| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220915003
Identifier: 220915003
GI number: 220915003
Start: 378947
End: 379906
Strand: Reverse
Name: 220915003
Synonym: Mnod_8165
Alternate gene names: NA
Gene position: 379906-378947 (Counterclockwise)
Preceding gene: 220915004
Following gene: 220915002
Centisome position: 82.94
GC content: 65.73
Gene sequence:
>960_bases ATGGACGCTCGGCAACACTGGCCGATGACTCATGGCGAACCGCAGGTCGGCGTCAGGGAAGCTTGGTTGCTCGGGCAGCC GGGCCTGCAAGACTTTCTGGACTACGTCGAGGATCATGCAGTCGGCGTCGCCGCCCTGTCCCGCTCGGCGTTGGTCGATG AATGGCGCGCGGCCAACGACTACTACCATCACCTGGAGCTCAACGAGGCGGGTGCGGCGGATGCCATCGAGGTCCGGGAC CTGGATCCCACTTGTGCCGAGCTGGCCGACGCGGTGCGGGCGGATCCCCGCTACCGGCGCGCCTTCGACAAGGTGCCGAC CCGTTTCGCAATGGTCGAACTCGACCGTCTGGTGGTGGCGCAATCCCATATCGATCTCGACCATGCGGACCGGCTCCAAG CCCGCGCCGGAGATCGTCTGAATGCGCAAGCCCTCTTCCGCTTCTGCCAGCCCCTCGGTGACTTCGAGGCGCCCGTTCAG ATCCGGCAGGCCGGCGCACGCCGGTACCTGTTCGTCTCGGCTTCCTCGGATCTGCGCTTCCACGAATGTCTGCTGCTCAA GCCACAGGACCTGGCCAACCACGCCGCCTTCGGCTCGGTGAGTGGGGCCGTCGGGCTCATCGTCGGCTTCGGATCGAACT TCCTCAGCGTCGTCCAATCCGAGTCGCGCCTGCTCCTCCACAACGGCCACCATCGCGCCTACGCGCTGCGCGCCATGGGC GTCCGGTTCGCGCCCTGCATCATCCAGACCGCGACCCGTGGCGAGGAACTCGGCCTGCTCGCATCGAGCAAGGTCATGGC GTCGCCGAGCTTCTACTTCCGGGCGGCGCGGCCACCACTCCTGAAGGACTTCTTCGAACCGCGGATCCGCAAAGTGCTGC AGGTCCGCAGAACCTCGCAGGTCATCGAGCTGAGCTTCGAGGTGAAGGACTATTCCGTCAGGTCTCTCGACGACGCATAG
Upstream 100 bases:
>100_bases CTAACGGCCAAGCGCACCGGCGGATCGCCGCCGGTGCGCACACGACAAGGGGTACGAACGACGGCCGCAGCTTTCCGCCT GTAGGCCTGGGGAGGATGGC
Downstream 100 bases:
>100_bases GCTGATCCATGAGCCAGGATGGATCCGACTCCGAACTCGCTGCCGGCCAGAAACAGCTTCCCATCCACCGCGAGTCGCTG TTCCGGGCGGAGGTCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MDARQHWPMTHGEPQVGVREAWLLGQPGLQDFLDYVEDHAVGVAALSRSALVDEWRAANDYYHHLELNEAGAADAIEVRD LDPTCAELADAVRADPRYRRAFDKVPTRFAMVELDRLVVAQSHIDLDHADRLQARAGDRLNAQALFRFCQPLGDFEAPVQ IRQAGARRYLFVSASSDLRFHECLLLKPQDLANHAAFGSVSGAVGLIVGFGSNFLSVVQSESRLLLHNGHHRAYALRAMG VRFAPCIIQTATRGEELGLLASSKVMASPSFYFRAARPPLLKDFFEPRIRKVLQVRRTSQVIELSFEVKDYSVRSLDDA
Sequences:
>Translated_319_residues MDARQHWPMTHGEPQVGVREAWLLGQPGLQDFLDYVEDHAVGVAALSRSALVDEWRAANDYYHHLELNEAGAADAIEVRD LDPTCAELADAVRADPRYRRAFDKVPTRFAMVELDRLVVAQSHIDLDHADRLQARAGDRLNAQALFRFCQPLGDFEAPVQ IRQAGARRYLFVSASSDLRFHECLLLKPQDLANHAAFGSVSGAVGLIVGFGSNFLSVVQSESRLLLHNGHHRAYALRAMG VRFAPCIIQTATRGEELGLLASSKVMASPSFYFRAARPPLLKDFFEPRIRKVLQVRRTSQVIELSFEVKDYSVRSLDDA >Mature_319_residues MDARQHWPMTHGEPQVGVREAWLLGQPGLQDFLDYVEDHAVGVAALSRSALVDEWRAANDYYHHLELNEAGAADAIEVRD LDPTCAELADAVRADPRYRRAFDKVPTRFAMVELDRLVVAQSHIDLDHADRLQARAGDRLNAQALFRFCQPLGDFEAPVQ IRQAGARRYLFVSASSDLRFHECLLLKPQDLANHAAFGSVSGAVGLIVGFGSNFLSVVQSESRLLLHNGHHRAYALRAMG VRFAPCIIQTATRGEELGLLASSKVMASPSFYFRAARPPLLKDFFEPRIRKVLQVRRTSQVIELSFEVKDYSVRSLDDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35663; Mature: 35663
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARQHWPMTHGEPQVGVREAWLLGQPGLQDFLDYVEDHAVGVAALSRSALVDEWRAAND CCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YYHHLELNEAGAADAIEVRDLDPTCAELADAVRADPRYRRAFDKVPTRFAMVELDRLVVA CEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHH QSHIDLDHADRLQARAGDRLNAQALFRFCQPLGDFEAPVQIRQAGARRYLFVSASSDLRF HHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCCE HECLLLKPQDLANHAAFGSVSGAVGLIVGFGSNFLSVVQSESRLLLHNGHHRAYALRAMG EHEEEECCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCEEEEECCCCCEEHHHHCC VRFAPCIIQTATRGEELGLLASSKVMASPSFYFRAARPPLLKDFFEPRIRKVLQVRRTSQ CHHHHHHHHHHCCCCHHCEEECCCHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH VIELSFEVKDYSVRSLDDA EEEEEEEECCCCCCCCCCC >Mature Secondary Structure MDARQHWPMTHGEPQVGVREAWLLGQPGLQDFLDYVEDHAVGVAALSRSALVDEWRAAND CCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YYHHLELNEAGAADAIEVRDLDPTCAELADAVRADPRYRRAFDKVPTRFAMVELDRLVVA CEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHH QSHIDLDHADRLQARAGDRLNAQALFRFCQPLGDFEAPVQIRQAGARRYLFVSASSDLRF HHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCCE HECLLLKPQDLANHAAFGSVSGAVGLIVGFGSNFLSVVQSESRLLLHNGHHRAYALRAMG EHEEEECCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCEEEEECCCCCEEHHHHCC VRFAPCIIQTATRGEELGLLASSKVMASPSFYFRAARPPLLKDFFEPRIRKVLQVRRTSQ CHHHHHHHHHHCCCCHHCEEECCCHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH VIELSFEVKDYSVRSLDDA EEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA