| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905603
Identifier: 220905603
GI number: 220905603
Start: 2823378
End: 2825264
Strand: Direct
Name: 220905603
Synonym: Ddes_2343
Alternate gene names: NA
Gene position: 2823378-2825264 (Clockwise)
Preceding gene: 220905601
Following gene: 220905604
Centisome position: 98.26
GC content: 57.92
Gene sequence:
>1887_bases ATGTCCGCCAAAGCCAAACGCGCCGCCCTTATCGGCTATGACTGCCTTATTCCCAAAAGGCTTGAACATATGCTGGCCCA GGGAGGGCTGGAAAATTTCCGCAAGTTCATGAACGAAGGCAGCTACATTCCCGAAGGGTTCAACCTGCCCACGGTCACCC CGCCCTCGTGGGCTACCATCTGCACCGGCGCATGGCCCCGCACCCACGGCGTGGAAGACTATTATTACTATCATGAAGGC CGCAGCCTGGACTATAAAGAAACCACCCAGGCTTTCGGCTCCGACATCCTGACCGCCCAGACCATCTGGGACGCCTGGGA CAAGGCGGGCAAAAAATGTCTTGTGATCAACTATCCCATGTCCTGGCCGTCCAAGATGGACAAAGGCGTCATGATCATGG GCGAGGGCCTCAGCCCCGCAGAAACGCGCTGGCCCCTGCACGGTAACGAACACAAGGAATTTCTCTGTTCTGAAAGCGTG ATCTCCACCGACTACTATCCCATGGGCGCTCAGGGCGTTTTTGACGACGCCAAAGGCTGGAAAAACCTGCCCGAAGGCGA TGAGCCGCTGGAAATGACCGTGAACATGACTTTCAAGGAATCCATCGAACCCATTGAAGATCAGGTATGGCACTGCCTTG TCTGGCAGAGCGAGGACGACGGCTATGACCGCATGGCGCTGTGCCCTGAAAAAGACTATGCCAAGGCCTTTTTCACCATC ACCCTGGGCGCGTGGAGCGAGCCCGTGCAGCACGACTTTACCGTAAAGGCCGATGGCCGCACGGAAAAGGGCGTGTTCCG CTGCAAGCTCATGCAGCTGTCTGACGACGCTGAAGAATTCAAACTCTACGTATCCGGCATAGCGGGCCGCTGCGGTTTTG TGTCGCCTGCCGAAGCCGCTGCCCACATCGATTTTTCCAAAGACATCACAGCCAACGACATCGGCCTTGTGGCCTACCTG CACGGCATCATTGATACCGACACCGTGTGCGAACTCGTGGAATTTCACAGCGCGTGGCTCTGGAACACCATCAGCTCGCT TATCAAGGCCAATCCGGACTGGGATCTGCTCTACATGCACTCCCACCCCATTGACTGGTTCTACCACGGCTGGCTCAGCG ATCTGGACAGCAAGGACGAAGCCGTCCGCACCCGTGCCGAAAAGATGGAACGCCACATCTACGAAGTGGAAGACCGCCTG CTGGGCCGCCTGATGGACATTATGGGCGATGAGACCCTCATGTGCGTCTGCTCCGACCACGGTGCAACCCCCATGGGACC CATCCTCAATACGGCCCACGCGCTCAAAGAGGCCGGACTGTGCTCCTACGAGCCAAAAAAATCGGAAAATTACTGGGACA TCTACGAAGAAACCGAAGGCTTCAACTACGTGCTTGACGTGAACAAGTCCGTGGCCGTGCCCCAGCGCTACATGTTTGTC TACGTCAACCTGAAGGACAAATACCCCGGCGGCATTGTGGAAGCCGAGGATTATGAAAAGGTGCGCGACCAGATCATCGA TGCCCTGCTTGACTACAAACACCCCGAAACCGGCGAACGTCCGGTGCTGCTGGCCGTGCGCCGCGAAGACGCCCATGTGT TCGGTATGGGGGGTGCACAGGCGGGCGACGTGGTGTACGTGCTCAAGCCCGAATACATGGCCGAGCACGGCTATGGCCTG CCCACGGGCGAATCCGGCTGCGGCAGCCTGAAGAACCTGCTCATGTTCCGCGGGCCGAACATCAAAAAAGGCTACCGCTA CACGCGCCCGCGCTGGCTGGCCGATATCGTACCCACCTTCTGCTACGTGACAGGCAACCCCATTCCTGAAGACGCAGAAG GCGCGCCCATTTACCAGATCATGGAAAACCCCGACCTGGTGGACTAG
Upstream 100 bases:
>100_bases AAAATGAGGCGTTATCAACGTTGGCATACTTATTGATTAAACTGGCGGCATCACACGGCAATCTTATGCTCGTCATGCAT TATCAAGGAGGTTTATAGTT
Downstream 100 bases:
>100_bases CCAGCCCGCATTTGCAACCGGCGGGGCACGCCCCGCATCAGCCGCGCCCGCCCTCATGGGCGGGCGCGAAATAAAGGAAA GTATTATGGCAGAAAAAAAA
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Phosphodiesterase/Nucleotide Pyrophosphatase
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MSAKAKRAALIGYDCLIPKRLEHMLAQGGLENFRKFMNEGSYIPEGFNLPTVTPPSWATICTGAWPRTHGVEDYYYYHEG RSLDYKETTQAFGSDILTAQTIWDAWDKAGKKCLVINYPMSWPSKMDKGVMIMGEGLSPAETRWPLHGNEHKEFLCSESV ISTDYYPMGAQGVFDDAKGWKNLPEGDEPLEMTVNMTFKESIEPIEDQVWHCLVWQSEDDGYDRMALCPEKDYAKAFFTI TLGAWSEPVQHDFTVKADGRTEKGVFRCKLMQLSDDAEEFKLYVSGIAGRCGFVSPAEAAAHIDFSKDITANDIGLVAYL HGIIDTDTVCELVEFHSAWLWNTISSLIKANPDWDLLYMHSHPIDWFYHGWLSDLDSKDEAVRTRAEKMERHIYEVEDRL LGRLMDIMGDETLMCVCSDHGATPMGPILNTAHALKEAGLCSYEPKKSENYWDIYEETEGFNYVLDVNKSVAVPQRYMFV YVNLKDKYPGGIVEAEDYEKVRDQIIDALLDYKHPETGERPVLLAVRREDAHVFGMGGAQAGDVVYVLKPEYMAEHGYGL PTGESGCGSLKNLLMFRGPNIKKGYRYTRPRWLADIVPTFCYVTGNPIPEDAEGAPIYQIMENPDLVD
Sequences:
>Translated_628_residues MSAKAKRAALIGYDCLIPKRLEHMLAQGGLENFRKFMNEGSYIPEGFNLPTVTPPSWATICTGAWPRTHGVEDYYYYHEG RSLDYKETTQAFGSDILTAQTIWDAWDKAGKKCLVINYPMSWPSKMDKGVMIMGEGLSPAETRWPLHGNEHKEFLCSESV ISTDYYPMGAQGVFDDAKGWKNLPEGDEPLEMTVNMTFKESIEPIEDQVWHCLVWQSEDDGYDRMALCPEKDYAKAFFTI TLGAWSEPVQHDFTVKADGRTEKGVFRCKLMQLSDDAEEFKLYVSGIAGRCGFVSPAEAAAHIDFSKDITANDIGLVAYL HGIIDTDTVCELVEFHSAWLWNTISSLIKANPDWDLLYMHSHPIDWFYHGWLSDLDSKDEAVRTRAEKMERHIYEVEDRL LGRLMDIMGDETLMCVCSDHGATPMGPILNTAHALKEAGLCSYEPKKSENYWDIYEETEGFNYVLDVNKSVAVPQRYMFV YVNLKDKYPGGIVEAEDYEKVRDQIIDALLDYKHPETGERPVLLAVRREDAHVFGMGGAQAGDVVYVLKPEYMAEHGYGL PTGESGCGSLKNLLMFRGPNIKKGYRYTRPRWLADIVPTFCYVTGNPIPEDAEGAPIYQIMENPDLVD >Mature_627_residues SAKAKRAALIGYDCLIPKRLEHMLAQGGLENFRKFMNEGSYIPEGFNLPTVTPPSWATICTGAWPRTHGVEDYYYYHEGR SLDYKETTQAFGSDILTAQTIWDAWDKAGKKCLVINYPMSWPSKMDKGVMIMGEGLSPAETRWPLHGNEHKEFLCSESVI STDYYPMGAQGVFDDAKGWKNLPEGDEPLEMTVNMTFKESIEPIEDQVWHCLVWQSEDDGYDRMALCPEKDYAKAFFTIT LGAWSEPVQHDFTVKADGRTEKGVFRCKLMQLSDDAEEFKLYVSGIAGRCGFVSPAEAAAHIDFSKDITANDIGLVAYLH GIIDTDTVCELVEFHSAWLWNTISSLIKANPDWDLLYMHSHPIDWFYHGWLSDLDSKDEAVRTRAEKMERHIYEVEDRLL GRLMDIMGDETLMCVCSDHGATPMGPILNTAHALKEAGLCSYEPKKSENYWDIYEETEGFNYVLDVNKSVAVPQRYMFVY VNLKDKYPGGIVEAEDYEKVRDQIIDALLDYKHPETGERPVLLAVRREDAHVFGMGGAQAGDVVYVLKPEYMAEHGYGLP TGESGCGSLKNLLMFRGPNIKKGYRYTRPRWLADIVPTFCYVTGNPIPEDAEGAPIYQIMENPDLVD
Specific function: Unknown
COG id: COG3379
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71119; Mature: 70988
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKAKRAALIGYDCLIPKRLEHMLAQGGLENFRKFMNEGSYIPEGFNLPTVTPPSWATI CCCCCCCEEEEEHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE CTGAWPRTHGVEDYYYYHEGRSLDYKETTQAFGSDILTAQTIWDAWDKAGKKCLVINYPM ECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCC SWPSKMDKGVMIMGEGLSPAETRWPLHGNEHKEFLCSESVISTDYYPMGAQGVFDDAKGW CCCCCCCCCEEEEECCCCCHHCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCCCCCCCCC KNLPEGDEPLEMTVNMTFKESIEPIEDQVWHCLVWQSEDDGYDRMALCPEKDYAKAFFTI CCCCCCCCCEEEEEEEEHHHCCCCHHHCCEEEEEECCCCCCCCCEEECCCHHHCEEEEEE TLGAWSEPVQHDFTVKADGRTEKGVFRCKLMQLSDDAEEFKLYVSGIAGRCGFVSPAEAA EECCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHEEHHHHHCCCCCCCCHHHHH AHIDFSKDITANDIGLVAYLHGIIDTDTVCELVEFHSAWLWNTISSLIKANPDWDLLYMH EECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SHPIDWFYHGWLSDLDSKDEAVRTRAEKMERHIYEVEDRLLGRLMDIMGDETLMCVCSDH CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC GATPMGPILNTAHALKEAGLCSYEPKKSENYWDIYEETEGFNYVLDVNKSVAVPQRYMFV CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCCCCCEEEEE YVNLKDKYPGGIVEAEDYEKVRDQIIDALLDYKHPETGERPVLLAVRREDAHVFGMGGAQ EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCC AGDVVYVLKPEYMAEHGYGLPTGESGCGSLKNLLMFRGPNIKKGYRYTRPRWLADIVPTF CCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH CYVTGNPIPEDAEGAPIYQIMENPDLVD EEECCCCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure SAKAKRAALIGYDCLIPKRLEHMLAQGGLENFRKFMNEGSYIPEGFNLPTVTPPSWATI CCCCCCEEEEEHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE CTGAWPRTHGVEDYYYYHEGRSLDYKETTQAFGSDILTAQTIWDAWDKAGKKCLVINYPM ECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCC SWPSKMDKGVMIMGEGLSPAETRWPLHGNEHKEFLCSESVISTDYYPMGAQGVFDDAKGW CCCCCCCCCEEEEECCCCCHHCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCCCCCCCCC KNLPEGDEPLEMTVNMTFKESIEPIEDQVWHCLVWQSEDDGYDRMALCPEKDYAKAFFTI CCCCCCCCCEEEEEEEEHHHCCCCHHHCCEEEEEECCCCCCCCCEEECCCHHHCEEEEEE TLGAWSEPVQHDFTVKADGRTEKGVFRCKLMQLSDDAEEFKLYVSGIAGRCGFVSPAEAA EECCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHEEHHHHHCCCCCCCCHHHHH AHIDFSKDITANDIGLVAYLHGIIDTDTVCELVEFHSAWLWNTISSLIKANPDWDLLYMH EECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SHPIDWFYHGWLSDLDSKDEAVRTRAEKMERHIYEVEDRLLGRLMDIMGDETLMCVCSDH CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC GATPMGPILNTAHALKEAGLCSYEPKKSENYWDIYEETEGFNYVLDVNKSVAVPQRYMFV CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCCCCCCEEEEE YVNLKDKYPGGIVEAEDYEKVRDQIIDALLDYKHPETGERPVLLAVRREDAHVFGMGGAQ EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCC AGDVVYVLKPEYMAEHGYGLPTGESGCGSLKNLLMFRGPNIKKGYRYTRPRWLADIVPTF CCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH CYVTGNPIPEDAEGAPIYQIMENPDLVD EEECCCCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA