| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905257
Identifier: 220905257
GI number: 220905257
Start: 2402553
End: 2403815
Strand: Direct
Name: 220905257
Synonym: Ddes_1995
Alternate gene names: NA
Gene position: 2402553-2403815 (Clockwise)
Preceding gene: 220905252
Following gene: 220905258
Centisome position: 83.61
GC content: 53.44
Gene sequence:
>1263_bases ATGGTGGAGGGCGCAGCCCGCGCGCCCCACGCGCCAGCCCGGACATGCCGGGCACATGTGCGGCCGGTTGACCGGCCGGT CAGCTTTTCTACAAGAATAAAGTCATATATCTGCGTTTGCCAGCCTTGCATAGGGGATAAGCCCAAAAACTTTGGTATCA CTATCAGACATCAACTGCATTCTCCCCGGTCTCGCGAAAACAAGTTCGTGAAAAATCAGCAACAACCGGAAATAAAAATA TTTTTGCAAGATAATTTTACTGGGCAGAAAAAAGAACGGAAAAAATTTCACCGAATTTCACGGAATGACAACCGGCAGCC GTGGCGCTTCCGGCAGTACAGACGTGCAGTCCCGCCGGCAGGGATCGGGCATGGCGACACAACAGCAAATTCAGATCCAC ATCTCCGGCACAGGCGGATAGTTGCACCAGTACAGCAGTTGTCAGGCGCGCCGTCCTTAACGGTAAAACACATGGTCTGC GGCGCAGGCGTATGCGGCTGCCAGAGCACAAACGCATCGTATTGTGTACCCGCCACAAAAACAGAGATACCGTCATTTTT GAATGCACATTTTAAGATCGCCTTACTCCAGATAGATAAGACCGGAAGGGGTCGCGTCAATGCGGCCGCCAGACCCAGAA GGGCCGAAAAAACGCGGCCAGGCGCGAAACAATGCAACCTGACCGCGTGCAACTGTACTACAGGCTCTCCATCCGGAGTG GCTCAACCCCTGGCCTTCATACGAGCCAGACGGGCGTTAAGAAGACTGTTTTCTTTCCAAAGGCGCCGGTTTTCTTCACT CAGCTCCCTGCGTTCATCTTCCAGGCGCTCAAGCCGCTCCTCAAGTCTGCGGCAACGCGCGCATTCCTGCTGGATCATTT TTCCGTCCGGAACGAACGCAATTCCGTTCTGTGGCATGGATGAAGGTGCAACAACCCCCATCATACCCGGCAGGGTCAAC GTACCGCCTGCCAGTAGCTTTCCCGGCCCGACAGGCCCTTCTTCATCCGATGCAGCCGGGGCGCCTGTACCGAGTAGAAG CCATTCAACAGACACACCGGTTTCCTGGCATATTTTCAGAATAATATCACTGTTTGGCAGATTTTCATCACGCTCATATC CACCGAGTGATCCCTTGCTGACGCCGATTTTTGCTGCAAAAACTTCCTGCGACAATGCTCCTCGCACGAAACGGATGCGA GATCCAAGCGTTTTCATAAGTAATACTATCCCAATGCCCAATCAACTCCGCACCGTCCTGTAA
Upstream 100 bases:
>100_bases CGGTCAGCTTCGGAGCTGAACACGTTTTCCTTGCCGATGAGATCTTCAAAATCCCTGATCAACGCCTGGCTTGCCATGTG GCCTCCTTAGAACATCTGTA
Downstream 100 bases:
>100_bases GATCAAAATATTGCTCACAATCTGAACAGATAGATGAAATTTTAATTCATAATCAATATTCAGGTTGAAATGGCTGAGAT TTTGATCTAATAATGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MVEGAARAPHAPARTCRAHVRPVDRPVSFSTRIKSYICVCQPCIGDKPKNFGITIRHQLHSPRSRENKFVKNQQQPEIKI FLQDNFTGQKKERKKFHRISRNDNRQPWRFRQYRRAVPPAGIGHGDTTANSDPHLRHRRIVAPVQQLSGAPSLTVKHMVC GAGVCGCQSTNASYCVPATKTEIPSFLNAHFKIALLQIDKTGRGRVNAAARPRRAEKTRPGAKQCNLTACNCTTGSPSGV AQPLAFIRARRALRRLFSFQRRRFSSLSSLRSSSRRSSRSSSLRQRAHSCWIIFPSGTNAIPFCGMDEGATTPIIPGRVN VPPASSFPGPTGPSSSDAAGAPVPSRSHSTDTPVSWHIFRIISLFGRFSSRSYPPSDPLLTPIFAAKTSCDNAPRTKRMR DPSVFISNTIPMPNQLRTVL
Sequences:
>Translated_420_residues MVEGAARAPHAPARTCRAHVRPVDRPVSFSTRIKSYICVCQPCIGDKPKNFGITIRHQLHSPRSRENKFVKNQQQPEIKI FLQDNFTGQKKERKKFHRISRNDNRQPWRFRQYRRAVPPAGIGHGDTTANSDPHLRHRRIVAPVQQLSGAPSLTVKHMVC GAGVCGCQSTNASYCVPATKTEIPSFLNAHFKIALLQIDKTGRGRVNAAARPRRAEKTRPGAKQCNLTACNCTTGSPSGV AQPLAFIRARRALRRLFSFQRRRFSSLSSLRSSSRRSSRSSSLRQRAHSCWIIFPSGTNAIPFCGMDEGATTPIIPGRVN VPPASSFPGPTGPSSSDAAGAPVPSRSHSTDTPVSWHIFRIISLFGRFSSRSYPPSDPLLTPIFAAKTSCDNAPRTKRMR DPSVFISNTIPMPNQLRTVL >Mature_420_residues MVEGAARAPHAPARTCRAHVRPVDRPVSFSTRIKSYICVCQPCIGDKPKNFGITIRHQLHSPRSRENKFVKNQQQPEIKI FLQDNFTGQKKERKKFHRISRNDNRQPWRFRQYRRAVPPAGIGHGDTTANSDPHLRHRRIVAPVQQLSGAPSLTVKHMVC GAGVCGCQSTNASYCVPATKTEIPSFLNAHFKIALLQIDKTGRGRVNAAARPRRAEKTRPGAKQCNLTACNCTTGSPSGV AQPLAFIRARRALRRLFSFQRRRFSSLSSLRSSSRRSSRSSSLRQRAHSCWIIFPSGTNAIPFCGMDEGATTPIIPGRVN VPPASSFPGPTGPSSSDAAGAPVPSRSHSTDTPVSWHIFRIISLFGRFSSRSYPPSDPLLTPIFAAKTSCDNAPRTKRMR DPSVFISNTIPMPNQLRTVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46431; Mature: 46431
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEGAARAPHAPARTCRAHVRPVDRPVSFSTRIKSYICVCQPCIGDKPKNFGITIRHQLH CCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHCCCCCCCCCEEEEECCC SPRSRENKFVKNQQQPEIKIFLQDNFTGQKKERKKFHRISRNDNRQPWRFRQYRRAVPPA CCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC GIGHGDTTANSDPHLRHRRIVAPVQQLSGAPSLTVKHMVCGAGVCGCQSTNASYCVPATK CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCEECCCCH TEIPSFLNAHFKIALLQIDKTGRGRVNAAARPRRAEKTRPGAKQCNLTACNCTTGSPSGV HHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCHH AQPLAFIRARRALRRLFSFQRRRFSSLSSLRSSSRRSSRSSSLRQRAHSCWIIFPSGTNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCC IPFCGMDEGATTPIIPGRVNVPPASSFPGPTGPSSSDAAGAPVPSRSHSTDTPVSWHIFR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IISLFGRFSSRSYPPSDPLLTPIFAAKTSCDNAPRTKRMRDPSVFISNTIPMPNQLRTVL HHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHCC >Mature Secondary Structure MVEGAARAPHAPARTCRAHVRPVDRPVSFSTRIKSYICVCQPCIGDKPKNFGITIRHQLH CCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHCCCCCCCCCEEEEECCC SPRSRENKFVKNQQQPEIKIFLQDNFTGQKKERKKFHRISRNDNRQPWRFRQYRRAVPPA CCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC GIGHGDTTANSDPHLRHRRIVAPVQQLSGAPSLTVKHMVCGAGVCGCQSTNASYCVPATK CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCEECCCCH TEIPSFLNAHFKIALLQIDKTGRGRVNAAARPRRAEKTRPGAKQCNLTACNCTTGSPSGV HHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCHH AQPLAFIRARRALRRLFSFQRRRFSSLSSLRSSSRRSSRSSSLRQRAHSCWIIFPSGTNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCC IPFCGMDEGATTPIIPGRVNVPPASSFPGPTGPSSSDAAGAPVPSRSHSTDTPVSWHIFR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IISLFGRFSSRSYPPSDPLLTPIFAAKTSCDNAPRTKRMRDPSVFISNTIPMPNQLRTVL HHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA