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The map label for this gene is 220914742

Identifier: 220914742

GI number: 220914742

Start: 88618

End: 89952

Strand: Reverse

Name: 220914742

Synonym: Mnod_7856

Alternate gene names: NA

Gene position: 89952-88618 (Counterclockwise)

Preceding gene: 220914743

Following gene: 220914741

Centisome position: 19.64

GC content: 69.89

Gene sequence:

>1335_bases
ATGGCCAAGGTGTTTCGCTCCTGGGACGTCGATCAGGGCTGGCTGCTGCCACCCTCGCTGCATGAGTTCGTGCCGCCCGG
GCACATGGCGCACTTCGTGCGCGATACGGTGCGCGAGGCGCTCGACCTCTCAGCCATTCTCGACACCTACACCGAGGAGC
GCGGCTACCCGCCCTACCATCCCGGCATGATGGTGGCCCTGCTCCTCTACGGCTACAGCCGCGGTCTGTACTCGTCGCGT
CAGCTCGCCCGCGCCTGCGAGGAGCGGGTTGACTTCATGGCCGTGACCGGCCTGAACCGGCCCGACTTCCGCACCATCGC
TGACTTCCGCAAGCGGCATCTGACGGCGCTCTCGGACCTGTTCGTGCAGGTGCTGCGGCTGTGCCGGGCGGCCGGGCTGG
TCGGCTTTGCCCACGTGGCGGTGGACGGCACCAAGCTGAAGGCCAACGCCTCGCGCCACAAGGCGATGAGCTACGGCCGG
ATGAAGGCGGCCGAGTCGACGCTGGCCGCCGAGGTCGAGGCTTGGCTGGATCAAGCGCGCGAGGCCGACGCGGCGGAGGA
TCGGGCTCATGGGACCGACCATCGTGGCGACGAGACACCGGCCTGGATGGCCGACAAGCAGCGGCGGCTGGAGACGATCC
GCGCCGCCAAGGCCGCGTTGGAGGCAGAGGCTGCCGATCCGCCCGATCCGGAGGACGAGGACGGGCCGGGGGCCTCGTCG
GGCATGCGCTGGCAAGGTCGGCCCTTGCGGGGCGAGGACGGCGGTCCGCCCGACCGGGCGCAGCGCAACTTCACCGACCC
GGACAGCCGCATCCTGCCCACGCGCGACGGGTTCGTGCAGGGCTACAACGGCCAGATTGCGGTTGATGCGGCCCATCAGG
TGATCGTCGCGCATCGGCTCGTGACGAACCCCGCCGACTCGCGCGCTCTCGTGCCGCTCGTCGACGGCGTCTGCACCCAT
CTCGGGCGCAAGCCGCGGGAGGTCTCCGGAGATGCCGGCTTTGCCACCGAGGCGAACCTGGCCGCGCTGCAGGAGCGACG
GATCACAGCCTATCTCGCTCCGGGCCGTGCCCGTCACGGCGAGGCGGATGCAGCAGGTCGCCGGAGGCTGACGAAGATGC
CCCTGATGAGCGCGATGGCCGTCCGCCTGAAGCGGGCTGGGCGCCGGAGCCGTTACCGTCTCAGGAAGCAGGTCGTCGAG
CCGGTGTTCGGGCAGATCAAGCAGGCCAGAGGCTTCCGACAGTTCCTGCTACGTGGGCTCGATCAGGTCCGCGGCGAGTG
GGCGATGATCTGCACCGCCCATAACCTCCTGAAGCTGGCGCAGGCCGCGCGCTGA

Upstream 100 bases:

>100_bases
TCCTAGGACGCGGCGTATGCCGCTGGTCTTGGACGTCCATCTAGGAGCCCGTCCGAGTAAGTACCTCGACGGCGGCGCTT
TGGGATGATTCACTCGGCTC

Downstream 100 bases:

>100_bases
GCCTGTGGCGCAGGAGCCATCCGCCCAGATCTCAACCTTAGTCCCAACGCATCAAACCGTTACTCGGACGGGCTCCTAGA
TCGGCTCGGGCAGGGCGCCC

Product: transposase IS4 family protein

Products: NA

Alternate protein names: Transposase; IS4 Family Transposase; ISPsy6 Transposase; Transposase Is4 Family Protein; ISPpu20 Transposase; ISKpn6-Like Transposase; Transposase Is4 Family

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MAKVFRSWDVDQGWLLPPSLHEFVPPGHMAHFVRDTVREALDLSAILDTYTEERGYPPYHPGMMVALLLYGYSRGLYSSR
QLARACEERVDFMAVTGLNRPDFRTIADFRKRHLTALSDLFVQVLRLCRAAGLVGFAHVAVDGTKLKANASRHKAMSYGR
MKAAESTLAAEVEAWLDQAREADAAEDRAHGTDHRGDETPAWMADKQRRLETIRAAKAALEAEAADPPDPEDEDGPGASS
GMRWQGRPLRGEDGGPPDRAQRNFTDPDSRILPTRDGFVQGYNGQIAVDAAHQVIVAHRLVTNPADSRALVPLVDGVCTH
LGRKPREVSGDAGFATEANLAALQERRITAYLAPGRARHGEADAAGRRRLTKMPLMSAMAVRLKRAGRRSRYRLRKQVVE
PVFGQIKQARGFRQFLLRGLDQVRGEWAMICTAHNLLKLAQAAR

Sequences:

>Translated_444_residues
MAKVFRSWDVDQGWLLPPSLHEFVPPGHMAHFVRDTVREALDLSAILDTYTEERGYPPYHPGMMVALLLYGYSRGLYSSR
QLARACEERVDFMAVTGLNRPDFRTIADFRKRHLTALSDLFVQVLRLCRAAGLVGFAHVAVDGTKLKANASRHKAMSYGR
MKAAESTLAAEVEAWLDQAREADAAEDRAHGTDHRGDETPAWMADKQRRLETIRAAKAALEAEAADPPDPEDEDGPGASS
GMRWQGRPLRGEDGGPPDRAQRNFTDPDSRILPTRDGFVQGYNGQIAVDAAHQVIVAHRLVTNPADSRALVPLVDGVCTH
LGRKPREVSGDAGFATEANLAALQERRITAYLAPGRARHGEADAAGRRRLTKMPLMSAMAVRLKRAGRRSRYRLRKQVVE
PVFGQIKQARGFRQFLLRGLDQVRGEWAMICTAHNLLKLAQAAR
>Mature_443_residues
AKVFRSWDVDQGWLLPPSLHEFVPPGHMAHFVRDTVREALDLSAILDTYTEERGYPPYHPGMMVALLLYGYSRGLYSSRQ
LARACEERVDFMAVTGLNRPDFRTIADFRKRHLTALSDLFVQVLRLCRAAGLVGFAHVAVDGTKLKANASRHKAMSYGRM
KAAESTLAAEVEAWLDQAREADAAEDRAHGTDHRGDETPAWMADKQRRLETIRAAKAALEAEAADPPDPEDEDGPGASSG
MRWQGRPLRGEDGGPPDRAQRNFTDPDSRILPTRDGFVQGYNGQIAVDAAHQVIVAHRLVTNPADSRALVPLVDGVCTHL
GRKPREVSGDAGFATEANLAALQERRITAYLAPGRARHGEADAAGRRRLTKMPLMSAMAVRLKRAGRRSRYRLRKQVVEP
VFGQIKQARGFRQFLLRGLDQVRGEWAMICTAHNLLKLAQAAR

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49251; Mature: 49119

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS00732 RIBOSOMAL_S16

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVFRSWDVDQGWLLPPSLHEFVPPGHMAHFVRDTVREALDLSAILDTYTEERGYPPYH
CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PGMMVALLLYGYSRGLYSSRQLARACEERVDFMAVTGLNRPDFRTIADFRKRHLTALSDL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
FVQVLRLCRAAGLVGFAHVAVDGTKLKANASRHKAMSYGRMKAAESTLAAEVEAWLDQAR
HHHHHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EADAAEDRAHGTDHRGDETPAWMADKQRRLETIRAAKAALEAEAADPPDPEDEDGPGASS
HCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GMRWQGRPLRGEDGGPPDRAQRNFTDPDSRILPTRDGFVQGYNGQIAVDAAHQVIVAHRL
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH
VTNPADSRALVPLVDGVCTHLGRKPREVSGDAGFATEANLAALQERRITAYLAPGRARHG
HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCC
EADAAGRRRLTKMPLMSAMAVRLKRAGRRSRYRLRKQVVEPVFGQIKQARGFRQFLLRGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQVRGEWAMICTAHNLLKLAQAAR
HHHCCCEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKVFRSWDVDQGWLLPPSLHEFVPPGHMAHFVRDTVREALDLSAILDTYTEERGYPPYH
CCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PGMMVALLLYGYSRGLYSSRQLARACEERVDFMAVTGLNRPDFRTIADFRKRHLTALSDL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
FVQVLRLCRAAGLVGFAHVAVDGTKLKANASRHKAMSYGRMKAAESTLAAEVEAWLDQAR
HHHHHHHHHHHHHHHHHHHEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EADAAEDRAHGTDHRGDETPAWMADKQRRLETIRAAKAALEAEAADPPDPEDEDGPGASS
HCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GMRWQGRPLRGEDGGPPDRAQRNFTDPDSRILPTRDGFVQGYNGQIAVDAAHQVIVAHRL
CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH
VTNPADSRALVPLVDGVCTHLGRKPREVSGDAGFATEANLAALQERRITAYLAPGRARHG
HCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCC
EADAAGRRRLTKMPLMSAMAVRLKRAGRRSRYRLRKQVVEPVFGQIKQARGFRQFLLRGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQVRGEWAMICTAHNLLKLAQAAR
HHHCCCEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA