Click here to switch to the map view.

The map label for this gene is 220914855

Identifier: 220914855

GI number: 220914855

Start: 223635

End: 223991

Strand: Reverse

Name: 220914855

Synonym: Mnod_8001

Alternate gene names: NA

Gene position: 223991-223635 (Counterclockwise)

Preceding gene: 220914860

Following gene: 220914853

Centisome position: 48.9

GC content: 59.38

Gene sequence:

>357_bases
GTGTATGCTCATCACCAACGTCTGGATTCAGAGGAAGTCCAGGGACTGCGCCGAGAAGGCGGACGGTTCCTAAAAGATCT
GCGAGAGGCGCGCGGCCTCTCACAGCGGCAGCTCGCGACGTTGGTGGGTGCCGAATACTATACGTTCATCTCTCAACTCG
AGACCGGCCGCGGCCGCATCCCCCCAGATCGGTATCGCGCTTGGGCTGAGGCGCTGGGCATTGAGGTCCGGCACTTTGTC
CAGACTTTGATGCGCTTCTACGATCCATTGACCTATGAAATCCTGTTCGGAGCGGAGACGGACGCGGAACACTTACAGGG
CGATGCCGACCGTCCTCAGAGAACGACAGGAGGCTAA

Upstream 100 bases:

>100_bases
CGGGGGAGCGATCTGGACATCGGCCTGAGCCAGGTCTATATGTATATCACTGTACAGGTCGAAACAGCGCGTTCAGAGTT
CGCAAGGAGGCGCCTTCACC

Downstream 100 bases:

>100_bases
GTCGCTGCAGCTCTATGGTGCCTGCCGCAGTGCCGGTGAGTTTGGAGGACGGCCGCGGTGGCGAAGCGAGCCAGACCCGA
GGATGCCGCCGCAAAGCAGC

Product: transcriptional regulator, XRE family

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Cro/CI Family; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MYAHHQRLDSEEVQGLRREGGRFLKDLREARGLSQRQLATLVGAEYYTFISQLETGRGRIPPDRYRAWAEALGIEVRHFV
QTLMRFYDPLTYEILFGAETDAEHLQGDADRPQRTTGG

Sequences:

>Translated_118_residues
MYAHHQRLDSEEVQGLRREGGRFLKDLREARGLSQRQLATLVGAEYYTFISQLETGRGRIPPDRYRAWAEALGIEVRHFV
QTLMRFYDPLTYEILFGAETDAEHLQGDADRPQRTTGG
>Mature_118_residues
MYAHHQRLDSEEVQGLRREGGRFLKDLREARGLSQRQLATLVGAEYYTFISQLETGRGRIPPDRYRAWAEALGIEVRHFV
QTLMRFYDPLTYEILFGAETDAEHLQGDADRPQRTTGG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13626; Mature: 13626

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAHHQRLDSEEVQGLRREGGRFLKDLREARGLSQRQLATLVGAEYYTFISQLETGRGRI
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PPDRYRAWAEALGIEVRHFVQTLMRFYDPLTYEILFGAETDAEHLQGDADRPQRTTGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MYAHHQRLDSEEVQGLRREGGRFLKDLREARGLSQRQLATLVGAEYYTFISQLETGRGRI
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PPDRYRAWAEALGIEVRHFVQTLMRFYDPLTYEILFGAETDAEHLQGDADRPQRTTGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA