Click here to switch to the map view.

The map label for this gene is yibN [C]

Identifier: 220905352

GI number: 220905352

Start: 2517898

End: 2518311

Strand: Direct

Name: yibN [C]

Synonym: Ddes_2090

Alternate gene names: 220905352

Gene position: 2517898-2518311 (Clockwise)

Preceding gene: 220905351

Following gene: 220905353

Centisome position: 87.63

GC content: 58.94

Gene sequence:

>414_bases
ATGCCACACAGCATGCAAAACAGCGTATCCCGCCGTTTTCTCTGCGCCTTTGCCCTGCTCACCCTCGTCATGCTTGCGGC
ATTGCCCGCAGCCGCCCGGGATATAAGCGTGCAGGACGCGGCCGACCTGCTACAGAATCCGCCGCAGGGCCTGATTATTG
TAGACGTGCGCACACCCGCCGAATTCCGTGAGGGACATCTGCCCGGCGCGGTGAACATAGATTACTTTGGCGGGCCGTTT
GAAGCGCAGATTGCCAACCTGCCCAAGGATGCCCCGGTGCTGCTTTACTGCCGCACCGGCAATCGCTCCGCCGGAGCTTA
CAAAAGCATGCAAAAGGCGGGGATCGGGAATATTCTGCACATGAACGAAGGCATCAGCATCTGGCAACAGCGCGGACTGC
CAGTAGAAAAATAG

Upstream 100 bases:

>100_bases
CCGCAAGTGCATGAACCGTCCGCCCCCACTGAAAGCCCACTGAAAACGCCGTGCCAGACGCGCCGGGGCCGGACACAGCA
ACCGAACCGATGGAGTCTTT

Downstream 100 bases:

>100_bases
CTTTCACCAATCTGGCACGCTCTCTGCATTATTGGGGCGGGGAGGAATGTTTTTCCTCCACCGCCCCTATTTTTATGGAG
GCCAGCGTGAATTCGTCACT

Product: Rhodanese domain-containing protein

Products: NA

Alternate protein names: Rhodanese Domain-Containing Protein; Phage Shock Protein E; Rhodanese-Like Domain Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Phage Prohead Protease; Rhodanese Homology Domain Superfamily Protein; Beta-Lactamase Domain Protein; Molybdenum Cofactor Biosynthesis; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MPHSMQNSVSRRFLCAFALLTLVMLAALPAAARDISVQDAADLLQNPPQGLIIVDVRTPAEFREGHLPGAVNIDYFGGPF
EAQIANLPKDAPVLLYCRTGNRSAGAYKSMQKAGIGNILHMNEGISIWQQRGLPVEK

Sequences:

>Translated_137_residues
MPHSMQNSVSRRFLCAFALLTLVMLAALPAAARDISVQDAADLLQNPPQGLIIVDVRTPAEFREGHLPGAVNIDYFGGPF
EAQIANLPKDAPVLLYCRTGNRSAGAYKSMQKAGIGNILHMNEGISIWQQRGLPVEK
>Mature_136_residues
PHSMQNSVSRRFLCAFALLTLVMLAALPAAARDISVQDAADLLQNPPQGLIIVDVRTPAEFREGHLPGAVNIDYFGGPFE
AQIANLPKDAPVLLYCRTGNRSAGAYKSMQKAGIGNILHMNEGISIWQQRGLPVEK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14854; Mature: 14723

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHSMQNSVSRRFLCAFALLTLVMLAALPAAARDISVQDAADLLQNPPQGLIIVDVRTPA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCEEEEEECCCH
EFREGHLPGAVNIDYFGGPFEAQIANLPKDAPVLLYCRTGNRSAGAYKSMQKAGIGNILH
HHHCCCCCCCEEECCCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEE
MNEGISIWQQRGLPVEK
CCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PHSMQNSVSRRFLCAFALLTLVMLAALPAAARDISVQDAADLLQNPPQGLIIVDVRTPA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCEEEEEECCCH
EFREGHLPGAVNIDYFGGPFEAQIANLPKDAPVLLYCRTGNRSAGAYKSMQKAGIGNILH
HHHCCCCCCCEEECCCCCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEE
MNEGISIWQQRGLPVEK
CCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA