| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914758
Identifier: 220914758
GI number: 220914758
Start: 106041
End: 107492
Strand: Reverse
Name: 220914758
Synonym: Mnod_7875
Alternate gene names: NA
Gene position: 107492-106041 (Counterclockwise)
Preceding gene: 220914759
Following gene: 220914757
Centisome position: 23.47
GC content: 63.84
Gene sequence:
>1452_bases ATGAAGCCGCCCATCCGAAACCATGCGGACTCGCGCCTTGCCGTTCCTGCGAAGAGGCTCTCTCTTATCGGCACCATCAC CTTGGCATTGGGTGGGTGCGTAACAGTCACGCCCGACGGCGGAATGCAACCCGTCGCGCAAGAGGTCGCCGCGGCGATTT CGAAGGAGACAGTCAAGATTGCTTCGCAGGCAGACGCCGCAGATGCGCAAGCTCGGGCCAAGGCGCTTCTGAACAAGCCG CTCACCGCCGGCACCGCAGTCCAGATCGCGCTCCTCAGCAATCGCGGGCTGCAAGCGGAGTATAATGCGCTCGGCCTATC GGAAGTCGATTTCGTCGAAGCGAGCCTGCCGCCCAATCCGACGGTGACGCTCGGCCGCGCGGTGGTCGATGGTACGCTTG ATGTCGAACGGCGCATCATCGCCAATCTCCTGGCGCTGCTGACGCAGCCGACGCGGCGGGCGATCGGCGAATTGCGGTTC GAGGCGGCGCGCTATCGCGCCATCGATGGGACGTTCCGCACGGCTGCCAATGCCCGCAAGGCCTATTATGCGGCCGTCGC GGCGCGGCAGAAGGTGAACTTTCTCGAACAGGCCCGTGCGAGCGCCGATGCGGCCGCCGATCTCACGCGCAGTCTCGGCG AAACGGGTGCAGCGAAGAAGCTCGATCAAGCCCGTACGGCCGCTTTCTATGCGGAGGTCTCCAATGAGCTTGCGGCGGCT CGGCTCGAAGCAGGAACGACGCGGGAAGCCTTGACACGCAGCCTCGGTGTGTGGGGCAGCGACATCAACTACAAACTCCC AAGCGAGTTGCCGCGCCTGCCGCAACGGCTGCTCTCCCAGCAGACGGCGGAAGCCGATGCAATCCGCAAGCGTGTCGATC TCATAGCCTCGCGGCTCGATCTTGATGCGCTTGCCACGTCGCTGCGTCTCGACCAAGCAACCCGCTACGCCTCGGCCTTC GAGCTCGCGGGCTTGTCACGGTTCGAACGCAGCAAGGTCGACGGTATCGTCGAGAAGACGAGCTCGGCGGGTCATTCGCT CGATCTCGCTATCGAGATCCCGATTTTCGATCTCGGCGAGACGACGCGGCGGCGCGCCGTTGAAACCTACATGCAGGCGG TCAACCGCTTTGCCGAACAGGCCGTGAATATCCGCTCGGAGGCGCGTGCGGCTTATCTGACCTATCGCGCCGCCTACGAC ATCGCGCTCGCCTATCGCAATAAGATCGTGCCACTGCGCCGGACGGTCAACGAACAGTCTCTGCTCGAATACAACGGCAT GCTCATCGACATCTTCGTGCTGCTGACGACCTTCCGCGAAGGCATCGACAGCAATATCGCGGCGATCGGCGCACAGCGCG ACTTCTTCATCGCCCGTGTCGATTTCGACGCGGCAATTCAGGGTGGCGGCTCAGGGCCCGGCGCGGCGATCCGCGTTGCC GCCGGCCAGTAA
Upstream 100 bases:
>100_bases ATACCCCCGTCACAGCGGGAACCGCCGACTATCGGCCGGTCGAGCCGAAATCTTGGATTCAACAAAATGAGCGGGTCGCT CCCCGAAACGGGAGCAAGCC
Downstream 100 bases:
>100_bases TCGGGAGAACATCATGTCAGTTTCACGTCGAAATTTTCTCAGTGCTGCTGGCGGTATAACGCTCGTCAGCGCCAGTGCGG TCTCTGGTCGAACGGCCTTC
Product: outer membrane efflux protein
Products: NA
Alternate protein names: Copper lerance Protein; Copper Resistance-Related Lipoprotein; Metal Ion Efflux Outer Membrane Protein; Outer Membrane Protein; Copper Resistance-Related Protein; Outer Membrane Efflux Protein Involved In Copper Resistance; TypeIsecretion System Outer Membrane Chanel Lipoprotein; Copper Resistance Protein; Efflux Protein; Outer Membrane Efflux Protein Involved
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MKPPIRNHADSRLAVPAKRLSLIGTITLALGGCVTVTPDGGMQPVAQEVAAAISKETVKIASQADAADAQARAKALLNKP LTAGTAVQIALLSNRGLQAEYNALGLSEVDFVEASLPPNPTVTLGRAVVDGTLDVERRIIANLLALLTQPTRRAIGELRF EAARYRAIDGTFRTAANARKAYYAAVAARQKVNFLEQARASADAAADLTRSLGETGAAKKLDQARTAAFYAEVSNELAAA RLEAGTTREALTRSLGVWGSDINYKLPSELPRLPQRLLSQQTAEADAIRKRVDLIASRLDLDALATSLRLDQATRYASAF ELAGLSRFERSKVDGIVEKTSSAGHSLDLAIEIPIFDLGETTRRRAVETYMQAVNRFAEQAVNIRSEARAAYLTYRAAYD IALAYRNKIVPLRRTVNEQSLLEYNGMLIDIFVLLTTFREGIDSNIAAIGAQRDFFIARVDFDAAIQGGGSGPGAAIRVA AGQ
Sequences:
>Translated_483_residues MKPPIRNHADSRLAVPAKRLSLIGTITLALGGCVTVTPDGGMQPVAQEVAAAISKETVKIASQADAADAQARAKALLNKP LTAGTAVQIALLSNRGLQAEYNALGLSEVDFVEASLPPNPTVTLGRAVVDGTLDVERRIIANLLALLTQPTRRAIGELRF EAARYRAIDGTFRTAANARKAYYAAVAARQKVNFLEQARASADAAADLTRSLGETGAAKKLDQARTAAFYAEVSNELAAA RLEAGTTREALTRSLGVWGSDINYKLPSELPRLPQRLLSQQTAEADAIRKRVDLIASRLDLDALATSLRLDQATRYASAF ELAGLSRFERSKVDGIVEKTSSAGHSLDLAIEIPIFDLGETTRRRAVETYMQAVNRFAEQAVNIRSEARAAYLTYRAAYD IALAYRNKIVPLRRTVNEQSLLEYNGMLIDIFVLLTTFREGIDSNIAAIGAQRDFFIARVDFDAAIQGGGSGPGAAIRVA AGQ >Mature_483_residues MKPPIRNHADSRLAVPAKRLSLIGTITLALGGCVTVTPDGGMQPVAQEVAAAISKETVKIASQADAADAQARAKALLNKP LTAGTAVQIALLSNRGLQAEYNALGLSEVDFVEASLPPNPTVTLGRAVVDGTLDVERRIIANLLALLTQPTRRAIGELRF EAARYRAIDGTFRTAANARKAYYAAVAARQKVNFLEQARASADAAADLTRSLGETGAAKKLDQARTAAFYAEVSNELAAA RLEAGTTREALTRSLGVWGSDINYKLPSELPRLPQRLLSQQTAEADAIRKRVDLIASRLDLDALATSLRLDQATRYASAF ELAGLSRFERSKVDGIVEKTSSAGHSLDLAIEIPIFDLGETTRRRAVETYMQAVNRFAEQAVNIRSEARAAYLTYRAAYD IALAYRNKIVPLRRTVNEQSLLEYNGMLIDIFVLLTTFREGIDSNIAAIGAQRDFFIARVDFDAAIQGGGSGPGAAIRVA AGQ
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51896; Mature: 51896
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPPIRNHADSRLAVPAKRLSLIGTITLALGGCVTVTPDGGMQPVAQEVAAAISKETVKI CCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHH ASQADAADAQARAKALLNKPLTAGTAVQIALLSNRGLQAEYNALGLSEVDFVEASLPPNP HHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHCCCCCCHHHHEECCCCCCC TVTLGRAVVDGTLDVERRIIANLLALLTQPTRRAIGELRFEAARYRAIDGTFRTAANARK CEEECHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AYYAAVAARQKVNFLEQARASADAAADLTRSLGETGAAKKLDQARTAAFYAEVSNELAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLEAGTTREALTRSLGVWGSDINYKLPSELPRLPQRLLSQQTAEADAIRKRVDLIASRLD HHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDALATSLRLDQATRYASAFELAGLSRFERSKVDGIVEKTSSAGHSLDLAIEIPIFDLGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEECCCH TTRRRAVETYMQAVNRFAEQAVNIRSEARAAYLTYRAAYDIALAYRNKIVPLRRTVNEQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH LLEYNGMLIDIFVLLTTFREGIDSNIAAIGAQRDFFIARVDFDAAIQGGGSGPGAAIRVA HHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECHHHHCCCCCCCCCCEEEEE AGQ CCC >Mature Secondary Structure MKPPIRNHADSRLAVPAKRLSLIGTITLALGGCVTVTPDGGMQPVAQEVAAAISKETVKI CCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHH ASQADAADAQARAKALLNKPLTAGTAVQIALLSNRGLQAEYNALGLSEVDFVEASLPPNP HHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHCCCCCCHHHHEECCCCCCC TVTLGRAVVDGTLDVERRIIANLLALLTQPTRRAIGELRFEAARYRAIDGTFRTAANARK CEEECHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AYYAAVAARQKVNFLEQARASADAAADLTRSLGETGAAKKLDQARTAAFYAEVSNELAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLEAGTTREALTRSLGVWGSDINYKLPSELPRLPQRLLSQQTAEADAIRKRVDLIASRLD HHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDALATSLRLDQATRYASAFELAGLSRFERSKVDGIVEKTSSAGHSLDLAIEIPIFDLGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEECCCH TTRRRAVETYMQAVNRFAEQAVNIRSEARAAYLTYRAAYDIALAYRNKIVPLRRTVNEQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH LLEYNGMLIDIFVLLTTFREGIDSNIAAIGAQRDFFIARVDFDAAIQGGGSGPGAAIRVA HHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECHHHHCCCCCCCCCCEEEEE AGQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA