Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905440

Identifier: 220905440

GI number: 220905440

Start: 2627782

End: 2629869

Strand: Direct

Name: 220905440

Synonym: Ddes_2178

Alternate gene names: NA

Gene position: 2627782-2629869 (Clockwise)

Preceding gene: 220905430

Following gene: 220905441

Centisome position: 91.45

GC content: 62.36

Gene sequence:

>2088_bases
ATGAAACGCTTTCTGCTCTGGACAATGGGTATCGTGCTGGCAGCCGTTGCTGTTCTGGCCGTCATGCTCGGCCGGATGGA
CACGGACTTCGTGATCCGGCAGATCGCCGACGCCACGGCCGGGGCCACAGGCAAGCCCCTTGTGTTTGAAAGTTCGCCGA
AAATATCCTTTTTTCCTCCCGGCGTCAGTTTTGGGCAGGCCCGGTGGGGACAGGCGGAGCAGGACGACAGTCTTGCCGTT
TCCGTCAAGGGCGGCATGGCCGAACTTGAATTCATGCCGCTGCTGTCCGGCAATGTGGTCCTGCGCGAGGTCCGGCTGGA
CAACCCCACGGTCACTGTGCGGCAAAACGCGCAGGTCATAAAAAACGGCAAACAGCCGACAGATGCCGCAGCGGCTGAAA
AGAATGCTGCGGCGGACAACGGGAGCGCCAGAGAGAACACCAGCCCCGCCAAAAGCGTAAAACCGGACGCCGCGCCCCGT
GACGCCGCGCCGCCCGTCGAGCTTAAGCGTCTGGTCATACGCCAGGGGTCTCTGAATATTACCGATACGCAGGGGCAGGA
CATCAAGATCAGTGACCTGAATATTTCTGCAGAAAATCTGCGCCCGGAGCAGGAAACAACTGCCAGGTGCGACTTTACCA
TCGCCCTGGGCGACGCTCCGGGAACACCCGGGCATATCTCGGGCAACCTGGCCCTGTCGGCCAAGCTCCGCTATGCGCCA
CCCATGCTCACCCTGCGCCAGGCATCCCTGACGTTCAACCCGCTTTCCGGCCCACTGCCCAAAGAAGCTGGCCCCCTGCA
ACTCAATATTGAAGGCAGCCTGGACCTGAACATCATGCGGATGCGCGTGGACAAGGGCTGGCTTGCCACGCCCCAGGCGC
GCCTGGGCATTCAGGGCGAGGCCGCATTCAGTCCTCCGGCCTTCACCGGCAATGCCGAAATAGACGGCTCACCCCGCAAG
CTCGCGGCCATGGCCGGGCTGAACCTCAAGCCCGTGGCGCAGGGCGTCACAGACGGGCTGAACCTCAAGGCCCGGCTGGC
CTACGGCAATAACAGCCTCAATCTTTCAGATATTCACGCCCGCGTGGATGACATCACCCTGCGCGGCCAGTTCCGCCTGG
GCCTTGAGCCGGGCGCGCCTCTGTCCATAACTGCCGATGTCCAGGTCGGCGCCATCAATCTGGATAATTACCTGCCCCTG
CCCGCAGCCCCAGCAAAAAACAGCAAAACAGACGCAGCGCCCGCAAACGCAAGCACCGCCGCCAGCAAAAAAGAAAAAGG
CGGGACAGGCAAAGCGCCCATGCCGGACATCAATATCCGTCTGGCCCTTGCGGGCCTGAACAAGGACAAACTTCAGCTCC
GTGATATACAACTGGCGGCGCAAGGCCTGCGGGGCAACTACACCATCACCGCCCTTAACGCCATTCTCGGCAGCGGCGGC
AAGGTGCGTGCCACAGGAGCCGCCCGGCTGGCCGACACCGCCAGCCCCGCCTATGCGATCAAAGGCACGGCCTCGGATAT
AAATATGGGCAACCTGCTGGAAAGCCTCGGCAAAGGGCGCCCCCTGAGCGGTACGGCCCTGCTTGAGGCAGACCTGACCA
TGGCCGGAAAAGACGTCACCGCCCTGCAAAACAGCCTTTCCGGCAAAGGGCTGCTCGAAATCCGCCGGGTGCGCCTGGAA
TCCTTACCAACCCTGCCCCAGAACATTCCCGGCCTTCAGGGGCGCGTACCCGACACTTTTGAACTGGTACGCGCGCCCTT
CACCGCGCGAAGCGGCGAAATAAACGCCAATCCGGTCAGTGCCAGCGCACAGGGCCTCAATGCACGGGGACGCGCAGCCA
TAAACCTGCCGCGCCAGCACCTGGACGCCACGGTCAACGTGGAGACACTGGGCATGACCATACCGTTGATCATTCGCGGG
CCGTTCGACAATATCTCGTATTCTGCGGATCCGCGCTTCGCTCTGGACGCCGCCAGCAAGCTGCCCGCCATCTTGCAGGG
CAAAACCTCAAAAAGCGGCACAGACCCGCAGCGACAGGACGACATGCGCGGCGCTGGGGACCTTATACGGGGCCTTTTCG
GACGCTGA

Upstream 100 bases:

>100_bases
GAGCGGCCACGCCCCCGGCCCCTGTGAGGCGGCGCGGAACGGCATGAGCGGCAACAGCGGGCATGCACGGCGGACCGGAA
TACTCTGGAGATAATAAATT

Downstream 100 bases:

>100_bases
TTTCCGGCGCGGACAGCCGAAAACCCTGCATCCCGGCAGGCCGGAGAGCCGTGCAGGATGAAAAGCAGCCAGGGGCGCAC
TGCCGCAGCCGGGCAAAACG

Product: AsmA family protein

Products: NA

Alternate protein names: AsmA Protein

Number of amino acids: Translated: 695; Mature: 695

Protein sequence:

>695_residues
MKRFLLWTMGIVLAAVAVLAVMLGRMDTDFVIRQIADATAGATGKPLVFESSPKISFFPPGVSFGQARWGQAEQDDSLAV
SVKGGMAELEFMPLLSGNVVLREVRLDNPTVTVRQNAQVIKNGKQPTDAAAAEKNAAADNGSARENTSPAKSVKPDAAPR
DAAPPVELKRLVIRQGSLNITDTQGQDIKISDLNISAENLRPEQETTARCDFTIALGDAPGTPGHISGNLALSAKLRYAP
PMLTLRQASLTFNPLSGPLPKEAGPLQLNIEGSLDLNIMRMRVDKGWLATPQARLGIQGEAAFSPPAFTGNAEIDGSPRK
LAAMAGLNLKPVAQGVTDGLNLKARLAYGNNSLNLSDIHARVDDITLRGQFRLGLEPGAPLSITADVQVGAINLDNYLPL
PAAPAKNSKTDAAPANASTAASKKEKGGTGKAPMPDINIRLALAGLNKDKLQLRDIQLAAQGLRGNYTITALNAILGSGG
KVRATGAARLADTASPAYAIKGTASDINMGNLLESLGKGRPLSGTALLEADLTMAGKDVTALQNSLSGKGLLEIRRVRLE
SLPTLPQNIPGLQGRVPDTFELVRAPFTARSGEINANPVSASAQGLNARGRAAINLPRQHLDATVNVETLGMTIPLIIRG
PFDNISYSADPRFALDAASKLPAILQGKTSKSGTDPQRQDDMRGAGDLIRGLFGR

Sequences:

>Translated_695_residues
MKRFLLWTMGIVLAAVAVLAVMLGRMDTDFVIRQIADATAGATGKPLVFESSPKISFFPPGVSFGQARWGQAEQDDSLAV
SVKGGMAELEFMPLLSGNVVLREVRLDNPTVTVRQNAQVIKNGKQPTDAAAAEKNAAADNGSARENTSPAKSVKPDAAPR
DAAPPVELKRLVIRQGSLNITDTQGQDIKISDLNISAENLRPEQETTARCDFTIALGDAPGTPGHISGNLALSAKLRYAP
PMLTLRQASLTFNPLSGPLPKEAGPLQLNIEGSLDLNIMRMRVDKGWLATPQARLGIQGEAAFSPPAFTGNAEIDGSPRK
LAAMAGLNLKPVAQGVTDGLNLKARLAYGNNSLNLSDIHARVDDITLRGQFRLGLEPGAPLSITADVQVGAINLDNYLPL
PAAPAKNSKTDAAPANASTAASKKEKGGTGKAPMPDINIRLALAGLNKDKLQLRDIQLAAQGLRGNYTITALNAILGSGG
KVRATGAARLADTASPAYAIKGTASDINMGNLLESLGKGRPLSGTALLEADLTMAGKDVTALQNSLSGKGLLEIRRVRLE
SLPTLPQNIPGLQGRVPDTFELVRAPFTARSGEINANPVSASAQGLNARGRAAINLPRQHLDATVNVETLGMTIPLIIRG
PFDNISYSADPRFALDAASKLPAILQGKTSKSGTDPQRQDDMRGAGDLIRGLFGR
>Mature_695_residues
MKRFLLWTMGIVLAAVAVLAVMLGRMDTDFVIRQIADATAGATGKPLVFESSPKISFFPPGVSFGQARWGQAEQDDSLAV
SVKGGMAELEFMPLLSGNVVLREVRLDNPTVTVRQNAQVIKNGKQPTDAAAAEKNAAADNGSARENTSPAKSVKPDAAPR
DAAPPVELKRLVIRQGSLNITDTQGQDIKISDLNISAENLRPEQETTARCDFTIALGDAPGTPGHISGNLALSAKLRYAP
PMLTLRQASLTFNPLSGPLPKEAGPLQLNIEGSLDLNIMRMRVDKGWLATPQARLGIQGEAAFSPPAFTGNAEIDGSPRK
LAAMAGLNLKPVAQGVTDGLNLKARLAYGNNSLNLSDIHARVDDITLRGQFRLGLEPGAPLSITADVQVGAINLDNYLPL
PAAPAKNSKTDAAPANASTAASKKEKGGTGKAPMPDINIRLALAGLNKDKLQLRDIQLAAQGLRGNYTITALNAILGSGG
KVRATGAARLADTASPAYAIKGTASDINMGNLLESLGKGRPLSGTALLEADLTMAGKDVTALQNSLSGKGLLEIRRVRLE
SLPTLPQNIPGLQGRVPDTFELVRAPFTARSGEINANPVSASAQGLNARGRAAINLPRQHLDATVNVETLGMTIPLIIRG
PFDNISYSADPRFALDAASKLPAILQGKTSKSGTDPQRQDDMRGAGDLIRGLFGR

Specific function: Unknown

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73016; Mature: 73016

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLLWTMGIVLAAVAVLAVMLGRMDTDFVIRQIADATAGATGKPLVFESSPKISFFPP
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECC
GVSFGQARWGQAEQDDSLAVSVKGGMAELEFMPLLSGNVVLREVRLDNPTVTVRQNAQVI
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEECCCCEEEEECCHHHH
KNGKQPTDAAAAEKNAAADNGSARENTSPAKSVKPDAAPRDAAPPVELKRLVIRQGSLNI
HCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE
TDTQGQDIKISDLNISAENLRPEQETTARCDFTIALGDAPGTPGHISGNLALSAKLRYAP
ECCCCCEEEEEEEEEEHHHCCCCCCCCCEEEEEEEECCCCCCCCEECCCEEEEEEEECCC
PMLTLRQASLTFNPLSGPLPKEAGPLQLNIEGSLDLNIMRMRVDKGWLATPQARLGIQGE
CCEEEEECEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHHCCCCCC
AAFSPPAFTGNAEIDGSPRKLAAMAGLNLKPVAQGVTDGLNLKARLAYGNNSLNLSDIHA
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCEEEEEEECCCCCCHHHHHE
RVDDITLRGQFRLGLEPGAPLSITADVQVGAINLDNYLPLPAAPAKNSKTDAAPANASTA
EEEEEEEEEEEEECCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
ASKKEKGGTGKAPMPDINIRLALAGLNKDKLQLRDIQLAAQGLRGNYTITALNAILGSGG
HHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHCCCCCEEEEEEHHHHCCCC
KVRATGAARLADTASPAYAIKGTASDINMGNLLESLGKGRPLSGTALLEADLTMAGKDVT
EEEECCCHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEECCEECCCHHH
ALQNSLSGKGLLEIRRVRLESLPTLPQNIPGLQGRVPDTFELVRAPFTARSGEINANPVS
HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
ASAQGLNARGRAAINLPRQHLDATVNVETLGMTIPLIIRGPFDNISYSADPRFALDAASK
CCCCCCCCCCCEEEECCHHHCCCEEEEEEECEEEEEEEECCCCCCCCCCCCCEEEHHHHH
LPAILQGKTSKSGTDPQRQDDMRGAGDLIRGLFGR
CCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MKRFLLWTMGIVLAAVAVLAVMLGRMDTDFVIRQIADATAGATGKPLVFESSPKISFFPP
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECC
GVSFGQARWGQAEQDDSLAVSVKGGMAELEFMPLLSGNVVLREVRLDNPTVTVRQNAQVI
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEECCCCEEEEECCHHHH
KNGKQPTDAAAAEKNAAADNGSARENTSPAKSVKPDAAPRDAAPPVELKRLVIRQGSLNI
HCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE
TDTQGQDIKISDLNISAENLRPEQETTARCDFTIALGDAPGTPGHISGNLALSAKLRYAP
ECCCCCEEEEEEEEEEHHHCCCCCCCCCEEEEEEEECCCCCCCCEECCCEEEEEEEECCC
PMLTLRQASLTFNPLSGPLPKEAGPLQLNIEGSLDLNIMRMRVDKGWLATPQARLGIQGE
CCEEEEECEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCHHHCCCCCC
AAFSPPAFTGNAEIDGSPRKLAAMAGLNLKPVAQGVTDGLNLKARLAYGNNSLNLSDIHA
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCEEEEEEECCCCCCHHHHHE
RVDDITLRGQFRLGLEPGAPLSITADVQVGAINLDNYLPLPAAPAKNSKTDAAPANASTA
EEEEEEEEEEEEECCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHH
ASKKEKGGTGKAPMPDINIRLALAGLNKDKLQLRDIQLAAQGLRGNYTITALNAILGSGG
HHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHCCCCCEEEEEEHHHHCCCC
KVRATGAARLADTASPAYAIKGTASDINMGNLLESLGKGRPLSGTALLEADLTMAGKDVT
EEEECCCHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEECCEECCCHHH
ALQNSLSGKGLLEIRRVRLESLPTLPQNIPGLQGRVPDTFELVRAPFTARSGEINANPVS
HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
ASAQGLNARGRAAINLPRQHLDATVNVETLGMTIPLIIRGPFDNISYSADPRFALDAASK
CCCCCCCCCCCEEEECCHHHCCCEEEEEEECEEEEEEEECCCCCCCCCCCCCEEEHHHHH
LPAILQGKTSKSGTDPQRQDDMRGAGDLIRGLFGR
CCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA