| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is yjhB [C]
Identifier: 220914765
GI number: 220914765
Start: 115061
End: 116296
Strand: Reverse
Name: yjhB [C]
Synonym: Mnod_7884
Alternate gene names: 220914765
Gene position: 116296-115061 (Counterclockwise)
Preceding gene: 220914766
Following gene: 220914764
Centisome position: 25.39
GC content: 63.51
Gene sequence:
>1236_bases TTGATCACATCTTCTGCCCCCGGACGGAGCGTTTCGACATTTGTGCCCGACTCGCCTGCGGCGTGGCGGCGATTGCTGAT CGCCCTAGCAATAGCCGCAGTCGGCACCGTCGGCACATGGTCGGTCGTGGTCGTGCTGCCAATGGTGCAGGCCGAACTCG GCGTCACGCGCGGCGCCGCATCGCTGGCATACACCTTGGCGATGATCGGCTTCGCCCTCGGCGGCGTCGTCACAGGCCGC CTGACGGACCGCCTCGGCATCATTCCCGCGATGGGAATGGGCATTCTGTCTCTGCTGTTCGGTTATCTCGGCGCCGGTAT TTCGACGGCGCTGTGGCAATTCGCCGTGGCGCATTTCTTCATCGGACTGGGCGCATCGGCGACCTTCGCGCCGTTGATGG CAGAAGCGTCGCGCTGGTTCGTGCGCCGGCGCGGAATCGCGGTGGGGATCGCCGGCAGCGGCTACTATCTCTCCGGCGCC TTCTGGCCTCCGCTCATCGAGCGGGGCATAGCCCAATATGGCTGGCAGATGACGCACATCGCCCTCGGCATTCTCTGCGG GGCCGCGATGACGGTGCTCCTCCTCATCCTCCGGTTGAGCATTGGCAGGTCGCAGCAGCGCTCGCTCGGCACCGAGGGTC GCCCGAGCGTCGATATCGATCTCAGCCCCAACGCTCTGACAGCCGTTCTCTCGGTCGCGAGCTTTTTCTGCTGTACGGCC ATGGCGGTGCCACAGGTGCATATCGTCGCCCTTTGCGGCGATCTCGGTTACGGCGTCGCGCGCGGAGTGGAAATGCTGTC GCTGATGCTGGCCTTCGGCGCCGTCAGCCGGATCGGCTCGGGCTTAATAGCCGATCGACTCGGCGGGCTCGCGACATTGC TGATCGGCTCGGTGGCGCAAGCCTCGGCGCTCACAATGTATCTGTTCTTCGACGGCCTCACGCCTCTCTATGTGGTCTCC GCCTTGTTCGGCCTGTTCCATGGGGGAATCGTGTCGAGCTATGCCATCATCGTTCGCGAGACGATGCCTACGAGAGAAGC GGCAACGCGCGTCGGCACGGTGATTATGGTCTCTTTGTTCGGCATGTCGTTCGGCGGTTGGATCTCCGGCGTGATCTTCG ACATGACTGGGTCGTATAAGGTGGCCTTTCTGAATGGGCTGGGATGGAACGCGCTGAATGTCGCAACAGTGCTGCTATTG CTGTTGCGCTCGCGCCGTCGCGCCGCTTTTGCCTGA
Upstream 100 bases:
>100_bases GCCCAAGCAAGCCGTCCAACAGACGCGTAAGACAACGCACGTCGCTGAAGGCGGATGTGATGCGCGCTGAACTAGAAAGC CCTGCCAGCGGAGAACCCAG
Downstream 100 bases:
>100_bases TCCGACCCGCACGGTTATCCTCGAATTCCGATCCCCAAGCCCGAAACGTTGCCTAGCTCGGGCTCGCGACAAACAGCGCG GCTGGACATCATCCTCCGTG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Transporter Facilitator Family; Facilitator Superfamily Transporter; Oxalate/Formate Antiporter; Transporter Protein; Twin-Arginine Translocation Pathway Signal; Facilitator Superfamily; Transmembrane Transporter; Oxalate/Formate Antiporter Protein
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MITSSAPGRSVSTFVPDSPAAWRRLLIALAIAAVGTVGTWSVVVVLPMVQAELGVTRGAASLAYTLAMIGFALGGVVTGR LTDRLGIIPAMGMGILSLLFGYLGAGISTALWQFAVAHFFIGLGASATFAPLMAEASRWFVRRRGIAVGIAGSGYYLSGA FWPPLIERGIAQYGWQMTHIALGILCGAAMTVLLLILRLSIGRSQQRSLGTEGRPSVDIDLSPNALTAVLSVASFFCCTA MAVPQVHIVALCGDLGYGVARGVEMLSLMLAFGAVSRIGSGLIADRLGGLATLLIGSVAQASALTMYLFFDGLTPLYVVS ALFGLFHGGIVSSYAIIVRETMPTREAATRVGTVIMVSLFGMSFGGWISGVIFDMTGSYKVAFLNGLGWNALNVATVLLL LLRSRRRAAFA
Sequences:
>Translated_411_residues MITSSAPGRSVSTFVPDSPAAWRRLLIALAIAAVGTVGTWSVVVVLPMVQAELGVTRGAASLAYTLAMIGFALGGVVTGR LTDRLGIIPAMGMGILSLLFGYLGAGISTALWQFAVAHFFIGLGASATFAPLMAEASRWFVRRRGIAVGIAGSGYYLSGA FWPPLIERGIAQYGWQMTHIALGILCGAAMTVLLLILRLSIGRSQQRSLGTEGRPSVDIDLSPNALTAVLSVASFFCCTA MAVPQVHIVALCGDLGYGVARGVEMLSLMLAFGAVSRIGSGLIADRLGGLATLLIGSVAQASALTMYLFFDGLTPLYVVS ALFGLFHGGIVSSYAIIVRETMPTREAATRVGTVIMVSLFGMSFGGWISGVIFDMTGSYKVAFLNGLGWNALNVATVLLL LLRSRRRAAFA >Mature_411_residues MITSSAPGRSVSTFVPDSPAAWRRLLIALAIAAVGTVGTWSVVVVLPMVQAELGVTRGAASLAYTLAMIGFALGGVVTGR LTDRLGIIPAMGMGILSLLFGYLGAGISTALWQFAVAHFFIGLGASATFAPLMAEASRWFVRRRGIAVGIAGSGYYLSGA FWPPLIERGIAQYGWQMTHIALGILCGAAMTVLLLILRLSIGRSQQRSLGTEGRPSVDIDLSPNALTAVLSVASFFCCTA MAVPQVHIVALCGDLGYGVARGVEMLSLMLAFGAVSRIGSGLIADRLGGLATLLIGSVAQASALTMYLFFDGLTPLYVVS ALFGLFHGGIVSSYAIIVRETMPTREAATRVGTVIMVSLFGMSFGGWISGVIFDMTGSYKVAFLNGLGWNALNVATVLLL LLRSRRRAAFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42475555, Length=334, Percent_Identity=26.6467065868263, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43001; Mature: 43001
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSSAPGRSVSTFVPDSPAAWRRLLIALAIAAVGTVGTWSVVVVLPMVQAELGVTRGAA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH SLAYTLAMIGFALGGVVTGRLTDRLGIIPAMGMGILSLLFGYLGAGISTALWQFAVAHFF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IGLGASATFAPLMAEASRWFVRRRGIAVGIAGSGYYLSGAFWPPLIERGIAQYGWQMTHI HHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCHHHHHHHHHHHCHHHHHH ALGILCGAAMTVLLLILRLSIGRSQQRSLGTEGRPSVDIDLSPNALTAVLSVASFFCCTA HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH MAVPQVHIVALCGDLGYGVARGVEMLSLMLAFGAVSRIGSGLIADRLGGLATLLIGSVAQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ASALTMYLFFDGLTPLYVVSALFGLFHGGIVSSYAIIVRETMPTREAATRVGTVIMVSLF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GMSFGGWISGVIFDMTGSYKVAFLNGLGWNALNVATVLLLLLRSRRRAAFA HCCHHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MITSSAPGRSVSTFVPDSPAAWRRLLIALAIAAVGTVGTWSVVVVLPMVQAELGVTRGAA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH SLAYTLAMIGFALGGVVTGRLTDRLGIIPAMGMGILSLLFGYLGAGISTALWQFAVAHFF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IGLGASATFAPLMAEASRWFVRRRGIAVGIAGSGYYLSGAFWPPLIERGIAQYGWQMTHI HHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCHHHHHHHHHHHCHHHHHH ALGILCGAAMTVLLLILRLSIGRSQQRSLGTEGRPSVDIDLSPNALTAVLSVASFFCCTA HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH MAVPQVHIVALCGDLGYGVARGVEMLSLMLAFGAVSRIGSGLIADRLGGLATLLIGSVAQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ASALTMYLFFDGLTPLYVVSALFGLFHGGIVSSYAIIVRETMPTREAATRVGTVIMVSLF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GMSFGGWISGVIFDMTGSYKVAFLNGLGWNALNVATVLLLLLRSRRRAAFA HCCHHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA