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The map label for this gene is 220916134

Identifier: 220916134

GI number: 220916134

Start: 1144800

End: 1145690

Strand: Reverse

Name: 220916134

Synonym: A2cp1_1021

Alternate gene names: NA

Gene position: 1145690-1144800 (Counterclockwise)

Preceding gene: 220916137

Following gene: 220916133

Centisome position: 22.78

GC content: 74.3

Gene sequence:

>891_bases
ATGGCGAGGGCGATCTGGAGCGGCGCGCTGACCTTCGGCCTGGTGAACATCCCGGTGAAGCTCTACACCGCGGTGCACCA
GAAGGAGGTGCGGTTCCACATGCTGCACGACGCGGACGGCGCCCGCATCCAGCTGCGCCGCTTCTGCTCGACAGAGGAGA
AGGAGGTCCCCTACGAGCACATCGTGAAGGGGTACGAGGTGTCGCCCGGCCGCTACGTGACGGTGACGCGCGAGGAGCTG
GAGGCGTTCGACCCGAAGGCCACGCGCACGGTGGAGATCCACGACTTCGTGGAGCTCTCCGAGATCGACCCGGCGTTCTT
CGAGGCGAGCTACTACCTCGTGCCCGACCGCAGCGCGGCGAAGGCGTACCGGCTGCTCGGCGACGCCATGCGCAAGGCGG
GCAAGGTCGCGATCGCCACCGCGGTGCTGCGCACGCGCGAGTCGCTCTGCTGCGTGCGCCCGGCGGCCGGCGGCGCGCTG
GCGCTCTCCACCATGAACCGCGCCGACGAGATCGACTCGCCGGGCTCGCTGGAGCTGCCGGAGGCGGGCGAGCCGTCCTC
GCGCGAGCTGCAGATGGCGGAGCAGCTCGTCGCGTCGCTCTCCGGGCCGTTCGAGCCCGAGCGCTACCCGGACCTGCGTC
GCGAGCGCGTCCTCGAGCTCATCGAGCGCAAGGCCGAGGGCCAGACCATCGAGGCGCCCGCCGCCGAGCCGGCCGGCGCC
GAGGTGGTGAGCCTCGCCGACGCGCTCTCCGCCAGCCTCGCGGCGGCCCGCCGGCGGGGAGCCGAGCCCGAGGCGCCGGC
GCGAGGCGAGCGACGCCACGCGCCCGCGGCCGCGGCCCGGACCACCGGCCGGCCCCGCGCCGCGCGCGCGTCGCGCAAGA
AGCGCGGGTGA

Upstream 100 bases:

>100_bases
CGCAAGCTGGGGCTATCACCAGCCGAGGTGAACCCCGTCCTCGCCGGCGCGCGTTGCCGCCGCCGGCCGGGGGATGGAAC
GTTCGTCCGGAGGCATCCCG

Downstream 100 bases:

>100_bases
TCCGTGGCGCGCGCGCAGCAGGGCGTGGAGGTCGAGGTGGAGGGGCGGCGGATCCAGCTGCGCAACCTCGACAAGGTCTT
CTACCCCGAGGCCGGCTTCA

Product: Ku protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MARAIWSGALTFGLVNIPVKLYTAVHQKEVRFHMLHDADGARIQLRRFCSTEEKEVPYEHIVKGYEVSPGRYVTVTREEL
EAFDPKATRTVEIHDFVELSEIDPAFFEASYYLVPDRSAAKAYRLLGDAMRKAGKVAIATAVLRTRESLCCVRPAAGGAL
ALSTMNRADEIDSPGSLELPEAGEPSSRELQMAEQLVASLSGPFEPERYPDLRRERVLELIERKAEGQTIEAPAAEPAGA
EVVSLADALSASLAAARRRGAEPEAPARGERRHAPAAAARTTGRPRAARASRKKRG

Sequences:

>Translated_296_residues
MARAIWSGALTFGLVNIPVKLYTAVHQKEVRFHMLHDADGARIQLRRFCSTEEKEVPYEHIVKGYEVSPGRYVTVTREEL
EAFDPKATRTVEIHDFVELSEIDPAFFEASYYLVPDRSAAKAYRLLGDAMRKAGKVAIATAVLRTRESLCCVRPAAGGAL
ALSTMNRADEIDSPGSLELPEAGEPSSRELQMAEQLVASLSGPFEPERYPDLRRERVLELIERKAEGQTIEAPAAEPAGA
EVVSLADALSASLAAARRRGAEPEAPARGERRHAPAAAARTTGRPRAARASRKKRG
>Mature_295_residues
ARAIWSGALTFGLVNIPVKLYTAVHQKEVRFHMLHDADGARIQLRRFCSTEEKEVPYEHIVKGYEVSPGRYVTVTREELE
AFDPKATRTVEIHDFVELSEIDPAFFEASYYLVPDRSAAKAYRLLGDAMRKAGKVAIATAVLRTRESLCCVRPAAGGALA
LSTMNRADEIDSPGSLELPEAGEPSSRELQMAEQLVASLSGPFEPERYPDLRRERVLELIERKAEGQTIEAPAAEPAGAE
VVSLADALSASLAAARRRGAEPEAPARGERRHAPAAAARTTGRPRAARASRKKRG

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 32387; Mature: 32256

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAIWSGALTFGLVNIPVKLYTAVHQKEVRFHMLHDADGARIQLRRFCSTEEKEVPYEH
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCCCCCHHH
IVKGYEVSPGRYVTVTREELEAFDPKATRTVEIHDFVELSEIDPAFFEASYYLVPDRSAA
HHCCEEECCCCEEEEEHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHCCEEEEECCCHHH
KAYRLLGDAMRKAGKVAIATAVLRTRESLCCVRPAAGGALALSTMNRADEIDSPGSLELP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHCCCCCCCCCCC
EAGEPSSRELQMAEQLVASLSGPFEPERYPDLRRERVLELIERKAEGQTIEAPAAEPAGA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCH
EVVSLADALSASLAAARRRGAEPEAPARGERRHAPAAAARTTGRPRAARASRKKRG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
ARAIWSGALTFGLVNIPVKLYTAVHQKEVRFHMLHDADGARIQLRRFCSTEEKEVPYEH
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCCCCCHHH
IVKGYEVSPGRYVTVTREELEAFDPKATRTVEIHDFVELSEIDPAFFEASYYLVPDRSAA
HHCCEEECCCCEEEEEHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHCCEEEEECCCHHH
KAYRLLGDAMRKAGKVAIATAVLRTRESLCCVRPAAGGALALSTMNRADEIDSPGSLELP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCEEEHHHHHHHHCCCCCCCCCCC
EAGEPSSRELQMAEQLVASLSGPFEPERYPDLRRERVLELIERKAEGQTIEAPAAEPAGA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCH
EVVSLADALSASLAAARRRGAEPEAPARGERRHAPAAAARTTGRPRAARASRKKRG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA