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The map label for this gene is ntaR [H]

Identifier: 220914897

GI number: 220914897

Start: 271385

End: 272059

Strand: Reverse

Name: ntaR [H]

Synonym: Mnod_8046

Alternate gene names: 220914897

Gene position: 272059-271385 (Counterclockwise)

Preceding gene: 220914905

Following gene: 220914894

Centisome position: 59.39

GC content: 68.3

Gene sequence:

>675_bases
ATGCTGAACAAGACCCCCTCGATTTCCCAGGCCGATGCGGCCTATTGCCGAATCGAGGAGATGATCGTCACACGTGAGCT
CGCTCCCGGGCAGATGATCTCGGAGAAGCGCCTGAGCGAGCAGCTCGGATGCGGCCGCACGCCGCTGCGGGAGGCGCTGC
AGCGGCTAAAGCTCGAAGGTTACGTCGAGATTCACGCAAGCCGCGGCATCCTGGTGGCGCCCATCGACGTCATGCGGCAG
CTCGATCTCCTCGAGGTGCGCCGCTCGCTCGAGGACCTGATGGTACGGCTCGGCGCCGAGCGTGCGAGCGCGCCCGAGCG
CGAGCACCTGCGGGCGCTGGCCCGCGACCTCCAGGACGCCGCTGCGGCCAATGACCGAACCGCCTTCCTACGACTGAACC
GCGCCGTTCATCACGCGCTCTCCCGCGTCTCGCACAACGAGATGCTGGCGAGCACCATCGCCGTGGTGCACGGCCAGTCG
CGGCGCTTCTGGTACTCGCAATTCGAGGGACAGGGCCTTTTTGAGCAGGCCGCGCGCTTCCACGGCGCGACCCTTGAGGC
GGTTGCGGGCGGCAATGCCGACGAGGCCTCCCGCCACGCGGCCGCCTTCCTCGACTTCCTGGAGACGCTGACGCGCAACG
CCATCGAGCGACGCGCGGCCTATGCGCGGTCGTGA

Upstream 100 bases:

>100_bases
TACCGGTACTGATGGCCCCGGCCGCTGTCAACCGCGTTGTGTTGGCATTCAAGTTTCGCTCGTCTACGAGATCCCAGACC
GAGCTGCGTCGAGGTCCCCG

Downstream 100 bases:

>100_bases
AGTCTGCACCTGCGGCACGGGACAAGCCTCAGCCGACGTGCTGGAGAAGCTCGCGGGCGATGACGAGGCGCTGGACCTCG
CTGGTGCCCTCGACGATCTG

Product: transcriptional regulator, GntR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLNKTPSISQADAAYCRIEEMIVTRELAPGQMISEKRLSEQLGCGRTPLREALQRLKLEGYVEIHASRGILVAPIDVMRQ
LDLLEVRRSLEDLMVRLGAERASAPEREHLRALARDLQDAAAANDRTAFLRLNRAVHHALSRVSHNEMLASTIAVVHGQS
RRFWYSQFEGQGLFEQAARFHGATLEAVAGGNADEASRHAAAFLDFLETLTRNAIERRAAYARS

Sequences:

>Translated_224_residues
MLNKTPSISQADAAYCRIEEMIVTRELAPGQMISEKRLSEQLGCGRTPLREALQRLKLEGYVEIHASRGILVAPIDVMRQ
LDLLEVRRSLEDLMVRLGAERASAPEREHLRALARDLQDAAAANDRTAFLRLNRAVHHALSRVSHNEMLASTIAVVHGQS
RRFWYSQFEGQGLFEQAARFHGATLEAVAGGNADEASRHAAAFLDFLETLTRNAIERRAAYARS
>Mature_224_residues
MLNKTPSISQADAAYCRIEEMIVTRELAPGQMISEKRLSEQLGCGRTPLREALQRLKLEGYVEIHASRGILVAPIDVMRQ
LDLLEVRRSLEDLMVRLGAERASAPEREHLRALARDLQDAAAANDRTAFLRLNRAVHHALSRVSHNEMLASTIAVVHGQS
RRFWYSQFEGQGLFEQAARFHGATLEAVAGGNADEASRHAAAFLDFLETLTRNAIERRAAYARS

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25014; Mature: 25014

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKTPSISQADAAYCRIEEMIVTRELAPGQMISEKRLSEQLGCGRTPLREALQRLKLEG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHH
YVEIHASRGILVAPIDVMRQLDLLEVRRSLEDLMVRLGAERASAPEREHLRALARDLQDA
HEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHH
AAANDRTAFLRLNRAVHHALSRVSHNEMLASTIAVVHGQSRRFWYSQFEGQGLFEQAARF
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH
HGATLEAVAGGNADEASRHAAAFLDFLETLTRNAIERRAAYARS
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNKTPSISQADAAYCRIEEMIVTRELAPGQMISEKRLSEQLGCGRTPLREALQRLKLEG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHH
YVEIHASRGILVAPIDVMRQLDLLEVRRSLEDLMVRLGAERASAPEREHLRALARDLQDA
HEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHH
AAANDRTAFLRLNRAVHHALSRVSHNEMLASTIAVVHGQSRRFWYSQFEGQGLFEQAARF
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH
HGATLEAVAGGNADEASRHAAAFLDFLETLTRNAIERRAAYARS
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA