| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is ylxH [H]
Identifier: 220905202
GI number: 220905202
Start: 2336646
End: 2337458
Strand: Direct
Name: ylxH [H]
Synonym: Ddes_1940
Alternate gene names: 220905202
Gene position: 2336646-2337458 (Clockwise)
Preceding gene: 220905201
Following gene: 220905203
Centisome position: 81.32
GC content: 58.92
Gene sequence:
>813_bases ATGGCAAATAAAACCCTGAGCGTGGCCCTGCTGAGCGGCAAGGGCGGAGTCGGCAAGACCAACATAACGCTCAATATGGC CTGCGCCCTGTACCAGATGGGTTTTAAAAACCTGCTGATGGACTGTGATCTGGGCCTCGCCAACCTTGATGTTCTGCTGG GCATCACCCCTGAAGGCAACCTGCAGAATACCCTGCTTGGCGAAGCCGGCATAGGCGATGTGCTGTACCATGTCGAAACA CAGGGTTTCGACGTACTGCCCGCCGCCTCCGGCGTGCCGGAGCTTACCGAGCTTCAGCCCGACATGCGCAACATGCTGCT GGACCGCCTTGAACCGGAGCTGGACAAGTACGACTTTGTTTTTATGGACGTGGGCGCGGGCATTTCCGGCACGGTACAGA CCTTTGCCGCCCTGGCGGCCATGCGCATTGTTGTCATCACTCCCGAACCCACATCGCTCACAGACAGTTACGCCCTCATC AAGGTTCTTAATGCCCGCTACGGCCTGCAGGACTTTATGGTGATCGTCAACCAGGTGGCTTCTGCCAGCGAGGCCAAAGC CTCGTTTGACAAACTGTACGGAGCCTGCCGCCATTTTCTGCACATCGAGCCGGTACTGCTCGGGCATATCCGCGATGACA AGAAAGTTCCCGAAGCCGTGTGCCGCCAGCAGCCGCTTATGCGCATCGCCCCCGGCAGCCCTGCGGCCCAGGACATACAA AATCTGGCCGCACGCCTGCAAAGGCTGCGTCTTGGCATGGCCGACTGGCTGGCCCCCAGAAAGGTGCTGCAGTCCATATC CGCAAAAGGATGA
Upstream 100 bases:
>100_bases CCGGCCGGATCTGCCTTGCAGACAGCACCAGCCTGGAAGAGCGCGCAAGTCTGGTACATTCCAGCGAAAAACGCTTTCTT TTTTTCGGGAGAAACAACTG
Downstream 100 bases:
>100_bases AGAAGACGGCCTAAAAACCACGCGGACTGTTTACCTTGTTGCATAAAAGGTATAGAGATGCATTAATACTAGATGCCTAT CGTTAGCCCTTGGGCATTCA
Product: Cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MANKTLSVALLSGKGGVGKTNITLNMACALYQMGFKNLLMDCDLGLANLDVLLGITPEGNLQNTLLGEAGIGDVLYHVET QGFDVLPAASGVPELTELQPDMRNMLLDRLEPELDKYDFVFMDVGAGISGTVQTFAALAAMRIVVITPEPTSLTDSYALI KVLNARYGLQDFMVIVNQVASASEAKASFDKLYGACRHFLHIEPVLLGHIRDDKKVPEAVCRQQPLMRIAPGSPAAQDIQ NLAARLQRLRLGMADWLAPRKVLQSISAKG
Sequences:
>Translated_270_residues MANKTLSVALLSGKGGVGKTNITLNMACALYQMGFKNLLMDCDLGLANLDVLLGITPEGNLQNTLLGEAGIGDVLYHVET QGFDVLPAASGVPELTELQPDMRNMLLDRLEPELDKYDFVFMDVGAGISGTVQTFAALAAMRIVVITPEPTSLTDSYALI KVLNARYGLQDFMVIVNQVASASEAKASFDKLYGACRHFLHIEPVLLGHIRDDKKVPEAVCRQQPLMRIAPGSPAAQDIQ NLAARLQRLRLGMADWLAPRKVLQSISAKG >Mature_269_residues ANKTLSVALLSGKGGVGKTNITLNMACALYQMGFKNLLMDCDLGLANLDVLLGITPEGNLQNTLLGEAGIGDVLYHVETQ GFDVLPAASGVPELTELQPDMRNMLLDRLEPELDKYDFVFMDVGAGISGTVQTFAALAAMRIVVITPEPTSLTDSYALIK VLNARYGLQDFMVIVNQVASASEAKASFDKLYGACRHFLHIEPVLLGHIRDDKKVPEAVCRQQPLMRIAPGSPAAQDIQN LAARLQRLRLGMADWLAPRKVLQSISAKG
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=162, Percent_Identity=30.2469135802469, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29179; Mature: 29048
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKTLSVALLSGKGGVGKTNITLNMACALYQMGFKNLLMDCDLGLANLDVLLGITPEGN CCCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC LQNTLLGEAGIGDVLYHVETQGFDVLPAASGVPELTELQPDMRNMLLDRLEPELDKYDFV CCHHHCCCCCCCCEEEEEECCCCEECCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEE FMDVGAGISGTVQTFAALAAMRIVVITPEPTSLTDSYALIKVLNARYGLQDFMVIVNQVA EEECCCCCCHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH SASEAKASFDKLYGACRHFLHIEPVLLGHIRDDKKVPEAVCRQQPLMRIAPGSPAAQDIQ HHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHCCCCCEEECCCCCHHHHHH NLAARLQRLRLGMADWLAPRKVLQSISAKG HHHHHHHHHHHCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ANKTLSVALLSGKGGVGKTNITLNMACALYQMGFKNLLMDCDLGLANLDVLLGITPEGN CCCEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC LQNTLLGEAGIGDVLYHVETQGFDVLPAASGVPELTELQPDMRNMLLDRLEPELDKYDFV CCHHHCCCCCCCCEEEEEECCCCEECCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEE FMDVGAGISGTVQTFAALAAMRIVVITPEPTSLTDSYALIKVLNARYGLQDFMVIVNQVA EEECCCCCCHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH SASEAKASFDKLYGACRHFLHIEPVLLGHIRDDKKVPEAVCRQQPLMRIAPGSPAAQDIQ HHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCHHHHHHCCCCCEEECCCCCHHHHHH NLAARLQRLRLGMADWLAPRKVLQSISAKG HHHHHHHHHHHCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]