Click here to switch to the map view.

The map label for this gene is 220916025

Identifier: 220916025

GI number: 220916025

Start: 1030437

End: 1031576

Strand: Reverse

Name: 220916025

Synonym: A2cp1_0911

Alternate gene names: NA

Gene position: 1031576-1030437 (Counterclockwise)

Preceding gene: 220916032

Following gene: 220916024

Centisome position: 20.51

GC content: 81.4

Gene sequence:

>1140_bases
ATGGCCGGGATCCCTCGACCCCTTCGGGACGGACGGCGCGGCACGCTGACGCATGCACTCGGAGTGACGCGCGTCGCCCG
CCTGACCGGCCTCGACCGGACCGGCGTGGAGGTGGCGAGCGCGGTGCGCCCGGACGGCCACGTGCTCCAGGTCACGAACG
GCAAGGGTGCGCGGTTCGAGGACGCCGCGCTGGGGGCGCTGGCCGAGGCGGCCGAGCTGTGGGCGGCGGAGCGCCCCGGC
CCGATGCCCCTGGCCTCTGCGGCGGAGCTCCGCGCCCGCCTGGGCGAGGGCGCGGTCATCGGGCCCGGCGCCCTGGCCGG
CGGCGGCGCGGATCCGGCCTGGGAGGCGCTGCGCGTCGCCTGGTGCCAGGGCGTGCCGCTCGAGGGCGGCGCGCCGATCG
CCGTGCCGGCGCAGGCCGTGTTCTGCCCGCCGCCCGGCGGCCCGCTCCTCGGCCCCGCGGTGCTGACCTGGACCTCGAAC
GGCATGGGCGCGCACCCGGACCCCGACCGCGCCGCCCTGCACGCGTTGCTCGAGGCGGTGGAGCGCGACCAGCTCGCGCG
GGCGCTCCCGGACGGCTTCACCGAGCGTGAGCTGGCCCGGCGCCTGCTCGATCCCGGCGGGCTGGCGGCGGCCGCGCCGC
GCACCGCCGCCCTGGCGGCGTCGCTGGAGGCGCGCGGGCTGCGCGTGCACCTGCTCGATCTCGTGCCCGCCGGGCGCCGC
GCCGGTGGCCTCGGGCTGCCCGTGGCCGGCGCGCTCCTCGGGGATCCGGGAGGGCCGGTGCCGCTCGCCGCCGGCTACGC
CTGCCGGCCCGGCCGCGACGAGGCGCTCCTCGCCGCGCTCCTCGAGGCCGCCCAGTCGCGCGCCACGGAGATCCACGGCG
CGCGCGAGGACGTGCTGCACGGCGACCGCGCGTCCGCCGCGCCGCTCGCCGCGCGCTGCGCCGCGCTGCGGCCGTCGCGC
AGGGCCGCCGCGCTGCCCTCGCTCGCCGCGCCGTCGCCCTCGGCCGCGCTCCGGCGGATCGCCGGCCGGCTGCGCGCGGC
CGGCCTGGGGCCCGCGGTGCGCGTCGCGCTCGAGGGCCCGCCCGGCCTGCACGTGGTGAAGATCGTCGCCCCCGGCCTCC
TGCGCTCGGAGCTCCTGTGA

Upstream 100 bases:

>100_bases
CAGGGCCAGGTCGACCGGCGTCTCGGGCATGGATGTCACCTCGGGCAGAAGGGTTCCCGCGCCGCGGGCGGGCGAGGGGC
GGCCCGGGATATAAGGGCGC

Downstream 100 bases:

>100_bases
AGCCCGCCTCCGGCCGCCTCCGCCCCGGCGACGTCGTCGCCTTCCTCGGCCCCTCGCTCGGCGCCGACGAGGCGCGCCGG
CTCGCGCCCTGCCGCGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MAGIPRPLRDGRRGTLTHALGVTRVARLTGLDRTGVEVASAVRPDGHVLQVTNGKGARFEDAALGALAEAAELWAAERPG
PMPLASAAELRARLGEGAVIGPGALAGGGADPAWEALRVAWCQGVPLEGGAPIAVPAQAVFCPPPGGPLLGPAVLTWTSN
GMGAHPDPDRAALHALLEAVERDQLARALPDGFTERELARRLLDPGGLAAAAPRTAALAASLEARGLRVHLLDLVPAGRR
AGGLGLPVAGALLGDPGGPVPLAAGYACRPGRDEALLAALLEAAQSRATEIHGAREDVLHGDRASAAPLAARCAALRPSR
RAAALPSLAAPSPSAALRRIAGRLRAAGLGPAVRVALEGPPGLHVVKIVAPGLLRSELL

Sequences:

>Translated_379_residues
MAGIPRPLRDGRRGTLTHALGVTRVARLTGLDRTGVEVASAVRPDGHVLQVTNGKGARFEDAALGALAEAAELWAAERPG
PMPLASAAELRARLGEGAVIGPGALAGGGADPAWEALRVAWCQGVPLEGGAPIAVPAQAVFCPPPGGPLLGPAVLTWTSN
GMGAHPDPDRAALHALLEAVERDQLARALPDGFTERELARRLLDPGGLAAAAPRTAALAASLEARGLRVHLLDLVPAGRR
AGGLGLPVAGALLGDPGGPVPLAAGYACRPGRDEALLAALLEAAQSRATEIHGAREDVLHGDRASAAPLAARCAALRPSR
RAAALPSLAAPSPSAALRRIAGRLRAAGLGPAVRVALEGPPGLHVVKIVAPGLLRSELL
>Mature_378_residues
AGIPRPLRDGRRGTLTHALGVTRVARLTGLDRTGVEVASAVRPDGHVLQVTNGKGARFEDAALGALAEAAELWAAERPGP
MPLASAAELRARLGEGAVIGPGALAGGGADPAWEALRVAWCQGVPLEGGAPIAVPAQAVFCPPPGGPLLGPAVLTWTSNG
MGAHPDPDRAALHALLEAVERDQLARALPDGFTERELARRLLDPGGLAAAAPRTAALAASLEARGLRVHLLDLVPAGRRA
GGLGLPVAGALLGDPGGPVPLAAGYACRPGRDEALLAALLEAAQSRATEIHGAREDVLHGDRASAAPLAARCAALRPSRR
AAALPSLAAPSPSAALRRIAGRLRAAGLGPAVRVALEGPPGLHVVKIVAPGLLRSELL

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017667
- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 38254; Mature: 38122

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGIPRPLRDGRRGTLTHALGVTRVARLTGLDRTGVEVASAVRPDGHVLQVTNGKGARFE
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEECCCCCCCH
DAALGALAEAAELWAAERPGPMPLASAAELRARLGEGAVIGPGALAGGGADPAWEALRVA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHH
WCQGVPLEGGAPIAVPAQAVFCPPPGGPLLGPAVLTWTSNGMGAHPDPDRAALHALLEAV
HHCCCCCCCCCCEEECCCEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
ERDQLARALPDGFTERELARRLLDPGGLAAAAPRTAALAASLEARGLRVHLLDLVPAGRR
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
AGGLGLPVAGALLGDPGGPVPLAAGYACRPGRDEALLAALLEAAQSRATEIHGAREDVLH
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHC
GDRASAAPLAARCAALRPSRRAAALPSLAAPSPSAALRRIAGRLRAAGLGPAVRVALEGP
CCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
PGLHVVKIVAPGLLRSELL
CCCEEEEECCCHHHHHHCC
>Mature Secondary Structure 
AGIPRPLRDGRRGTLTHALGVTRVARLTGLDRTGVEVASAVRPDGHVLQVTNGKGARFE
CCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEECCCCCCCH
DAALGALAEAAELWAAERPGPMPLASAAELRARLGEGAVIGPGALAGGGADPAWEALRVA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHH
WCQGVPLEGGAPIAVPAQAVFCPPPGGPLLGPAVLTWTSNGMGAHPDPDRAALHALLEAV
HHCCCCCCCCCCEEECCCEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
ERDQLARALPDGFTERELARRLLDPGGLAAAAPRTAALAASLEARGLRVHLLDLVPAGRR
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCC
AGGLGLPVAGALLGDPGGPVPLAAGYACRPGRDEALLAALLEAAQSRATEIHGAREDVLH
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHC
GDRASAAPLAARCAALRPSRRAAALPSLAAPSPSAALRRIAGRLRAAGLGPAVRVALEGP
CCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
PGLHVVKIVAPGLLRSELL
CCCEEEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]