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The map label for this gene is ydaO [C]

Identifier: 220905538

GI number: 220905538

Start: 2741576

End: 2742487

Strand: Direct

Name: ydaO [C]

Synonym: Ddes_2277

Alternate gene names: 220905538

Gene position: 2741576-2742487 (Clockwise)

Preceding gene: 220905537

Following gene: 220905539

Centisome position: 95.41

GC content: 60.2

Gene sequence:

>912_bases
ATGAAGTGTAAAATCTGCAAAGCCGAGGCCGCAGTAGCCCTGCGCAGCCACAATGCCGCCTTTTGCCCCGACTGCTACAA
GGACTTCTTTTCCCGCCAGGTAACCAGGGGCATTGAAGGACAGAAGCTTTTTACCCGTGACGAGCGTGTGCTCGTGGCCC
TTTCCGGGGGCAAGGATTCCCTTGCCCTCATGCTCGAACTTTCCCGCCAGGGCTACAATGTCACGGGTCTGCACATTGAC
CTGGGCATTCCCGTATCCTCGGCCGCGGCGCGGGGCGTCGTGGAACGCTTTTGCGCCAAGCACGGCCTCAAGCTCATGAT
CAGGGAAATGGCCGCCGAAGGCCTTGCCATTCCTGCGGTCAAGGCGCGCCTGAACCGGCCCGTCTGCTCGGCCTGCGGCA
AGATCAAGCGTCATTTTTTCAACAAGGTCGCGCTGGATGAGGGCTTTGACGCCCTGGCCACCGGACACAACCTTGATGAC
GAAGTGGCCCGTCTTTTCAGCAACACCCTGCGCTGGGACACGGCCTACCTTTCCGATCAGGGACCGCGCCTCGATAGCGA
ACACGGCTTTTCACGCAAGGTCAAACCACTGTGGCGGCTTACGGAATTTGAAACCGCCAACTATGCCTTTCTGATGGGCA
TAGAAAACCACTATGCGCCCTGTCCTTACAGCCCCGGGGCCAGCTTCACCACGCTCAAGGGGCTGCTGCAAAATCTTGAA
GCCGCCATGCCCGGCCGCAAACTGGACTTTTATCAGGGTTTTCTGGCGCGGGGGCGGCCTGTTTTCGCACGGCGCGAAGC
TGAAGAGGGGGTAACCCTTGCCCCCTGTACGCTGTGCGGCTATCCCACATCTTCGGGGGATACCTGCGGCGTCTGCCGCA
TACGCGCAGCCCTGAGCGGGGACAGTGCATAA

Upstream 100 bases:

>100_bases
CTGGCTTGAGCCGGACCATGATGACGCCCACCGGTCTTGAATATAATTACGTACTGAAATACTCTGGCATACCGTTTTCA
AATACAGCCCAGGAACAGCG

Downstream 100 bases:

>100_bases
CGCACCAGAGCAATTTCACTTTATAACTGCCCTGACAGCTTCAAACAAAAATCCCGACCAGTGTTACATGGGCCGGGATT
TTTTGCGCCTGAATGAAGGG

Product: PP-loop domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKCKICKAEAAVALRSHNAAFCPDCYKDFFSRQVTRGIEGQKLFTRDERVLVALSGGKDSLALMLELSRQGYNVTGLHID
LGIPVSSAAARGVVERFCAKHGLKLMIREMAAEGLAIPAVKARLNRPVCSACGKIKRHFFNKVALDEGFDALATGHNLDD
EVARLFSNTLRWDTAYLSDQGPRLDSEHGFSRKVKPLWRLTEFETANYAFLMGIENHYAPCPYSPGASFTTLKGLLQNLE
AAMPGRKLDFYQGFLARGRPVFARREAEEGVTLAPCTLCGYPTSSGDTCGVCRIRAALSGDSA

Sequences:

>Translated_303_residues
MKCKICKAEAAVALRSHNAAFCPDCYKDFFSRQVTRGIEGQKLFTRDERVLVALSGGKDSLALMLELSRQGYNVTGLHID
LGIPVSSAAARGVVERFCAKHGLKLMIREMAAEGLAIPAVKARLNRPVCSACGKIKRHFFNKVALDEGFDALATGHNLDD
EVARLFSNTLRWDTAYLSDQGPRLDSEHGFSRKVKPLWRLTEFETANYAFLMGIENHYAPCPYSPGASFTTLKGLLQNLE
AAMPGRKLDFYQGFLARGRPVFARREAEEGVTLAPCTLCGYPTSSGDTCGVCRIRAALSGDSA
>Mature_303_residues
MKCKICKAEAAVALRSHNAAFCPDCYKDFFSRQVTRGIEGQKLFTRDERVLVALSGGKDSLALMLELSRQGYNVTGLHID
LGIPVSSAAARGVVERFCAKHGLKLMIREMAAEGLAIPAVKARLNRPVCSACGKIKRHFFNKVALDEGFDALATGHNLDD
EVARLFSNTLRWDTAYLSDQGPRLDSEHGFSRKVKPLWRLTEFETANYAFLMGIENHYAPCPYSPGASFTTLKGLLQNLE
AAMPGRKLDFYQGFLARGRPVFARREAEEGVTLAPCTLCGYPTSSGDTCGVCRIRAALSGDSA

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=263, Percent_Identity=27.3764258555133, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17540090, Length=304, Percent_Identity=30.5921052631579, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24651972, Length=309, Percent_Identity=28.8025889967638, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 33178; Mature: 33178

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCKICKAEAAVALRSHNAAFCPDCYKDFFSRQVTRGIEGQKLFTRDERVLVALSGGKDS
CCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCC
LALMLELSRQGYNVTGLHIDLGIPVSSAAARGVVERFCAKHGLKLMIREMAAEGLAIPAV
CHHEEEHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KARLNRPVCSACGKIKRHFFNKVALDEGFDALATGHNLDDEVARLFSNTLRWDTAYLSDQ
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCHHEECCC
GPRLDSEHGFSRKVKPLWRLTEFETANYAFLMGIENHYAPCPYSPGASFTTLKGLLQNLE
CCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
AAMPGRKLDFYQGFLARGRPVFARREAEEGVTLAPCTLCGYPTSSGDTCGVCRIRAALSG
HHCCCCCCHHHHHHHHCCCCEEEHHHHHCCCEECCEEEECCCCCCCCCCCCEEEEEECCC
DSA
CCC
>Mature Secondary Structure
MKCKICKAEAAVALRSHNAAFCPDCYKDFFSRQVTRGIEGQKLFTRDERVLVALSGGKDS
CCCCEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCC
LALMLELSRQGYNVTGLHIDLGIPVSSAAARGVVERFCAKHGLKLMIREMAAEGLAIPAV
CHHEEEHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KARLNRPVCSACGKIKRHFFNKVALDEGFDALATGHNLDDEVARLFSNTLRWDTAYLSDQ
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCHHEECCC
GPRLDSEHGFSRKVKPLWRLTEFETANYAFLMGIENHYAPCPYSPGASFTTLKGLLQNLE
CCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
AAMPGRKLDFYQGFLARGRPVFARREAEEGVTLAPCTLCGYPTSSGDTCGVCRIRAALSG
HHCCCCCCHHHHHHHHCCCCEEEHHHHHCCCEECCEEEECCCCCCCCCCCCEEEEEECCC
DSA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]