| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
Click here to switch to the map view.
The map label for this gene is 220914764
Identifier: 220914764
GI number: 220914764
Start: 113365
End: 114066
Strand: Reverse
Name: 220914764
Synonym: Mnod_7882
Alternate gene names: NA
Gene position: 114066-113365 (Counterclockwise)
Preceding gene: 220914765
Following gene: 220914761
Centisome position: 24.9
GC content: 67.09
Gene sequence:
>702_bases ATGACCGTGCTCTCGTACTCCGGCTACCGCTTCCCGCGTGACATCATCCAACGCGCTGTGTGGTTGTATCTCCGGTTCAC CCTCCGCTTTCGCGACGTCGAAGAACTCCTGGCCGAGCGGGGGATCACAGTGACGTACGAGAGCATCCGACGCTGGGTTC TCACCTTCGGTCCGACGATCGCACGCGGGCTGCGAGCCCGCCGCCCCAAGCCGCACGCGCGATGGCACCTCGACGAGGTG TTCGTGCGCATCAGCGGCACGCAGATGGACCTGTGGCGGGCCGTGGACGCCGAAGGCGAGGTGCTGGACGTGCTGCTCCA GACCAAGCGGGACAGGCGCGCGGCTCAGAAGCTGATGCGCAAGCTTCTGAAGAAGCAGGGCATGGCACCGGAGACCTGGG TCACGGACAAGTGCCCGGCCTACGGAGCCGCGCTTCGTGAGATGAAGCTGAGCCGAGTGGATCACGTCCAGCGCAAGCGG GCGAACAACCGGGCGGAGAGCTCGCATGTGCCGGTGCGACGACGAGAGGCGAAGTTGCAGGGCTTCGAGTCGCCTGGCTC AGCCCAGCGGGTCTTGTCGATGCCCGCGGCCACCTACAACACCTTCACCGTTCCTCGTCACCTCGTCTCGGCTCGCACGC ACCGGCTCTTCCGAGCCGAGGCGTTCGCGATGTGGCGCGGTGCGGCGGGCGCGCCGGCCTGA
Upstream 100 bases:
>100_bases GACGATGAGGGTTGCCTGGAAGTGCCGGCCCTTGAAGGGGCTTGTCCCGTTGATTGGGCGCTGGCTTGCGGAGGGCTGGC GCGCAGCGTAGCCGGGTCGC
Downstream 100 bases:
>100_bases AAGGGGCCAACGTCGGTTTTCTCGCGGCTATTCCGACAACGTGACAAGCCCCCGAGAATGCGGCAGGTACGGAATAGCCG GCATTCTCGACGGCGCCGAC
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTVLSYSGYRFPRDIIQRAVWLYLRFTLRFRDVEELLAERGITVTYESIRRWVLTFGPTIARGLRARRPKPHARWHLDEV FVRISGTQMDLWRAVDAEGEVLDVLLQTKRDRRAAQKLMRKLLKKQGMAPETWVTDKCPAYGAALREMKLSRVDHVQRKR ANNRAESSHVPVRRREAKLQGFESPGSAQRVLSMPAATYNTFTVPRHLVSARTHRLFRAEAFAMWRGAAGAPA
Sequences:
>Translated_233_residues MTVLSYSGYRFPRDIIQRAVWLYLRFTLRFRDVEELLAERGITVTYESIRRWVLTFGPTIARGLRARRPKPHARWHLDEV FVRISGTQMDLWRAVDAEGEVLDVLLQTKRDRRAAQKLMRKLLKKQGMAPETWVTDKCPAYGAALREMKLSRVDHVQRKR ANNRAESSHVPVRRREAKLQGFESPGSAQRVLSMPAATYNTFTVPRHLVSARTHRLFRAEAFAMWRGAAGAPA >Mature_232_residues TVLSYSGYRFPRDIIQRAVWLYLRFTLRFRDVEELLAERGITVTYESIRRWVLTFGPTIARGLRARRPKPHARWHLDEVF VRISGTQMDLWRAVDAEGEVLDVLLQTKRDRRAAQKLMRKLLKKQGMAPETWVTDKCPAYGAALREMKLSRVDHVQRKRA NNRAESSHVPVRRREAKLQGFESPGSAQRVLSMPAATYNTFTVPRHLVSARTHRLFRAEAFAMWRGAAGAPA
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG3316
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 26956; Mature: 26824
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLSYSGYRFPRDIIQRAVWLYLRFTLRFRDVEELLAERGITVTYESIRRWVLTFGPTI CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCHHH ARGLRARRPKPHARWHLDEVFVRISGTQMDLWRAVDAEGEVLDVLLQTKRDRRAAQKLMR HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KLLKKQGMAPETWVTDKCPAYGAALREMKLSRVDHVQRKRANNRAESSHVPVRRREAKLQ HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC GFESPGSAQRVLSMPAATYNTFTVPRHLVSARTHRLFRAEAFAMWRGAAGAPA CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TVLSYSGYRFPRDIIQRAVWLYLRFTLRFRDVEELLAERGITVTYESIRRWVLTFGPTI EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCHHH ARGLRARRPKPHARWHLDEVFVRISGTQMDLWRAVDAEGEVLDVLLQTKRDRRAAQKLMR HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KLLKKQGMAPETWVTDKCPAYGAALREMKLSRVDHVQRKRANNRAESSHVPVRRREAKLQ HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC GFESPGSAQRVLSMPAATYNTFTVPRHLVSARTHRLFRAEAFAMWRGAAGAPA CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2548057; 2365064 [H]