The gene/protein map for NC_011887 is currently unavailable.
Definition Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence.
Accession NC_011887
Length 458,070

Click here to switch to the map view.

The map label for this gene is 220914698

Identifier: 220914698

GI number: 220914698

Start: 36821

End: 37606

Strand: Reverse

Name: 220914698

Synonym: Mnod_7806

Alternate gene names: NA

Gene position: 37606-36821 (Counterclockwise)

Preceding gene: 220914699

Following gene: 220914697

Centisome position: 8.21

GC content: 62.98

Gene sequence:

>786_bases
ATGCGTTTCGCACTGAATCATATTCTTGCGCCGAAGCTCCCGCTCGAGGAATTCTTCGCTTCTGCCCGCGCGCTCGGCGC
GACGGAGGTCGAGATCCGCAACGACCTGCCTGATGTCGTCGGTACCGTTGCGCCCGAAGAGGTAAGGACCGCCGCCGAAA
AGACAGGTGTGTCGATCATTTCGATCAAAGCGCTCTATCCGTTCAACGTCTGGACGGACGATATGGCGAAGCGCGCCGCC
AAGCTCGCTGCCTATGCGGCGGCCTGCGGCGCGAAGGCTCTGGTGATGTGCCCGCTCAATGAGGGCAAGGCCGTCGCGTT
CGACGTCCTCGTCGCCTCGCTCAAGGCGATGAAGCCCATCCTTCTGGACCACCGCCTGACCGGCCTTGTCGAGCCGCTCG
GCTTCCCGGTTTCCTCTCTTCGCACCAAGAAGGAGGCGATTGCAGCGATCAGGGCGGCCGATGGGGCGGACACCTACAGG
CTGGTGCACGACACGTTCCACCATCATCTCGCCGGCGAGACGGAATTCTTTCCCGAGTGGACGGGGCTCGTGCACATCTC
CGGCGTGACCGACCCCATCGTTGCGGTCGCCGACATGCTCGATGCGCATCGCGTCCTCGTCGACGGCGCCGACCGTCTGG
AGAACATCCCCCAGATCAGAAGGCTGATCGCGGCGGGCTATTCGGGTCCCTTCAGCTTCGAACCCTTCGCGACCGAGGTT
CATGAGCTTGAGGATCCCAAAGGCGCAGCGAAGCGGAGCATGGACTTCGTGTCCGCTTCTCTCTGA

Upstream 100 bases:

>100_bases
GATCACCTCGGATGCATGCGTCGAGGCGCAGGAGCGAGCAGGCGAGGCCGTCGCCATCACCCTGCCCGCCCGTCCTTCGC
TCTACAACTGAGGTGATGTC

Downstream 100 bases:

>100_bases
AAGCAGCGCTCCGGGACCAACAAAAAGAAGGCGTCGGCCCATGCCTGGGCCGGCAGCTGGTCTGACGAAATGGAACTGGC
CATGAAGCGACTTTTGCTTG

Product: Xylose isomerase domain protein TIM barrel

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; IolI Protein; Cytoplasmic Protein; Myo-Inositol Catabolism Protein; Sugar Epimerase; Sugar Epimerase Protein; Xylose Isomerase-Like TIM Barrel; Protein IolI; Protein Implicated IN Myo-Inositol Catabolique Pathway; Protein Implicated In Myo-Inositol Catabolique Pathway; IolL Protein; Myo-Inositol Catabolism Protein IolI

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRFALNHILAPKLPLEEFFASARALGATEVEIRNDLPDVVGTVAPEEVRTAAEKTGVSIISIKALYPFNVWTDDMAKRAA
KLAAYAAACGAKALVMCPLNEGKAVAFDVLVASLKAMKPILLDHRLTGLVEPLGFPVSSLRTKKEAIAAIRAADGADTYR
LVHDTFHHHLAGETEFFPEWTGLVHISGVTDPIVAVADMLDAHRVLVDGADRLENIPQIRRLIAAGYSGPFSFEPFATEV
HELEDPKGAAKRSMDFVSASL

Sequences:

>Translated_261_residues
MRFALNHILAPKLPLEEFFASARALGATEVEIRNDLPDVVGTVAPEEVRTAAEKTGVSIISIKALYPFNVWTDDMAKRAA
KLAAYAAACGAKALVMCPLNEGKAVAFDVLVASLKAMKPILLDHRLTGLVEPLGFPVSSLRTKKEAIAAIRAADGADTYR
LVHDTFHHHLAGETEFFPEWTGLVHISGVTDPIVAVADMLDAHRVLVDGADRLENIPQIRRLIAAGYSGPFSFEPFATEV
HELEDPKGAAKRSMDFVSASL
>Mature_261_residues
MRFALNHILAPKLPLEEFFASARALGATEVEIRNDLPDVVGTVAPEEVRTAAEKTGVSIISIKALYPFNVWTDDMAKRAA
KLAAYAAACGAKALVMCPLNEGKAVAFDVLVASLKAMKPILLDHRLTGLVEPLGFPVSSLRTKKEAIAAIRAADGADTYR
LVHDTFHHHLAGETEFFPEWTGLVHISGVTDPIVAVADMLDAHRVLVDGADRLENIPQIRRLIAAGYSGPFSFEPFATEV
HELEDPKGAAKRSMDFVSASL

Specific function: Unknown

COG id: COG4130

COG function: function code G; Predicted sugar epimerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28195; Mature: 28195

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFALNHILAPKLPLEEFFASARALGATEVEIRNDLPDVVGTVAPEEVRTAAEKTGVSII
CCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHCCCHHHHHHHHHHCCCEEE
SIKALYPFNVWTDDMAKRAAKLAAYAAACGAKALVMCPLNEGKAVAFDVLVASLKAMKPI
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
LLDHRLTGLVEPLGFPVSSLRTKKEAIAAIRAADGADTYRLVHDTFHHHLAGETEFFPEW
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
TGLVHISGVTDPIVAVADMLDAHRVLVDGADRLENIPQIRRLIAAGYSGPFSFEPFATEV
CCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
HELEDPKGAAKRSMDFVSASL
HHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFALNHILAPKLPLEEFFASARALGATEVEIRNDLPDVVGTVAPEEVRTAAEKTGVSII
CCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHCCCHHHHHHHHHHCCCEEE
SIKALYPFNVWTDDMAKRAAKLAAYAAACGAKALVMCPLNEGKAVAFDVLVASLKAMKPI
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
LLDHRLTGLVEPLGFPVSSLRTKKEAIAAIRAADGADTYRLVHDTFHHHLAGETEFFPEW
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
TGLVHISGVTDPIVAVADMLDAHRVLVDGADRLENIPQIRRLIAAGYSGPFSFEPFATEV
CCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
HELEDPKGAAKRSMDFVSASL
HHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA