| Definition | Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence. |
|---|---|
| Accession | NC_011887 |
| Length | 458,070 |
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The map label for this gene is 220914703
Identifier: 220914703
GI number: 220914703
Start: 42753
End: 43781
Strand: Reverse
Name: 220914703
Synonym: Mnod_7811
Alternate gene names: NA
Gene position: 43781-42753 (Counterclockwise)
Preceding gene: 220914705
Following gene: 220914702
Centisome position: 9.56
GC content: 58.89
Gene sequence:
>1029_bases ATGAGGCGTCCAACGATCGCAGATCTGGCAGAGGCTGCGGGCGTCAGCGTGGCAACCGTAGATCGGGTTCTGAATGGTCG GTATCGCGTGCGGGAAGAGACTGCGCGTCGCGTCCTAGAGGCAGCGCATAAGATCGGCTTCTATGGTGCCAACGTCATTC GTGCGCGCGTCTTGGCGGAGCAGCCAGAATATCATTTGGGGTTCATTCTGCAGAAGGAGCGTCACGCGTTTTATCAGACA TTTGCCCGGCAGATTGAGGAGGCCGTAGGCGCCGTACCCAACAAGCGCCTGCGCGCCACGATCCGGTTCGTGCAGTCGGC GGCTCCGGCGGAACTGGCTGATCTGATTCGAAGTATGAAAGGCAAGGTGCAGGCCGTTGCTGCGACCGGCCTTGATCATC ATGATGCCACCGCAGCCGTGGCGGAATTGCGGGCCGTCGGCGTACCGACATTTTCTTTGCTGTCGGACTTCGCGCAGGGC GTTCGCGAAAGCTATATCGGTACTAATAACTTGCGCGTCGGCAGATCGGCTGCCTGGCTGATGTCGAAGATGGCGTGTCG CCCCGGCAAGATCGTCATTTTCATCGGCGGGCATCGGTATCATGGGCATGCGCTTCGAGAAACCGGTTTTCGAAGCTATT TCCGGGAATTCGCGCCCGATTTCGAATTATTGGACAGCATTGTCAACATCGAGACGCGCCAGCTGACTTGCGAAGCCACG CTCGGCCTTCTGGCGCGGCATGACGACGTGGTTGGAATCTACGTGGCCGGCGGCGGGATGGAAGGGGCGGTTGCAGCATT GCGTGAGGTCCGCCAGCCAGACGACGTCGCGTGCATCGTCAATGAATTGACTCCGGAGTCTACACAGGGGCTTTTGGACC GATTTGTTTCAATCGTCATGGCGACGCCGTTACCGACGCTGTGTTCGGATCTGGTAGCCATGATGGTTCATGCGATCGAA CACGGGATGGCGGAATATCCCGGCCAGCGATTCCTGCCGATTGAGCTCTGGACACCAGAGAGCCTCTGA
Upstream 100 bases:
>100_bases GTGAACTCCCGCAACAGATATTACTCATTTTTCCGCTTTTATGACGGATAGGAATGATCGATCATGATCATTCCAATGAT AGGATGGCGAGGTTCCCGAC
Downstream 100 bases:
>100_bases TTGGATTCCATCATGCCAAAAGATGCGAATCTATCAAATTTGACGTACAAGCTTCAGTTGCCGGCATTGACCCTCTTCGC GAGTTGAGAGATTTTCGCCA
Product: transcriptional regulator, LacI family
Products: NA
Alternate protein names: Transcriptional Regulator LacI Family; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; Transcriptional Regulator LacI Family Protein; LacI Regulatory Protein; LacI Family Regulatory Protein; Regulatory Protein LacI Family; HTH-Type Transcriptional Regulator MalR; Transcriptional Regulator Protein Laci-Family; Transcriptional Regulatory Protein; Regulatory Protein; Sugar ABC Transporter Periplasmic Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; Transcription Regulator Protein; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; HTH-Type Transcriptional Repressor PurR; Transcriptional Regulatory Protein LacI Family; Transcription Regulator
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRRPTIADLAEAAGVSVATVDRVLNGRYRVREETARRVLEAAHKIGFYGANVIRARVLAEQPEYHLGFILQKERHAFYQT FARQIEEAVGAVPNKRLRATIRFVQSAAPAELADLIRSMKGKVQAVAATGLDHHDATAAVAELRAVGVPTFSLLSDFAQG VRESYIGTNNLRVGRSAAWLMSKMACRPGKIVIFIGGHRYHGHALRETGFRSYFREFAPDFELLDSIVNIETRQLTCEAT LGLLARHDDVVGIYVAGGGMEGAVAALREVRQPDDVACIVNELTPESTQGLLDRFVSIVMATPLPTLCSDLVAMMVHAIE HGMAEYPGQRFLPIELWTPESL
Sequences:
>Translated_342_residues MRRPTIADLAEAAGVSVATVDRVLNGRYRVREETARRVLEAAHKIGFYGANVIRARVLAEQPEYHLGFILQKERHAFYQT FARQIEEAVGAVPNKRLRATIRFVQSAAPAELADLIRSMKGKVQAVAATGLDHHDATAAVAELRAVGVPTFSLLSDFAQG VRESYIGTNNLRVGRSAAWLMSKMACRPGKIVIFIGGHRYHGHALRETGFRSYFREFAPDFELLDSIVNIETRQLTCEAT LGLLARHDDVVGIYVAGGGMEGAVAALREVRQPDDVACIVNELTPESTQGLLDRFVSIVMATPLPTLCSDLVAMMVHAIE HGMAEYPGQRFLPIELWTPESL >Mature_342_residues MRRPTIADLAEAAGVSVATVDRVLNGRYRVREETARRVLEAAHKIGFYGANVIRARVLAEQPEYHLGFILQKERHAFYQT FARQIEEAVGAVPNKRLRATIRFVQSAAPAELADLIRSMKGKVQAVAATGLDHHDATAAVAELRAVGVPTFSLLSDFAQG VRESYIGTNNLRVGRSAAWLMSKMACRPGKIVIFIGGHRYHGHALRETGFRSYFREFAPDFELLDSIVNIETRQLTCEAT LGLLARHDDVVGIYVAGGGMEGAVAALREVRQPDDVACIVNELTPESTQGLLDRFVSIVMATPLPTLCSDLVAMMVHAIE HGMAEYPGQRFLPIELWTPESL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37620; Mature: 37620
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPTIADLAEAAGVSVATVDRVLNGRYRVREETARRVLEAAHKIGFYGANVIRARVLAE CCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPEYHLGFILQKERHAFYQTFARQIEEAVGAVPNKRLRATIRFVQSAAPAELADLIRSMK CCCCHHHHEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH GKVQAVAATGLDHHDATAAVAELRAVGVPTFSLLSDFAQGVRESYIGTNNLRVGRSAAWL CHHEEHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH MSKMACRPGKIVIFIGGHRYHGHALRETGFRSYFREFAPDFELLDSIVNIETRQLTCEAT HHHHCCCCCCEEEEECCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHEEHHHH LGLLARHDDVVGIYVAGGGMEGAVAALREVRQPDDVACIVNELTPESTQGLLDRFVSIVM HHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH ATPLPTLCSDLVAMMVHAIEHGMAEYPGQRFLPIELWTPESL HCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC >Mature Secondary Structure MRRPTIADLAEAAGVSVATVDRVLNGRYRVREETARRVLEAAHKIGFYGANVIRARVLAE CCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPEYHLGFILQKERHAFYQTFARQIEEAVGAVPNKRLRATIRFVQSAAPAELADLIRSMK CCCCHHHHEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH GKVQAVAATGLDHHDATAAVAELRAVGVPTFSLLSDFAQGVRESYIGTNNLRVGRSAAWL CHHEEHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH MSKMACRPGKIVIFIGGHRYHGHALRETGFRSYFREFAPDFELLDSIVNIETRQLTCEAT HHHHCCCCCCEEEEECCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHEEHHHH LGLLARHDDVVGIYVAGGGMEGAVAALREVRQPDDVACIVNELTPESTQGLLDRFVSIVM HHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH ATPLPTLCSDLVAMMVHAIEHGMAEYPGQRFLPIELWTPESL HCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA