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The map label for this gene is exoB [H]

Identifier: 220905464

GI number: 220905464

Start: 2654776

End: 2656011

Strand: Direct

Name: exoB [H]

Synonym: Ddes_2202

Alternate gene names: 220905464

Gene position: 2654776-2656011 (Clockwise)

Preceding gene: 220905463

Following gene: 220905465

Centisome position: 92.39

GC content: 66.34

Gene sequence:

>1236_bases
ATGAGCGCGGCGGCTCACGGTACAGGTATGAACACATTTTCTGACGTTGCGGGCAAGACCGCCCCCAGCCAGGCAGACAA
ACCGGCAAAAAGCCAGCCAGACGGCCGGGCAGACCATCAGCCGGGGCAGAATACAGGCTGCGCCGGCACCGGCCATCTCA
CGGGCGTCAGGGTGCTGCTCACTGGCGGAACCGGCTTTGTGGGGCGGCACCTGTTGCCGCAACTGCTTGAAGCCGGGGCG
CAGGTGACCTGCCTCACGCGCTCAAGCTCGCACATTGCCCACCTGCCCCAAGGCGTGGCTGTGGCCCAGGCGGATCTCGG
CAGCGGGCGCGGCCTGGCCGAAGCGCTTAAGGGGCAGGACATGGTCATACACATGGCCGCACTGCTTTTCGGCCTGGGCT
GGCAGGACTACCTGCGCGCCAATGCCCGCGCCGCCCGCAGCCTGGCAGATGCCGTCATGCGGGCCGACAGGGCTGCGTGT
ACCGGCGAAAATGGGGGGAGCAAAGGCATCCGCCGTTTTGTGCTGGTGTCCAGCCTGGCTGCCACCGGTCCCTGCGGCAC
AGCCCCCGGTGTGGAAGACGATACACCGCCTACGCCCGTTTCCGCATACGGCTGGTCAAAAATGCTTACCGAGCAGATTC
TGGGGCGCGCCCTGGGCGACCGCCTGGTCACCCTGCGCCCGCCCATCATTTATGGCTCCGGCGACAAGGGTCTGCTGCCC
GTGTTCAAGGGCGTCATGTCCGGTCTGGCTGTCAGTCCCGGCGCGGGGCGGGAATTTCCCGTCAGCGCCATACACGCCCG
CGACATGGGGCAGGCCGTCATTTGCGCCTGCCGCCCCGAAGCAACGGGCGTCTACCACCTCAGCGACGGTCAGGAACACA
CCATGAGCAGCTTTTGCCGCATCATGGGATCTGCGGTGGACAAGGCCCTTGAACGCGAACCGCGGCGGGTGCGCGTCATC
CGCATGCCCCTGCCCGTCATGGCGCTCACCGCCGGGCTGTCTTCGGCTTTCGGCATTATGGCTGACGCCCTGCTGGCCCG
GCTGCCCGCCCGCTTCGGCGGACGTCTGCGCCGCGCACCCAACTGGAATATGGACAAATACCGCGAAGCCCGTCAGGCGG
GCTGGCTGTGTAACGGCAGCCGCATACGGCGCGAACTTGGTTTCACGCCGTGCATGAGCCTTGAGGCGGGAATGAAAGAA
GCTGTAGAAGGCTACCGCCGTGAGGGCTGGTTGTGA

Upstream 100 bases:

>100_bases
CGTGGGTCCTTGAAGACAACGTGGCCGTCAACGATCTTATCGAAGATTTTTCAGGCCGCCTCACCAAGCGCTACCGCATC
TACCGCAGGGAGATCGGGGC

Downstream 100 bases:

>100_bases
AGATAACGATTCAGGAACTTTCCAAGTCATTTGGCGGCCGGGATATTTTCAGCAATTTTTCGCTGGAGGTGGACTCCGGC
GTGCGTTTGTGCGTGTGCGG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSAAAHGTGMNTFSDVAGKTAPSQADKPAKSQPDGRADHQPGQNTGCAGTGHLTGVRVLLTGGTGFVGRHLLPQLLEAGA
QVTCLTRSSSHIAHLPQGVAVAQADLGSGRGLAEALKGQDMVIHMAALLFGLGWQDYLRANARAARSLADAVMRADRAAC
TGENGGSKGIRRFVLVSSLAATGPCGTAPGVEDDTPPTPVSAYGWSKMLTEQILGRALGDRLVTLRPPIIYGSGDKGLLP
VFKGVMSGLAVSPGAGREFPVSAIHARDMGQAVICACRPEATGVYHLSDGQEHTMSSFCRIMGSAVDKALEREPRRVRVI
RMPLPVMALTAGLSSAFGIMADALLARLPARFGGRLRRAPNWNMDKYREARQAGWLCNGSRIRRELGFTPCMSLEAGMKE
AVEGYRREGWL

Sequences:

>Translated_411_residues
MSAAAHGTGMNTFSDVAGKTAPSQADKPAKSQPDGRADHQPGQNTGCAGTGHLTGVRVLLTGGTGFVGRHLLPQLLEAGA
QVTCLTRSSSHIAHLPQGVAVAQADLGSGRGLAEALKGQDMVIHMAALLFGLGWQDYLRANARAARSLADAVMRADRAAC
TGENGGSKGIRRFVLVSSLAATGPCGTAPGVEDDTPPTPVSAYGWSKMLTEQILGRALGDRLVTLRPPIIYGSGDKGLLP
VFKGVMSGLAVSPGAGREFPVSAIHARDMGQAVICACRPEATGVYHLSDGQEHTMSSFCRIMGSAVDKALEREPRRVRVI
RMPLPVMALTAGLSSAFGIMADALLARLPARFGGRLRRAPNWNMDKYREARQAGWLCNGSRIRRELGFTPCMSLEAGMKE
AVEGYRREGWL
>Mature_410_residues
SAAAHGTGMNTFSDVAGKTAPSQADKPAKSQPDGRADHQPGQNTGCAGTGHLTGVRVLLTGGTGFVGRHLLPQLLEAGAQ
VTCLTRSSSHIAHLPQGVAVAQADLGSGRGLAEALKGQDMVIHMAALLFGLGWQDYLRANARAARSLADAVMRADRAACT
GENGGSKGIRRFVLVSSLAATGPCGTAPGVEDDTPPTPVSAYGWSKMLTEQILGRALGDRLVTLRPPIIYGSGDKGLLPV
FKGVMSGLAVSPGAGREFPVSAIHARDMGQAVICACRPEATGVYHLSDGQEHTMSSFCRIMGSAVDKALEREPRRVRVIR
MPLPVMALTAGLSSAFGIMADALLARLPARFGGRLRRAPNWNMDKYREARQAGWLCNGSRIRRELGFTPCMSLEAGMKEA
VEGYRREGWL

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR005886
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 43350; Mature: 43219

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAAHGTGMNTFSDVAGKTAPSQADKPAKSQPDGRADHQPGQNTGCAGTGHLTGVRVLL
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
TGGTGFVGRHLLPQLLEAGAQVTCLTRSSSHIAHLPQGVAVAQADLGSGRGLAEALKGQD
ECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCEEEHHCCCCCCCHHHHHCCCH
MVIHMAALLFGLGWQDYLRANARAARSLADAVMRADRAACTGENGGSKGIRRFVLVSSLA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ATGPCGTAPGVEDDTPPTPVSAYGWSKMLTEQILGRALGDRLVTLRPPIIYGSGDKGLLP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCCHHH
VFKGVMSGLAVSPGAGREFPVSAIHARDMGQAVICACRPEATGVYHLSDGQEHTMSSFCR
HHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHH
IMGSAVDKALEREPRRVRVIRMPLPVMALTAGLSSAFGIMADALLARLPARFGGRLRRAP
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NWNMDKYREARQAGWLCNGSRIRRELGFTPCMSLEAGMKEAVEGYRREGWL
CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAAAHGTGMNTFSDVAGKTAPSQADKPAKSQPDGRADHQPGQNTGCAGTGHLTGVRVLL
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
TGGTGFVGRHLLPQLLEAGAQVTCLTRSSSHIAHLPQGVAVAQADLGSGRGLAEALKGQD
ECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCEEEHHCCCCCCCHHHHHCCCH
MVIHMAALLFGLGWQDYLRANARAARSLADAVMRADRAACTGENGGSKGIRRFVLVSSLA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ATGPCGTAPGVEDDTPPTPVSAYGWSKMLTEQILGRALGDRLVTLRPPIIYGSGDKGLLP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCCHHH
VFKGVMSGLAVSPGAGREFPVSAIHARDMGQAVICACRPEATGVYHLSDGQEHTMSSFCR
HHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHH
IMGSAVDKALEREPRRVRVIRMPLPVMALTAGLSSAFGIMADALLARLPARFGGRLRRAP
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NWNMDKYREARQAGWLCNGSRIRRELGFTPCMSLEAGMKEAVEGYRREGWL
CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8026752 [H]