Click here to switch to the map view.

The map label for this gene is allC [C]

Identifier: 220914705

GI number: 220914705

Start: 45385

End: 46632

Strand: Reverse

Name: allC [C]

Synonym: Mnod_7813

Alternate gene names: 220914705

Gene position: 46632-45385 (Counterclockwise)

Preceding gene: 220914714

Following gene: 220914703

Centisome position: 10.18

GC content: 69.63

Gene sequence:

>1248_bases
ATGAGCCGCAGCAGCAACATCCGCCCGAACATCTCCCGCCTGTGGTCGTCGCTGATGCGATCGGCGGAGATCGGCGCAAC
GCCGAGAGGGGGCTTGCGGCGGCTCGCCCTGACCGAGGAGGACGGCGAGGTGCGCCGCGAGTTCATCCGCTGGTGCGAGG
AGGCAGGCTGCGTGGTCCGCGTCGATGGGATCGGCAACATCTTCGCGTTCCGGGCCGGGCAGGATCCGGACGCCAAGGCG
GTGCTCGTCGGCAGCCACCTCGACACCCAGATCAAGGGCGGCCGGTTCGACGGCATCCTCGGCGTGCTCGCCGGGCTGGA
GCTGGTGCGGACGCTCAACGACCACGGCGTGACGACCCGCCGCCCGATCGCGGTCGTCAACTGGACCAACGAGGAGGGCG
CCCGCTTCGAGCCGCCGATGATCGGGTCCGCCGTTTTCACCGGGCGGGCGTCTCTCGACTTTGCGCACGGGCGCGCCGAC
AAGGACGGCATCACCCTGGGGCAGGCCCTCGACGCGATCGGCTTCAGGGGAACGGACCGCCTCTCGCCCGAGGCCTTCGA
CAGCCTGTTCGAGCTGCACATCGAGCAGGGGCCGCATCTCGACGAGGCGAAGCGTCAGGTCGGGGTCGTGACGGGCGCCT
TCTCGGTCCGCGGCATGGTCGTCGAGGTGGTGGGCGAGACCGGGCATGTCGGCCCGACGCCGATGCCCAAGCGCCGCAAC
GCGATCGTCGGGGCCGCCCGAGTGACGCTCGCCGTCGACGACATCGGCTGGAGCCGGCACGAGACCGGCGGCAAGTCGAC
GACGATGCGGCTGCGGGTTGAGCCGAACCTGCTCGGCATCCTGCCGGACCGGGTCGAGATGACCTGCGACTTCCGCCATC
CCGACGACGCGGTCGCGACCGAGATGCTGGCTTCGCTCAAGGCGCAGATCCCGGATATCGAGCAGCGCTCGGGCTGCAAG
GTCTCGATCCGGGAGCAGTGGAGCTATGGCGGCATGCAATACGATCCGGGCTGCGTCGGACTCGTGCGCGAGGTGGCTCA
GGCGCTCGGATACAGCACGATGGACCTCCTGACCGAAGCGGGCCACGACGCCATGCACGCCGCCGACCACCTCCCGACCG
CGATGATCTTCACCCCCTGCGAGGGCGGACTGTCCCACAACGAGGCTGAGAACGTCACGCCGGACGACATCGAGCCCGGC
GTCAACGTCCTCCTGCAGAGTGTCCTGCGCCGAGCCGAGGTGGTGTGA

Upstream 100 bases:

>100_bases
GAGAGATGGCTATATCAAACATAGGTCGTTTGTATTTTACGGCTGGCGGGCGAGCCGCTATCGGCCGTGATCGACGCCCC
GCTCGAAACAAGGTCCGCCG

Downstream 100 bases:

>100_bases
GTTCGCCACCGGCCGGGCCGACCTTGGCGGATCCCGGCCGCAAGCCGCCCCCGATGGCAGCCGCCGCGCTCCTCATGCTG
AGGTGCGAGCGCAGCGAGCC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSRSSNIRPNISRLWSSLMRSAEIGATPRGGLRRLALTEEDGEVRREFIRWCEEAGCVVRVDGIGNIFAFRAGQDPDAKA
VLVGSHLDTQIKGGRFDGILGVLAGLELVRTLNDHGVTTRRPIAVVNWTNEEGARFEPPMIGSAVFTGRASLDFAHGRAD
KDGITLGQALDAIGFRGTDRLSPEAFDSLFELHIEQGPHLDEAKRQVGVVTGAFSVRGMVVEVVGETGHVGPTPMPKRRN
AIVGAARVTLAVDDIGWSRHETGGKSTTMRLRVEPNLLGILPDRVEMTCDFRHPDDAVATEMLASLKAQIPDIEQRSGCK
VSIREQWSYGGMQYDPGCVGLVREVAQALGYSTMDLLTEAGHDAMHAADHLPTAMIFTPCEGGLSHNEAENVTPDDIEPG
VNVLLQSVLRRAEVV

Sequences:

>Translated_415_residues
MSRSSNIRPNISRLWSSLMRSAEIGATPRGGLRRLALTEEDGEVRREFIRWCEEAGCVVRVDGIGNIFAFRAGQDPDAKA
VLVGSHLDTQIKGGRFDGILGVLAGLELVRTLNDHGVTTRRPIAVVNWTNEEGARFEPPMIGSAVFTGRASLDFAHGRAD
KDGITLGQALDAIGFRGTDRLSPEAFDSLFELHIEQGPHLDEAKRQVGVVTGAFSVRGMVVEVVGETGHVGPTPMPKRRN
AIVGAARVTLAVDDIGWSRHETGGKSTTMRLRVEPNLLGILPDRVEMTCDFRHPDDAVATEMLASLKAQIPDIEQRSGCK
VSIREQWSYGGMQYDPGCVGLVREVAQALGYSTMDLLTEAGHDAMHAADHLPTAMIFTPCEGGLSHNEAENVTPDDIEPG
VNVLLQSVLRRAEVV
>Mature_414_residues
SRSSNIRPNISRLWSSLMRSAEIGATPRGGLRRLALTEEDGEVRREFIRWCEEAGCVVRVDGIGNIFAFRAGQDPDAKAV
LVGSHLDTQIKGGRFDGILGVLAGLELVRTLNDHGVTTRRPIAVVNWTNEEGARFEPPMIGSAVFTGRASLDFAHGRADK
DGITLGQALDAIGFRGTDRLSPEAFDSLFELHIEQGPHLDEAKRQVGVVTGAFSVRGMVVEVVGETGHVGPTPMPKRRNA
IVGAARVTLAVDDIGWSRHETGGKSTTMRLRVEPNLLGILPDRVEMTCDFRHPDDAVATEMLASLKAQIPDIEQRSGCKV
SIREQWSYGGMQYDPGCVGLVREVAQALGYSTMDLLTEAGHDAMHAADHLPTAMIFTPCEGGLSHNEAENVTPDDIEPGV
NVLLQSVLRRAEVV

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=396, Percent_Identity=29.7979797979798, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 44972; Mature: 44840

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSSNIRPNISRLWSSLMRSAEIGATPRGGLRRLALTEEDGEVRREFIRWCEEAGCVVR
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEE
VDGIGNIFAFRAGQDPDAKAVLVGSHLDTQIKGGRFDGILGVLAGLELVRTLNDHGVTTR
ECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
RPIAVVNWTNEEGARFEPPMIGSAVFTGRASLDFAHGRADKDGITLGQALDAIGFRGTDR
CCEEEEEECCCCCCEECCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCC
LSPEAFDSLFELHIEQGPHLDEAKRQVGVVTGAFSVRGMVVEVVGETGHVGPTPMPKRRN
CCHHHHHHHHHHHHCCCCCHHHHHHHHEEEEECHHHCCEEEEEECCCCCCCCCCCCCCCC
AIVGAARVTLAVDDIGWSRHETGGKSTTMRLRVEPNLLGILPDRVEMTCDFRHPDDAVAT
CEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCEEEEECCCCCCHHHHH
EMLASLKAQIPDIEQRSGCKVSIREQWSYGGMQYDPGCVGLVREVAQALGYSTMDLLTEA
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHC
GHDAMHAADHLPTAMIFTPCEGGLSHNEAENVTPDDIEPGVNVLLQSVLRRAEVV
CCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRSSNIRPNISRLWSSLMRSAEIGATPRGGLRRLALTEEDGEVRREFIRWCEEAGCVVR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEE
VDGIGNIFAFRAGQDPDAKAVLVGSHLDTQIKGGRFDGILGVLAGLELVRTLNDHGVTTR
ECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
RPIAVVNWTNEEGARFEPPMIGSAVFTGRASLDFAHGRADKDGITLGQALDAIGFRGTDR
CCEEEEEECCCCCCEECCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCC
LSPEAFDSLFELHIEQGPHLDEAKRQVGVVTGAFSVRGMVVEVVGETGHVGPTPMPKRRN
CCHHHHHHHHHHHHCCCCCHHHHHHHHEEEEECHHHCCEEEEEECCCCCCCCCCCCCCCC
AIVGAARVTLAVDDIGWSRHETGGKSTTMRLRVEPNLLGILPDRVEMTCDFRHPDDAVAT
CEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCEEEEECCCCCCHHHHH
EMLASLKAQIPDIEQRSGCKVSIREQWSYGGMQYDPGCVGLVREVAQALGYSTMDLLTEA
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHC
GHDAMHAADHLPTAMIFTPCEGGLSHNEAENVTPDDIEPGVNVLLQSVLRRAEVV
CCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA