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The map label for this gene is 220915895

Identifier: 220915895

GI number: 220915895

Start: 877597

End: 879216

Strand: Direct

Name: 220915895

Synonym: A2cp1_0779

Alternate gene names: NA

Gene position: 877597-879216 (Clockwise)

Preceding gene: 220915894

Following gene: 220915896

Centisome position: 17.45

GC content: 70.68

Gene sequence:

>1620_bases
ATGCCTAGTCGGAAGAGCGCGGGGACCGTCAAAGCGGGGAAGCGAGCTTCGCTGAAGAAGGCGCCGGTCGAGCGGAAGCC
GCCGGCGACGCCTGCGCACGACCTGCTCGCCGATCCTTTGCTCGGCGTTGCGCTGCAGGGAGGCGCGCGAGAGTGGCTCG
ACCTTCCCGGTGTGCTGGAGGCGCTCGGGAAGGATGAGATCGAGGGCTTCTCGGCGCTCCAGGCGCATCAGCAGCACGCC
TGGCACGCGTTCCTGGTCCAGCTCGCAGCGATCGCGCTCCATCGCGCAGAAGAGCGTTCGCCCAGGCTCAAGGCCGCCCG
GTGGCGAGAGCTGCTCGCGGCGCTCACCAAGGGGCGCCACGAGCCGTGGACGCTGGTCGTGCCAGATCTGCCCCGTCCCG
CCTTCCTGCAGCCGCCGGTGCTCGATGGGACGCTCGATGGCTTCAAGGCGCGGCTCGCTCGTTCCGACGAGCTCGACCTG
CTCGTCACCTCGAAGAACCATGATGTGAAGGCGGCGAGGGCTGCGAATGCTCGTCCGGAGCACTGGGTGTATGCGCTCGT
GTCGCTCCAGACGATGCAGGGGTTCTCCGGTAGGTCGAACTACGGAATCGCGCGGATGAACGGCGGGGCCGGCAGCAGGC
CGGGACTGGGCCTGGCGCCGGGCCACGCGCTCGGCGCGCGGTTCCGTCGCGACACCGCGGCTGCGCTCGAAGCCCGCGAT
GCGATCCGTGGGCCCCGTGGATACAAGGCGCGCGGCGGCATCGCGCTCCTGTGGCTCGAGCCCTGGGACGGGAAGTCGGC
GCTCACGCCCGGCGACCTGGATCCACTGTTCATCGAGATCTGCCGCCGCGTCCGGCTCGACCTCGTCGACGGGATGATCG
GCGCACACACCGTCGGGAGCGCAAATGCGCGGATCGACGCTGGCGATCTCAGGGGCAACACGGGCGATCCGTGGACGCCG
GTCCAGAAGGCGGAGAGCAAGCCCTACACGGCAACGGAGGCCGGGTTCTCGTACCGCGTGCTGCACCGGCTCCTAGGCGA
CGACTACCAGCCGGGAGTTGCGCAGGTCCCCCGCCGGGGCGACAGCGAGGTCGAGATTGTCGCGACCGTGCTGGCGCGAG
GCATGGGCAAGACGGCGGGCTTCCACGAGCGGCGGGTTCCGGTTCCCGGTGACCTCTTGCCCTGGCTCGCGGACGCTGGA
CGGCGCGCGCTCCTCGGCGCCTTTGCCGGCCAGCGCGTCCAGCTCGCGGCTGACGTGCAGCGGCACGTGCTGAAGCCTGC
CGTGCTGGCGTACCTGCAGGGCGCGCCCGACGAGCTCAACTTCAAGGATCGCCGCGCCGGCGCGTGGCTCGAGGCTCACG
ACGCCGAGGTCGATCGGATCTTCTTCGAGCGCCTCTGGGCGGACCTCTCGCGCGACGCGGAGCGCGCCCTCGCGGAGTGG
GCGAGGACGGTGCTGGACCTGGCCCGCGCCCAGCTCCAGTCCGCTTTCGAGGACGCGCCCGTTCCCATCGCGCGTCGCTA
CCGCGCCATCGCGGCCGCCGAGCGGGTCTTCGAGGGCGCGGCGCGGAAGCACGTGAAGCTCGCATTCGACCCGGAGAAGG
AGCAACGACATGAAGCCTGA

Upstream 100 bases:

>100_bases
TTCGTACGGTTCCAGTTCGGAGCACGACGCTTCGTCTACGACCGGCTCGGCCTTCGTCCTGAGGACGCCAGCGGACCACC
GCACGAGGAGGATGCTGCAG

Downstream 100 bases:

>100_bases
GGAGCACTCGACCCTTCAGCGCTCCGACGAGCGGTCGCTCTCGAGCCGCGTGAACGCGTTGGCCCGGGCGATCGCGTCCG
GCTCGCCCGGAGACGTGGCG

Product: CRISPR-associated protein, Cse1 family

Products: NA

Alternate protein names: CRISPR-Associated Cse1 Family Protein; CRISPR-Associated Protein

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MPSRKSAGTVKAGKRASLKKAPVERKPPATPAHDLLADPLLGVALQGGAREWLDLPGVLEALGKDEIEGFSALQAHQQHA
WHAFLVQLAAIALHRAEERSPRLKAARWRELLAALTKGRHEPWTLVVPDLPRPAFLQPPVLDGTLDGFKARLARSDELDL
LVTSKNHDVKAARAANARPEHWVYALVSLQTMQGFSGRSNYGIARMNGGAGSRPGLGLAPGHALGARFRRDTAAALEARD
AIRGPRGYKARGGIALLWLEPWDGKSALTPGDLDPLFIEICRRVRLDLVDGMIGAHTVGSANARIDAGDLRGNTGDPWTP
VQKAESKPYTATEAGFSYRVLHRLLGDDYQPGVAQVPRRGDSEVEIVATVLARGMGKTAGFHERRVPVPGDLLPWLADAG
RRALLGAFAGQRVQLAADVQRHVLKPAVLAYLQGAPDELNFKDRRAGAWLEAHDAEVDRIFFERLWADLSRDAERALAEW
ARTVLDLARAQLQSAFEDAPVPIARRYRAIAAAERVFEGAARKHVKLAFDPEKEQRHEA

Sequences:

>Translated_539_residues
MPSRKSAGTVKAGKRASLKKAPVERKPPATPAHDLLADPLLGVALQGGAREWLDLPGVLEALGKDEIEGFSALQAHQQHA
WHAFLVQLAAIALHRAEERSPRLKAARWRELLAALTKGRHEPWTLVVPDLPRPAFLQPPVLDGTLDGFKARLARSDELDL
LVTSKNHDVKAARAANARPEHWVYALVSLQTMQGFSGRSNYGIARMNGGAGSRPGLGLAPGHALGARFRRDTAAALEARD
AIRGPRGYKARGGIALLWLEPWDGKSALTPGDLDPLFIEICRRVRLDLVDGMIGAHTVGSANARIDAGDLRGNTGDPWTP
VQKAESKPYTATEAGFSYRVLHRLLGDDYQPGVAQVPRRGDSEVEIVATVLARGMGKTAGFHERRVPVPGDLLPWLADAG
RRALLGAFAGQRVQLAADVQRHVLKPAVLAYLQGAPDELNFKDRRAGAWLEAHDAEVDRIFFERLWADLSRDAERALAEW
ARTVLDLARAQLQSAFEDAPVPIARRYRAIAAAERVFEGAARKHVKLAFDPEKEQRHEA
>Mature_538_residues
PSRKSAGTVKAGKRASLKKAPVERKPPATPAHDLLADPLLGVALQGGAREWLDLPGVLEALGKDEIEGFSALQAHQQHAW
HAFLVQLAAIALHRAEERSPRLKAARWRELLAALTKGRHEPWTLVVPDLPRPAFLQPPVLDGTLDGFKARLARSDELDLL
VTSKNHDVKAARAANARPEHWVYALVSLQTMQGFSGRSNYGIARMNGGAGSRPGLGLAPGHALGARFRRDTAAALEARDA
IRGPRGYKARGGIALLWLEPWDGKSALTPGDLDPLFIEICRRVRLDLVDGMIGAHTVGSANARIDAGDLRGNTGDPWTPV
QKAESKPYTATEAGFSYRVLHRLLGDDYQPGVAQVPRRGDSEVEIVATVLARGMGKTAGFHERRVPVPGDLLPWLADAGR
RALLGAFAGQRVQLAADVQRHVLKPAVLAYLQGAPDELNFKDRRAGAWLEAHDAEVDRIFFERLWADLSRDAERALAEWA
RTVLDLARAQLQSAFEDAPVPIARRYRAIAAAERVFEGAARKHVKLAFDPEKEQRHEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58851; Mature: 58720

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRKSAGTVKAGKRASLKKAPVERKPPATPAHDLLADPLLGVALQGGAREWLDLPGVLE
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHH
ALGKDEIEGFSALQAHQQHAWHAFLVQLAAIALHRAEERSPRLKAARWRELLAALTKGRH
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
EPWTLVVPDLPRPAFLQPPVLDGTLDGFKARLARSDELDLLVTSKNHDVKAARAANARPE
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCH
HWVYALVSLQTMQGFSGRSNYGIARMNGGAGSRPGLGLAPGHALGARFRRDTAAALEARD
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AIRGPRGYKARGGIALLWLEPWDGKSALTPGDLDPLFIEICRRVRLDLVDGMIGAHTVGS
HHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
ANARIDAGDLRGNTGDPWTPVQKAESKPYTATEAGFSYRVLHRLLGDDYQPGVAQVPRRG
CCCEEEHHCCCCCCCCCCCCHHHCCCCCCCCHHCCHHHHHHHHHHCCCCCCCHHHCCCCC
DSEVEIVATVLARGMGKTAGFHERRVPVPGDLLPWLADAGRRALLGAFAGQRVQLAADVQ
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHH
RHVLKPAVLAYLQGAPDELNFKDRRAGAWLEAHDAEVDRIFFERLWADLSRDAERALAEW
HHHHHHHHHHHHCCCCCCCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARTVLDLARAQLQSAFEDAPVPIARRYRAIAAAERVFEGAARKHVKLAFDPEKEQRHEA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCC
>Mature Secondary Structure 
PSRKSAGTVKAGKRASLKKAPVERKPPATPAHDLLADPLLGVALQGGAREWLDLPGVLE
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHH
ALGKDEIEGFSALQAHQQHAWHAFLVQLAAIALHRAEERSPRLKAARWRELLAALTKGRH
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
EPWTLVVPDLPRPAFLQPPVLDGTLDGFKARLARSDELDLLVTSKNHDVKAARAANARPE
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCH
HWVYALVSLQTMQGFSGRSNYGIARMNGGAGSRPGLGLAPGHALGARFRRDTAAALEARD
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AIRGPRGYKARGGIALLWLEPWDGKSALTPGDLDPLFIEICRRVRLDLVDGMIGAHTVGS
HHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
ANARIDAGDLRGNTGDPWTPVQKAESKPYTATEAGFSYRVLHRLLGDDYQPGVAQVPRRG
CCCEEEHHCCCCCCCCCCCCHHHCCCCCCCCHHCCHHHHHHHHHHCCCCCCCHHHCCCCC
DSEVEIVATVLARGMGKTAGFHERRVPVPGDLLPWLADAGRRALLGAFAGQRVQLAADVQ
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHH
RHVLKPAVLAYLQGAPDELNFKDRRAGAWLEAHDAEVDRIFFERLWADLSRDAERALAEW
HHHHHHHHHHHHCCCCCCCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARTVLDLARAQLQSAFEDAPVPIARRYRAIAAAERVFEGAARKHVKLAFDPEKEQRHEA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA