGSRALAIWNDAYDPGGR
CCCCEEEEEEECCCHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECCCCCCCCC
RNVSRTASPDVNRVLWR
CCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]