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The map label for this gene is ubiX [C]

Identifier: 220905539

GI number: 220905539

Start: 2743146

End: 2743802

Strand: Direct

Name: ubiX [C]

Synonym: Ddes_2278

Alternate gene names: 220905539

Gene position: 2743146-2743802 (Clockwise)

Preceding gene: 220905538

Following gene: 220905540

Centisome position: 95.47

GC content: 66.21

Gene sequence:

>657_bases
ATGACAAGCGCCATATCCCCAACCGCTGCGGCAGACCAGACAGACAACCGCGCCGCCATGCCCGCTCTTTCGCCCGGCAC
CCGGCCGCGCGACATTCTGGTGGGCGTCAGCGGCGCCAGCGGCATGCCGCTGGCGGCATGTCTGCTGCGCAGCCTGGCGG
CCATGCCCCATGTGCGTGTTCACTGCATCATTTCGCAAGGCGCGCATGCGGTCTTGCGCGCCGAGTGCGAATCCGGCCCG
GAGCTACTCGCCCAGTACGCGCACCACGTTCACGACGCGGAAAACCTGGGGGCCGGGCCCTCCAGCGGCTCATGGTGGCG
GCGCGGTCCTGAGCCTGCGGCCATGATCCTTGCGCCGTGCTCAATGGGTACACTCGGGGCCATAGCCTCGGGAGCCACAC
GCAACCTCGTGCAGCGTTCGGCGGATGTGGCCCTCAAAGAGCGGCTGCCGCTGGTGCTGGTCCCGAGGGAAAGCCCGCTT
TCGGCCATTCACCTGCGCAACATGCTTGCCCTGCATGAAGCCGGAGCAGTTATCATGCCCCTCTGCCCGGGCTTCTATCT
TAAACCCCAAAGCGTGGATGACCTGCTGCTGCACCTGTGCGGCAGAATTTTCGACCAGCTAGGCCTGCCGCACAATCTGG
GCCGATGGCCGGGCTAA

Upstream 100 bases:

>100_bases
CCTCCCGCGGGCCGACCTTGCAGCAGGCCGGCGCCGCAGGACTTTTGCCAGTTTGCGTGCAACCTTCTTGTCAGGTATGC
AAGCAGCAGGGAGAATAATC

Downstream 100 bases:

>100_bases
CTGCAACACGTACGGAACACCGCACTCCAGCCGCCTCAGGCTTTCCGCCACCCCAAACAGCAGCAGACCTGCGCAGGCTC
CGCAATATTTACAGTTTGCG

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTSAISPTAAADQTDNRAAMPALSPGTRPRDILVGVSGASGMPLAACLLRSLAAMPHVRVHCIISQGAHAVLRAECESGP
ELLAQYAHHVHDAENLGAGPSSGSWWRRGPEPAAMILAPCSMGTLGAIASGATRNLVQRSADVALKERLPLVLVPRESPL
SAIHLRNMLALHEAGAVIMPLCPGFYLKPQSVDDLLLHLCGRIFDQLGLPHNLGRWPG

Sequences:

>Translated_218_residues
MTSAISPTAAADQTDNRAAMPALSPGTRPRDILVGVSGASGMPLAACLLRSLAAMPHVRVHCIISQGAHAVLRAECESGP
ELLAQYAHHVHDAENLGAGPSSGSWWRRGPEPAAMILAPCSMGTLGAIASGATRNLVQRSADVALKERLPLVLVPRESPL
SAIHLRNMLALHEAGAVIMPLCPGFYLKPQSVDDLLLHLCGRIFDQLGLPHNLGRWPG
>Mature_217_residues
TSAISPTAAADQTDNRAAMPALSPGTRPRDILVGVSGASGMPLAACLLRSLAAMPHVRVHCIISQGAHAVLRAECESGPE
LLAQYAHHVHDAENLGAGPSSGSWWRRGPEPAAMILAPCSMGTLGAIASGATRNLVQRSADVALKERLPLVLVPRESPLS
AIHLRNMLALHEAGAVIMPLCPGFYLKPQSVDDLLLHLCGRIFDQLGLPHNLGRWPG

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=192, Percent_Identity=41.1458333333333, Blast_Score=135, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6320746, Length=218, Percent_Identity=38.5321100917431, Blast_Score=143, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22952; Mature: 22821

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAISPTAAADQTDNRAAMPALSPGTRPRDILVGVSGASGMPLAACLLRSLAAMPHVRV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEE
HCIISQGAHAVLRAECESGPELLAQYAHHVHDAENLGAGPSSGSWWRRGPEPAAMILAPC
EEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCEEEEECC
SMGTLGAIASGATRNLVQRSADVALKERLPLVLVPRESPLSAIHLRNMLALHEAGAVIMP
CCCHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEE
LCPGFYLKPQSVDDLLLHLCGRIFDQLGLPHNLGRWPG
CCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSAISPTAAADQTDNRAAMPALSPGTRPRDILVGVSGASGMPLAACLLRSLAAMPHVRV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEE
HCIISQGAHAVLRAECESGPELLAQYAHHVHDAENLGAGPSSGSWWRRGPEPAAMILAPC
EEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCEEEEECC
SMGTLGAIASGATRNLVQRSADVALKERLPLVLVPRESPLSAIHLRNMLALHEAGAVIMP
CCCHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEE
LCPGFYLKPQSVDDLLLHLCGRIFDQLGLPHNLGRWPG
CCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11029001 [H]