| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220905590
Identifier: 220905590
GI number: 220905590
Start: 2804638
End: 2805114
Strand: Direct
Name: 220905590
Synonym: Ddes_2330
Alternate gene names: NA
Gene position: 2804638-2805114 (Clockwise)
Preceding gene: 220905589
Following gene: 220905591
Centisome position: 97.61
GC content: 55.56
Gene sequence:
>477_bases ATGTACCCGCGTTTTGTTTTTTCCCTGCTGGCCCTGTGCCTGACCGTTTTTGCCGCCCCTGCGGCCGCCAAAACCTATGA CCTGGCTTTCATAAGCGCCGACATCCCCGATGCATGTCACTTCATGACGCGCGATGGGGCGGTGTTTGTGGTGGATGACG AAGACCACTTTTTCACCATAAATGTTGTCGAACGCGACAAGAACACGAGCCTTGAAGAGTATGCCCAGAAGCTCTCCCGC TCCATCAACGGCGGGCCTGTAAGCAAGGCAGGTGAAGACGCCTGGACTTTCATAGTCAAGGTGGCTGTGGTTCCCTTTGA CGTTCTTGTCATGGGGGATGACGAGCATGTTGTGGAGCTTTTTACCGACCAGAACCGGGCGGATTGGCCCAAAGACATAA AGGGCGCCCTTGATTCCATCAAGGGCAAAACACCGGCGCTGGACAGCCTAGTGCAAAGGGTTCTTGCGCCGCGCTAG
Upstream 100 bases:
>100_bases TTTTTCGCTGCCGGGCGATACAACGAGCGCCGTTGCCGTGTAGTGCAGACGTTCAAGATCAGTTCAGCCCATACCCGGCC CCGCGCCCTGGAGAATAATG
Downstream 100 bases:
>100_bases CCGCGAAAATTCTCTTGCCGGAGCGCTATTTTTTTATGGACAAACAGACAGGCCCGTGAGAATTTCTCACGCATCGAGGA TCATACACAGGAGATCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MYPRFVFSLLALCLTVFAAPAAAKTYDLAFISADIPDACHFMTRDGAVFVVDDEDHFFTINVVERDKNTSLEEYAQKLSR SINGGPVSKAGEDAWTFIVKVAVVPFDVLVMGDDEHVVELFTDQNRADWPKDIKGALDSIKGKTPALDSLVQRVLAPR
Sequences:
>Translated_158_residues MYPRFVFSLLALCLTVFAAPAAAKTYDLAFISADIPDACHFMTRDGAVFVVDDEDHFFTINVVERDKNTSLEEYAQKLSR SINGGPVSKAGEDAWTFIVKVAVVPFDVLVMGDDEHVVELFTDQNRADWPKDIKGALDSIKGKTPALDSLVQRVLAPR >Mature_158_residues MYPRFVFSLLALCLTVFAAPAAAKTYDLAFISADIPDACHFMTRDGAVFVVDDEDHFFTINVVERDKNTSLEEYAQKLSR SINGGPVSKAGEDAWTFIVKVAVVPFDVLVMGDDEHVVELFTDQNRADWPKDIKGALDSIKGKTPALDSLVQRVLAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17467; Mature: 17467
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPRFVFSLLALCLTVFAAPAAAKTYDLAFISADIPDACHFMTRDGAVFVVDDEDHFFTI CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHEECCCEEEEEECCCCEEEE NVVERDKNTSLEEYAQKLSRSINGGPVSKAGEDAWTFIVKVAVVPFDVLVMGDDEHVVEL EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEE FTDQNRADWPKDIKGALDSIKGKTPALDSLVQRVLAPR EECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MYPRFVFSLLALCLTVFAAPAAAKTYDLAFISADIPDACHFMTRDGAVFVVDDEDHFFTI CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHEECCCEEEEEECCCCEEEE NVVERDKNTSLEEYAQKLSRSINGGPVSKAGEDAWTFIVKVAVVPFDVLVMGDDEHVVEL EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCEEEE FTDQNRADWPKDIKGALDSIKGKTPALDSLVQRVLAPR EECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA