| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220905252
Identifier: 220905252
GI number: 220905252
Start: 2396250
End: 2396654
Strand: Direct
Name: 220905252
Synonym: Ddes_1990
Alternate gene names: NA
Gene position: 2396250-2396654 (Clockwise)
Preceding gene: 220905251
Following gene: 220905257
Centisome position: 83.39
GC content: 52.35
Gene sequence:
>405_bases ATGCCACTTTCCAGTCATCACAAGGCAATGGAAAGATTGTATACAGCCAGTATATCGCAAGCCTCGTCCCGACCTGCGCA AAAGCTTTTTTCACAGGGTCTGAAGCACCTTCTGGAAAACAGCCCGGCCTTTGACGCCTGCGTAGGCGAGGATAATCCCT TTTACCAGGAATTTGTTCTGCAACTTCAAACCAACATCTGCCTGGAAGAAGACTGCCTGAGCCTTTTTGAGTGTCTGGCA ATTTTTTTCCGCCTGCGCCAGATGGCCGCCAACGGGGTTCCGCTTGACGGCATTGAACGCAAGGTGCTTCATTTCTTTGA AACCTGCGGAGAATGGCAACCCCAGGACCCCACCATCGTCAGTTTCTGGTACTGGTGGCGCATCCCCCTGCAGGCGACCC ATTAA
Upstream 100 bases:
>100_bases GCGGGAACTATGGAGCAGAATACCTACCCTTATAGAATAATTTATAATTTATAGAAATTATGCTAAAATAATCCAGAATA ACCAGCCAGAGGAGCCGACT
Downstream 100 bases:
>100_bases CAAGTGTAACCCCGGACCGACTGCTGACGGGCAAAAACATATCCAGTACGTGATTTTCCCATTGCCCGGCAGGCATTGAA CGGCCCAAAGCTGCGGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPLSSHHKAMERLYTASISQASSRPAQKLFSQGLKHLLENSPAFDACVGEDNPFYQEFVLQLQTNICLEEDCLSLFECLA IFFRLRQMAANGVPLDGIERKVLHFFETCGEWQPQDPTIVSFWYWWRIPLQATH
Sequences:
>Translated_134_residues MPLSSHHKAMERLYTASISQASSRPAQKLFSQGLKHLLENSPAFDACVGEDNPFYQEFVLQLQTNICLEEDCLSLFECLA IFFRLRQMAANGVPLDGIERKVLHFFETCGEWQPQDPTIVSFWYWWRIPLQATH >Mature_133_residues PLSSHHKAMERLYTASISQASSRPAQKLFSQGLKHLLENSPAFDACVGEDNPFYQEFVLQLQTNICLEEDCLSLFECLAI FFRLRQMAANGVPLDGIERKVLHFFETCGEWQPQDPTIVSFWYWWRIPLQATH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15508; Mature: 15377
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSSHHKAMERLYTASISQASSRPAQKLFSQGLKHLLENSPAFDACVGEDNPFYQEFVL CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHH QLQTNICLEEDCLSLFECLAIFFRLRQMAANGVPLDGIERKVLHFFETCGEWQPQDPTIV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE SFWYWWRIPLQATH EEHHHHCCCCCCCC >Mature Secondary Structure PLSSHHKAMERLYTASISQASSRPAQKLFSQGLKHLLENSPAFDACVGEDNPFYQEFVL CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHH QLQTNICLEEDCLSLFECLAIFFRLRQMAANGVPLDGIERKVLHFFETCGEWQPQDPTIV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEE SFWYWWRIPLQATH EEHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA