Click here to switch to the map view.

The map label for this gene is atpC [H]

Identifier: 220905451

GI number: 220905451

Start: 2640384

End: 2640788

Strand: Direct

Name: atpC [H]

Synonym: Ddes_2189

Alternate gene names: 220905451

Gene position: 2640384-2640788 (Clockwise)

Preceding gene: 220905450

Following gene: 220905455

Centisome position: 91.89

GC content: 59.75

Gene sequence:

>405_bases
ATGGGCACACTGCAACTGGAAGTGGTGACGCCGGACAAAACCGTGGTCAGCGGCGAAGTTGAAATGGCCGTTTGCCCCGG
AATTGAAGGCGAATTCGGCGTGCTGCCCAAGCACGTCTCCCTGCTCTCCGCTCTCAAGACTGGTGGCCTGCGTTACAAGA
CGCCGGGCGGCAAGGAAGAGTACGTTTTCATATCCGGCGGCTTTGCCGACGTAAATAATGATGTGCTCACCGTGCTGGCC
GAATCTGCCGAACTGGCGCAGGATATAGACACCGCAAGAGCCATGGCCGCCAAAGAACGCGCCGAAAAGCGTATTGCCGA
CCATGCCGAGCAGACCGATGTAACCCGCGCTGAAGCGGCCTTGCACCGGGCTTTGATCCGCCTGCAAGTGGCCCAGCTGC
GCTGA

Upstream 100 bases:

>100_bases
GCAGGAAGAAAACTAAGAGCGTTGACGCCTGTCATGCGGCCGGGCACGCAGCCCGGCCGCATGACAGCCATAGCTGGCAT
ACAGGAGCGAAGGAGTACCT

Downstream 100 bases:

>100_bases
CCACAAGTGTTTCGTATCAAAGGCCGCGTGTTGCGCAAGCATAACGCGGCCTTTTTCTTTGCCCGCCGACATGCTCCCAC
ACGCCGCACGGAGGGGCAGG

Product: ATP synthase F1 subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MGTLQLEVVTPDKTVVSGEVEMAVCPGIEGEFGVLPKHVSLLSALKTGGLRYKTPGGKEEYVFISGGFADVNNDVLTVLA
ESAELAQDIDTARAMAAKERAEKRIADHAEQTDVTRAEAALHRALIRLQVAQLR

Sequences:

>Translated_134_residues
MGTLQLEVVTPDKTVVSGEVEMAVCPGIEGEFGVLPKHVSLLSALKTGGLRYKTPGGKEEYVFISGGFADVNNDVLTVLA
ESAELAQDIDTARAMAAKERAEKRIADHAEQTDVTRAEAALHRALIRLQVAQLR
>Mature_133_residues
GTLQLEVVTPDKTVVSGEVEMAVCPGIEGEFGVLPKHVSLLSALKTGGLRYKTPGGKEEYVFISGGFADVNNDVLTVLAE
SAELAQDIDTARAMAAKERAEKRIADHAEQTDVTRAEAALHRALIRLQVAQLR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

Organism=Escherichia coli, GI1790169, Length=131, Percent_Identity=40.4580152671756, Blast_Score=97, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14

Molecular weight: Translated: 14373; Mature: 14241

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTLQLEVVTPDKTVVSGEVEMAVCPGIEGEFGVLPKHVSLLSALKTGGLRYKTPGGKEE
CCEEEEEEECCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCC
YVFISGGFADVNNDVLTVLAESAELAQDIDTARAMAAKERAEKRIADHAEQTDVTRAEAA
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHRALIRLQVAQLR
HHHHHHHHHHHHCC
>Mature Secondary Structure 
GTLQLEVVTPDKTVVSGEVEMAVCPGIEGEFGVLPKHVSLLSALKTGGLRYKTPGGKEE
CEEEEEEECCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCC
YVFISGGFADVNNDVLTVLAESAELAQDIDTARAMAAKERAEKRIADHAEQTDVTRAEAA
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHRALIRLQVAQLR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA