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The map label for this gene is atoS [H]

Identifier: 220915651

GI number: 220915651

Start: 609294

End: 610538

Strand: Direct

Name: atoS [H]

Synonym: A2cp1_0532

Alternate gene names: 220915651

Gene position: 609294-610538 (Clockwise)

Preceding gene: 220915650

Following gene: 220915652

Centisome position: 12.11

GC content: 82.65

Gene sequence:

>1245_bases
ATGGGCCGCGCGCTCGCGCCGCTGCTCGCCGGCCTGCTCGGACTGGCCGGCGCGCTCGGCGCGACGCTCGCGCTCCACCG
CGCCGCCTCCGCGGCGCTGGATCGCGTGCTCGAGGAGCGGCTCGCCGGCGCGGGCGCCACCGCCGCCGAGCTGCTCGGGC
GGGCCGGCGCGGATCCGGCCGCGCTCCGCGCGGTGATGGCCGCGAACGGGCTGGAGGGGGCGTACCTCGTCGATCGCGAC
CTCCGCGTGCTGGCCGACGCCACCGGCGCGGCCGGCGGGCGCGCCGATCTGCTCCGGGCGGACCCGGCGCGGGTGGCGCG
CGCGCTGCGCGGCGAGCCCTCGGTGGCGTTCGCCTACGCGGTCGGGGACCTCCCGGTCGCGACCGGCTACTTCCCGGTGC
GCGGGCCGGACGGCGCGCCGGTGGCCGCGCTGGCGCTCGAGGCGGGGCAGGGCTTCGCGGCCGCGCGCGCCGGGCTGCGG
CGGGCGCTGTGGACGGGGGTGGCGCTCTCGGCGCTGGCCGCGCTGGCGCTGGCGCTCGGGGCGGCCGGCTTCGCGCGGGC
GGAGCGGCGCTCGGCGCGGGCCGCGGCGCGGGCCGCCCGCGGCGAGGCGCTCGCGACGATGGCCGCCATGGTCGCGCACG
AGATCCGCAACCCGCTCGGCGTCATCCGCGGCGCGGCCGAGCTGGTCCGCGCGCGCTCCGGGGCCGCGCTCGCGCCGCGC
GACCAGGAGGCGCTCGCCGACGTGCTCGGCGAGGTGGAGCGGCTGCGCCGCCTCACCGAGGACTTCCTGGACCTGGCGCG
CGACCCGGCCATCGCCGCCGAGCCGGCCGACCTCGCCGAGCTCGCCGCGGAGGCGGCGCGCGCGCTGGGCCGCGCCCACC
CGTCGGTCGAGGTGGCGCTCTCGGTGCCGCCGCTCCGGGTGCGCGCCGACGCGGCGCGGGTGCGCCAGGTGCTCGCGAAC
CTGCTCGAGAACGCGGCGCTGGCCGGGGCGCGCCGGGTCGCGGTCACCGCCGGCCCGGCCGGCCCGATGGCGCGGCTGGA
GGTGCGCGACGACGGGCCGGGCGTGGACGCGGCGGTGCGCGCACGCCTGTTCGAGCCGTTCGCGAGCGGCCGCGCCCGCG
GCGCCGGCCTGGGGCTCGCCATCTCCCGGCGCATCGCCGAGCGGCACGGCGGCGCGCTCGAGCTCGCCGACCCGGGCCCG
CCCGGCGCGGCGTTCGCGCTCACCCTGCCGCTCGAGCCCGGATAG

Upstream 100 bases:

>100_bases
GCCTGGGCCTGCAGGCCCGCCGCGCGCTCTCCAGCATCCCGTCGCTCGAGTACGACAAGCTCGTGCCCACCGTCGGCTTG
CAGTGGACGGCGGGGTATTG

Downstream 100 bases:

>100_bases
GATCGCCGCATGTCCCGCGTGCTGGTGGTGGACGACGAGCCCAAGCTCGGCCGCTTCGTGCAGGAGATGCTGGAGCTGGA
CGGGCACGAGGTGGTGCGCG

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MGRALAPLLAGLLGLAGALGATLALHRAASAALDRVLEERLAGAGATAAELLGRAGADPAALRAVMAANGLEGAYLVDRD
LRVLADATGAAGGRADLLRADPARVARALRGEPSVAFAYAVGDLPVATGYFPVRGPDGAPVAALALEAGQGFAAARAGLR
RALWTGVALSALAALALALGAAGFARAERRSARAAARAARGEALATMAAMVAHEIRNPLGVIRGAAELVRARSGAALAPR
DQEALADVLGEVERLRRLTEDFLDLARDPAIAAEPADLAELAAEAARALGRAHPSVEVALSVPPLRVRADAARVRQVLAN
LLENAALAGARRVAVTAGPAGPMARLEVRDDGPGVDAAVRARLFEPFASGRARGAGLGLAISRRIAERHGGALELADPGP
PGAAFALTLPLEPG

Sequences:

>Translated_414_residues
MGRALAPLLAGLLGLAGALGATLALHRAASAALDRVLEERLAGAGATAAELLGRAGADPAALRAVMAANGLEGAYLVDRD
LRVLADATGAAGGRADLLRADPARVARALRGEPSVAFAYAVGDLPVATGYFPVRGPDGAPVAALALEAGQGFAAARAGLR
RALWTGVALSALAALALALGAAGFARAERRSARAAARAARGEALATMAAMVAHEIRNPLGVIRGAAELVRARSGAALAPR
DQEALADVLGEVERLRRLTEDFLDLARDPAIAAEPADLAELAAEAARALGRAHPSVEVALSVPPLRVRADAARVRQVLAN
LLENAALAGARRVAVTAGPAGPMARLEVRDDGPGVDAAVRARLFEPFASGRARGAGLGLAISRRIAERHGGALELADPGP
PGAAFALTLPLEPG
>Mature_413_residues
GRALAPLLAGLLGLAGALGATLALHRAASAALDRVLEERLAGAGATAAELLGRAGADPAALRAVMAANGLEGAYLVDRDL
RVLADATGAAGGRADLLRADPARVARALRGEPSVAFAYAVGDLPVATGYFPVRGPDGAPVAALALEAGQGFAAARAGLRR
ALWTGVALSALAALALALGAAGFARAERRSARAAARAARGEALATMAAMVAHEIRNPLGVIRGAAELVRARSGAALAPRD
QEALADVLGEVERLRRLTEDFLDLARDPAIAAEPADLAELAAEAARALGRAHPSVEVALSVPPLRVRADAARVRQVLANL
LENAALAGARRVAVTAGPAGPMARLEVRDDGPGVDAAVRARLFEPFASGRARGAGLGLAISRRIAERHGGALELADPGPP
GAAFALTLPLEPG

Specific function: Member of the two-component regulatory system AtoS/AtoC; may activate AtoC by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=237, Percent_Identity=31.6455696202532, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1790436, Length=277, Percent_Identity=33.5740072202166, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1789808, Length=191, Percent_Identity=32.4607329842932, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1786912, Length=292, Percent_Identity=29.7945205479452, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87081816, Length=241, Percent_Identity=34.8547717842324, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1790300, Length=332, Percent_Identity=28.0120481927711, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI48994928, Length=251, Percent_Identity=27.8884462151394, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788713, Length=245, Percent_Identity=27.3469387755102, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87082128, Length=221, Percent_Identity=27.6018099547511, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788393, Length=222, Percent_Identity=31.981981981982, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI145693157, Length=245, Percent_Identity=26.530612244898, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1790346, Length=217, Percent_Identity=26.7281105990783, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41697; Mature: 41566

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRALAPLLAGLLGLAGALGATLALHRAASAALDRVLEERLAGAGATAAELLGRAGADPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH
ALRAVMAANGLEGAYLVDRDLRVLADATGAAGGRADLLRADPARVARALRGEPSVAFAYA
HHHHHHHHCCCCCCEEECCCHHHHHHCCCCCCCCHHHHCCCHHHHHHHHCCCCCEEEEEE
VGDLPVATGYFPVRGPDGAPVAALALEAGQGFAAARAGLRRALWTGVALSALAALALALG
ECCCCCCCCEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGFARAERRSARAAARAARGEALATMAAMVAHEIRNPLGVIRGAAELVRARSGAALAPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DQEALADVLGEVERLRRLTEDFLDLARDPAIAAEPADLAELAAEAARALGRAHPSVEVAL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
SVPPLRVRADAARVRQVLANLLENAALAGARRVAVTAGPAGPMARLEVRDDGPGVDAAVR
ECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCCCHHHHH
ARLFEPFASGRARGAGLGLAISRRIAERHGGALELADPGPPGAAFALTLPLEPG
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
GRALAPLLAGLLGLAGALGATLALHRAASAALDRVLEERLAGAGATAAELLGRAGADPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH
ALRAVMAANGLEGAYLVDRDLRVLADATGAAGGRADLLRADPARVARALRGEPSVAFAYA
HHHHHHHHCCCCCCEEECCCHHHHHHCCCCCCCCHHHHCCCHHHHHHHHCCCCCEEEEEE
VGDLPVATGYFPVRGPDGAPVAALALEAGQGFAAARAGLRRALWTGVALSALAALALALG
ECCCCCCCCEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGFARAERRSARAAARAARGEALATMAAMVAHEIRNPLGVIRGAAELVRARSGAALAPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DQEALADVLGEVERLRRLTEDFLDLARDPAIAAEPADLAELAAEAARALGRAHPSVEVAL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
SVPPLRVRADAARVRQVLANLLENAALAGARRVAVTAGPAGPMARLEVRDDGPGVDAAVR
ECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCCCHHHHH
ARLFEPFASGRARGAGLGLAISRRIAERHGGALELADPGPPGAAFALTLPLEPG
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8346225; 9097040; 9278503 [H]