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The map label for this gene is yjdC [C]

Identifier: 220915371

GI number: 220915371

Start: 270432

End: 271037

Strand: Direct

Name: yjdC [C]

Synonym: A2cp1_0250

Alternate gene names: 220915371

Gene position: 270432-271037 (Clockwise)

Preceding gene: 220915369

Following gene: 220915373

Centisome position: 5.38

GC content: 74.26

Gene sequence:

>606_bases
ATGTCCCCGCGCGAGAAGCTGGTCGAGACCGCCGCAGCGCTGTTCTACCGGCACGGCTGCCACGCCGTGGGGATCGACAC
GGTCCTCGCCGAGGCAGGCGTGGCCAAGATGACCCTGTACCGGCACTTCCGCTCGAAGGACGAGCTGGTGCTCGCAGCGC
TGCGCCGGATGGACGAGCGGTTCCGCAACGCGTTCATGGCCGCGGTGGAGCGGGCGTCGGACACGCCGGCGGGCCGGCTC
GACGCGCTGTTCGACGTGGTGCGCGAGTGGGTTCGCGGGAAGGACTTCTACGGCTGCCCGTTCATCAACGTCACGGCCGA
GTTCGCCGCGCACGACGACCCGGTCCACGTCGCGGCGGCCGAGCACAAGCGGCTCGCGCTCGAGTACATCGAGCGGCTCG
CCGCCGAGGCGGGCGCTGCCGACGCGCGCGGGCTGGCCCGGGCGCTGAAGGTGCTCCTGGAGGGCTGCACGGTGCTCGCG
CAGGTCACCGGTCAACCCGGGTTCGTGGACGACGCGCAGCAGGCCGCGCGGCTGGTGCTCCAGGAGGGGCTCCGAGGCGC
CGTGCCCGCGCGCGCGCCGCGCCGGCCGCGCCGCGCGCGGACGTGA

Upstream 100 bases:

>100_bases
TCTACCGCGTCCAGCCCGGATTCGTGCGCCTGGCCCGCCGAGGCGGGTGAAATGGCGCGACGAGTGGGTATACTGCGCGC
GCCCCGGCCCGGAGCGAGCC

Downstream 100 bases:

>100_bases
GCTCCTCCCCGCTCCTTCGGTCGTTCGTGTTCGGTCGTTCGGTCGTTTCCCGTCGTTTCCCGACCTCGTTCGTTTCCCGA
CCCAGAGTCATTGATCGCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Regulatory Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Tetr Family; Tetr Family Transcriptional Regulator; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulatory Protein; TetR-Family Protein Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Repressor

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSPREKLVETAAALFYRHGCHAVGIDTVLAEAGVAKMTLYRHFRSKDELVLAALRRMDERFRNAFMAAVERASDTPAGRL
DALFDVVREWVRGKDFYGCPFINVTAEFAAHDDPVHVAAAEHKRLALEYIERLAAEAGAADARGLARALKVLLEGCTVLA
QVTGQPGFVDDAQQAARLVLQEGLRGAVPARAPRRPRRART

Sequences:

>Translated_201_residues
MSPREKLVETAAALFYRHGCHAVGIDTVLAEAGVAKMTLYRHFRSKDELVLAALRRMDERFRNAFMAAVERASDTPAGRL
DALFDVVREWVRGKDFYGCPFINVTAEFAAHDDPVHVAAAEHKRLALEYIERLAAEAGAADARGLARALKVLLEGCTVLA
QVTGQPGFVDDAQQAARLVLQEGLRGAVPARAPRRPRRART
>Mature_200_residues
SPREKLVETAAALFYRHGCHAVGIDTVLAEAGVAKMTLYRHFRSKDELVLAALRRMDERFRNAFMAAVERASDTPAGRLD
ALFDVVREWVRGKDFYGCPFINVTAEFAAHDDPVHVAAAEHKRLALEYIERLAAEAGAADARGLARALKVLLEGCTVLAQ
VTGQPGFVDDAQQAARLVLQEGLRGAVPARAPRRPRRART

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22091; Mature: 21959

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPREKLVETAAALFYRHGCHAVGIDTVLAEAGVAKMTLYRHFRSKDELVLAALRRMDER
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FRNAFMAAVERASDTPAGRLDALFDVVREWVRGKDFYGCPFINVTAEFAAHDDPVHVAAA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEHHH
EHKRLALEYIERLAAEAGAADARGLARALKVLLEGCTVLAQVTGQPGFVDDAQQAARLVL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QEGLRGAVPARAPRRPRRART
HHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPREKLVETAAALFYRHGCHAVGIDTVLAEAGVAKMTLYRHFRSKDELVLAALRRMDER
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FRNAFMAAVERASDTPAGRLDALFDVVREWVRGKDFYGCPFINVTAEFAAHDDPVHVAAA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEHHH
EHKRLALEYIERLAAEAGAADARGLARALKVLLEGCTVLAQVTGQPGFVDDAQQAARLVL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QEGLRGAVPARAPRRPRRART
HHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA