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The map label for this gene is yugU [H]

Identifier: 220905577

GI number: 220905577

Start: 2785305

End: 2785721

Strand: Direct

Name: yugU [H]

Synonym: Ddes_2316

Alternate gene names: 220905577

Gene position: 2785305-2785721 (Clockwise)

Preceding gene: 220905576

Following gene: 220905578

Centisome position: 96.93

GC content: 61.39

Gene sequence:

>417_bases
GTGCTGCATCTGGAAATTGAAACAACATGCCGCTGCGACATGCGCGACATCACAACGCAGCTACGCAGCCTGGTGCGGCG
CAATGCCATTGAAAAGGGCTGGCGCAACGGCGTGTTGGCCCTTTTCTGCCCGCACACCACCTGCGGCCTGACAGTCAACG
AAGAGGCAGATCCCGACGTGCGACGCGACATGTTGACCTTTTTCAGCGACCTTGTGCCGCGCCACGGCGATTACCACCAC
GCCGAAGGCAACAGCGACGCCCACATAAAGGCCACCCTGCACGGGCCGTCCCTGACACTCTTTGTGGAAAACGGCGAGCT
GTGCCTCGGCACCTGGCAGTCTGTGTACCTGTGCGAAGGCGATGGCCCGCGCTGCCGCACCATCTGGCTGCAATGGCTTG
CCGGGCAGGAAGAATAA

Upstream 100 bases:

>100_bases
TTGTATACCGAAACCCCCGAAAACCAGCGGGAAGAACTGGACTATATCGCCAGTTCCGACCTGATGGAATTCGCGAGTTT
CTGACAGCAGGAGGCTGCCT

Downstream 100 bases:

>100_bases
TCCCACAGACACACTGCTCCTGCCCGCACCTGTTTTCACCAGCCATGCCGGACACATGCCGCGCAGCTGCGCCAAAGGGG
CCTGCCCCACGGCGGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLHLEIETTCRCDMRDITTQLRSLVRRNAIEKGWRNGVLALFCPHTTCGLTVNEEADPDVRRDMLTFFSDLVPRHGDYHH
AEGNSDAHIKATLHGPSLTLFVENGELCLGTWQSVYLCEGDGPRCRTIWLQWLAGQEE

Sequences:

>Translated_138_residues
MLHLEIETTCRCDMRDITTQLRSLVRRNAIEKGWRNGVLALFCPHTTCGLTVNEEADPDVRRDMLTFFSDLVPRHGDYHH
AEGNSDAHIKATLHGPSLTLFVENGELCLGTWQSVYLCEGDGPRCRTIWLQWLAGQEE
>Mature_138_residues
MLHLEIETTCRCDMRDITTQLRSLVRRNAIEKGWRNGVLALFCPHTTCGLTVNEEADPDVRRDMLTFFSDLVPRHGDYHH
AEGNSDAHIKATLHGPSLTLFVENGELCLGTWQSVYLCEGDGPRCRTIWLQWLAGQEE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=107, Percent_Identity=42.0560747663551, Blast_Score=74, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221476594, Length=78, Percent_Identity=48.7179487179487, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221476589, Length=78, Percent_Identity=48.7179487179487, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15710; Mature: 15710

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLEIETTCRCDMRDITTQLRSLVRRNAIEKGWRNGVLALFCPHTTCGLTVNEEADPDV
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECEEECCCCCCHH
RRDMLTFFSDLVPRHGDYHHAEGNSDAHIKATLHGPSLTLFVENGELCLGTWQSVYLCEG
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCEEEECCCEEEEECC
DGPRCRTIWLQWLAGQEE
CCCCHHHHEEEECCCCCC
>Mature Secondary Structure
MLHLEIETTCRCDMRDITTQLRSLVRRNAIEKGWRNGVLALFCPHTTCGLTVNEEADPDV
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECEEECCCCCCHH
RRDMLTFFSDLVPRHGDYHHAEGNSDAHIKATLHGPSLTLFVENGELCLGTWQSVYLCEG
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCEEEECCCEEEEECC
DGPRCRTIWLQWLAGQEE
CCCCHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]