| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905304
Identifier: 220905304
GI number: 220905304
Start: 2454868
End: 2455638
Strand: Direct
Name: 220905304
Synonym: Ddes_2042
Alternate gene names: NA
Gene position: 2454868-2455638 (Clockwise)
Preceding gene: 220905303
Following gene: 220905312
Centisome position: 85.43
GC content: 57.46
Gene sequence:
>771_bases GTGCGGCGATTTTATCAAGAAAGCTGGCAGGGCATACCCTTTACGTCCTTTTCGCATATCTCCTTTTTCCATCTGGCGGA ACCCAAGTTCTATGCGGTGTTCTACGAAGAGCTTTTTCGCCGCTACAAAAACTGGGACGATCTGCCCGCTGTCTGGCGCG AAAACAAACGCAAAGACGCCCGCTGGCTCATCGGCCAGTTGCGTGATCAGGTCGCCAGGGAAGCCCAGCCCCGCACAGAG CCTGTGCGTGTGCTGTCTATCGGCAGCGGCGTGGGCTATATGGAAAAAATCCTGCTGGAGGAAATGCCCGAGCTGGAGTT GCACGTCAACGAGCCGAGCACTGTCGGCATGAAATGGCTGCGCCAGCAGATTCCCAGCGAGCGCATCTATATCGGCCTGC CCCCGGCCTGCCTGCCGCCTGATGTCCACTATGACATGATCTATCTTTCCACTGTGGACTACGGCATTCCCACGCGCGAA TTCACCTACCTGCTACAGGAACTGCGCGCCCAGCTGGCCCCCGGCGGAGAGATCATCCTGCTTTCGGCCTCCCTGCTGGA AGAGGATTCCTTTATCGGCAGCTTCGTCAACGCCATAAAGATTGTTATTCGCGGCTTCCTGCATTATCTGGGGATACGGC GTCAGCAATTCTGGGGCTGGCGGCGCACGCGCGATGAATACCGTCAGCTTTTCAAGCAGGCAGGGTGCACCCAGGTGCAG GACGGCTGGCTGCAGGACGGCTTTGAAACCTACTGGATTCGCGGAAAATAG
Upstream 100 bases:
>100_bases CGCATTGCGCCCTGGGGTGGCTTGGGGTATACTTGACAGTGTGTGAAGTGGCTTCGGCGTTGCAATAACGCATACTTGCA GCCATGATCGGAGGCTTGAC
Downstream 100 bases:
>100_bases TTTTCCATCACCGGGCTGAAAACGCCGGGCGCATGAACACGTGCAGCCTTTGCGCCTGAAGCCTGTACATCCGGCATTCC AGGTGCACAGCCTGCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRRFYQESWQGIPFTSFSHISFFHLAEPKFYAVFYEELFRRYKNWDDLPAVWRENKRKDARWLIGQLRDQVAREAQPRTE PVRVLSIGSGVGYMEKILLEEMPELELHVNEPSTVGMKWLRQQIPSERIYIGLPPACLPPDVHYDMIYLSTVDYGIPTRE FTYLLQELRAQLAPGGEIILLSASLLEEDSFIGSFVNAIKIVIRGFLHYLGIRRQQFWGWRRTRDEYRQLFKQAGCTQVQ DGWLQDGFETYWIRGK
Sequences:
>Translated_256_residues MRRFYQESWQGIPFTSFSHISFFHLAEPKFYAVFYEELFRRYKNWDDLPAVWRENKRKDARWLIGQLRDQVAREAQPRTE PVRVLSIGSGVGYMEKILLEEMPELELHVNEPSTVGMKWLRQQIPSERIYIGLPPACLPPDVHYDMIYLSTVDYGIPTRE FTYLLQELRAQLAPGGEIILLSASLLEEDSFIGSFVNAIKIVIRGFLHYLGIRRQQFWGWRRTRDEYRQLFKQAGCTQVQ DGWLQDGFETYWIRGK >Mature_256_residues MRRFYQESWQGIPFTSFSHISFFHLAEPKFYAVFYEELFRRYKNWDDLPAVWRENKRKDARWLIGQLRDQVAREAQPRTE PVRVLSIGSGVGYMEKILLEEMPELELHVNEPSTVGMKWLRQQIPSERIYIGLPPACLPPDVHYDMIYLSTVDYGIPTRE FTYLLQELRAQLAPGGEIILLSASLLEEDSFIGSFVNAIKIVIRGFLHYLGIRRQQFWGWRRTRDEYRQLFKQAGCTQVQ DGWLQDGFETYWIRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30350; Mature: 30350
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFYQESWQGIPFTSFSHISFFHLAEPKFYAVFYEELFRRYKNWDDLPAVWRENKRKDA CCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHH RWLIGQLRDQVAREAQPRTEPVRVLSIGSGVGYMEKILLEEMPELELHVNEPSTVGMKWL HHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHH RQQIPSERIYIGLPPACLPPDVHYDMIYLSTVDYGIPTREFTYLLQELRAQLAPGGEIIL HHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEE LSASLLEEDSFIGSFVNAIKIVIRGFLHYLGIRRQQFWGWRRTRDEYRQLFKQAGCTQVQ EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHCCCCHHH DGWLQDGFETYWIRGK CCHHHCCCEEEEEECC >Mature Secondary Structure MRRFYQESWQGIPFTSFSHISFFHLAEPKFYAVFYEELFRRYKNWDDLPAVWRENKRKDA CCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHH RWLIGQLRDQVAREAQPRTEPVRVLSIGSGVGYMEKILLEEMPELELHVNEPSTVGMKWL HHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHH RQQIPSERIYIGLPPACLPPDVHYDMIYLSTVDYGIPTREFTYLLQELRAQLAPGGEIIL HHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEE LSASLLEEDSFIGSFVNAIKIVIRGFLHYLGIRRQQFWGWRRTRDEYRQLFKQAGCTQVQ EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHCCCCHHH DGWLQDGFETYWIRGK CCHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA