| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905201
Identifier: 220905201
GI number: 220905201
Start: 2335807
End: 2336646
Strand: Direct
Name: 220905201
Synonym: Ddes_1939
Alternate gene names: NA
Gene position: 2335807-2336646 (Clockwise)
Preceding gene: 220905200
Following gene: 220905202
Centisome position: 81.29
GC content: 66.55
Gene sequence:
>840_bases ATGAGCAGCAACGCTGAGTTTGAAGCCCTTGCGCGCGAAATGCTGGCCCTGAGCCAGACCAGCGCCCCCGATGCGGACTC CCCGCGCAAAGCTGACGGCCCGGGCCGGGGCGGGGTGCTGGTGGCCCGCCTTTTGCCCGACTTCAACCTGGAGCGCTGGC GGCATTTCTGCCGCGATCACGCCAAGGGGCGCTGGTATGTATGGCCCGCAGGGCCAGACACCCCGCCAGACCTCGCCCAT ATGGACGCCTGCGGCGGTTCGCCGCCTGCCGACGATGCCCTGGTAGCCGGGCTTCTGCTGGAGCAGATCCGGCGCGAGAT GCTGCGCGGTGCGCGCTCCGGCAGCGAGCTCAGCCTCATATGCGCCGCCTTGCCCCAGCGGGATGTAATGGCTCCACAGC TCGGGCAGAACATGACCGCCCTGATGGACGCGGCCCTGGCTGCCAGCCTGCGGGAGCACAGCGAAGCCTGCGACAGCCTG GGGCACCTGGCCTGTGGCAGCTACGCCCTGCTGCTCCCCGGCGTGGGTGCGCTCAGAGCGCGCCTGCTGTCCAGCGCCAT ACAAAAAACCTTTCTGCAGCAAGCCATGCTGCGCTGCGGCAAGCCGGACACAGCCCCGCCCGCCTGCGCACTTGGCATCG CCTGTGCCGATTCCGGCGCGGCCATTACCGCCGAAGCACTGCTGGCAAAGGCGCGCAGCGCCCTGCAGGATGCACTGCTG CAAACACAGCAGCAAAATTCCGGCCGGATCTGCCTTGCAGACAGCACCAGCCTGGAAGAGCGCGCAAGTCTGGTACATTC CAGCGAAAAACGCTTTCTTTTTTTCGGGAGAAACAACTGA
Upstream 100 bases:
>100_bases CTGGTCAAGGATCACCGCACAGGTACAGAGGTCGGAGATGTAGATGCGGTTCTGGACGGGCAGATTGACGCCTTCCAGCA CGACTACCTTTTGCACCGCC
Downstream 100 bases:
>100_bases TGGCAAATAAAACCCTGAGCGTGGCCCTGCTGAGCGGCAAGGGCGGAGTCGGCAAGACCAACATAACGCTCAATATGGCC TGCGCCCTGTACCAGATGGG
Product: putative diguanylate cyclase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSSNAEFEALAREMLALSQTSAPDADSPRKADGPGRGGVLVARLLPDFNLERWRHFCRDHAKGRWYVWPAGPDTPPDLAH MDACGGSPPADDALVAGLLLEQIRREMLRGARSGSELSLICAALPQRDVMAPQLGQNMTALMDAALAASLREHSEACDSL GHLACGSYALLLPGVGALRARLLSSAIQKTFLQQAMLRCGKPDTAPPACALGIACADSGAAITAEALLAKARSALQDALL QTQQQNSGRICLADSTSLEERASLVHSSEKRFLFFGRNN
Sequences:
>Translated_279_residues MSSNAEFEALAREMLALSQTSAPDADSPRKADGPGRGGVLVARLLPDFNLERWRHFCRDHAKGRWYVWPAGPDTPPDLAH MDACGGSPPADDALVAGLLLEQIRREMLRGARSGSELSLICAALPQRDVMAPQLGQNMTALMDAALAASLREHSEACDSL GHLACGSYALLLPGVGALRARLLSSAIQKTFLQQAMLRCGKPDTAPPACALGIACADSGAAITAEALLAKARSALQDALL QTQQQNSGRICLADSTSLEERASLVHSSEKRFLFFGRNN >Mature_278_residues SSNAEFEALAREMLALSQTSAPDADSPRKADGPGRGGVLVARLLPDFNLERWRHFCRDHAKGRWYVWPAGPDTPPDLAHM DACGGSPPADDALVAGLLLEQIRREMLRGARSGSELSLICAALPQRDVMAPQLGQNMTALMDAALAASLREHSEACDSLG HLACGSYALLLPGVGALRARLLSSAIQKTFLQQAMLRCGKPDTAPPACALGIACADSGAAITAEALLAKARSALQDALLQ TQQQNSGRICLADSTSLEERASLVHSSEKRFLFFGRNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29657; Mature: 29526
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNAEFEALAREMLALSQTSAPDADSPRKADGPGRGGVLVARLLPDFNLERWRHFCRDH CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCHHHHHHHHHHC AKGRWYVWPAGPDTPPDLAHMDACGGSPPADDALVAGLLLEQIRREMLRGARSGSELSLI CCCCEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH CAALPQRDVMAPQLGQNMTALMDAALAASLREHSEACDSLGHLACGSYALLLPGVGALRA HHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH RLLSSAIQKTFLQQAMLRCGKPDTAPPACALGIACADSGAAITAEALLAKARSALQDALL HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QTQQQNSGRICLADSTSLEERASLVHSSEKRFLFFGRNN HHHHCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure SSNAEFEALAREMLALSQTSAPDADSPRKADGPGRGGVLVARLLPDFNLERWRHFCRDH CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCHHHHHHHHHHC AKGRWYVWPAGPDTPPDLAHMDACGGSPPADDALVAGLLLEQIRREMLRGARSGSELSLI CCCCEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH CAALPQRDVMAPQLGQNMTALMDAALAASLREHSEACDSLGHLACGSYALLLPGVGALRA HHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH RLLSSAIQKTFLQQAMLRCGKPDTAPPACALGIACADSGAAITAEALLAKARSALQDALL HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QTQQQNSGRICLADSTSLEERASLVHSSEKRFLFFGRNN HHHHCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA