Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905140

Identifier: 220905140

GI number: 220905140

Start: 2263657

End: 2265150

Strand: Direct

Name: 220905140

Synonym: Ddes_1878

Alternate gene names: NA

Gene position: 2263657-2265150 (Clockwise)

Preceding gene: 220905139

Following gene: 220905141

Centisome position: 78.78

GC content: 61.31

Gene sequence:

>1494_bases
ATGCGCCCAAACCGTACCGCCATGCAAGTATACAGACCTTTCTCACAAGCACACAAGAGGCACAGGGGCCTGTCCACGGC
ACAGCAATGTATCTGCAGCCTGCTGATGTGTTGCGCCCTGCTCAGCCTGGCGGCCGCCGCGCGGGCGCAGGATGCCTTTT
CTCTGGATTTTACCGTGGTGCACCTGGGAGGCGGGCCGCGCACGGTGCTGGTTGTGGGTGGCATACAGGGAGATGAGCCG
GGCGGCTTCTCGGCCGCAAGCCTGCTGACCACCCACTATACCGTGGAAAACGGCAGTGTATGGGTAGTGCCCAACCTCAA
TTTTCCCAGTATCATCAAGCGGTCGCGCGGGCTGCATGGCGACATGAACCGCAAGTTCGCCCGCCTTGACCACAGTGACC
CGGAGTATGTCACCGTTCGACGCATACAGGATATCATTGACCACCCCGATGTGGCCCTGGTGCTGAACCTGCATGACGGC
AGCGGCTACTATCGCCATCAATACGAGAACAGGCTGCGCAATCCCGCGCGCTGGGGCCAGTCGGTTATCATTGACCAGGC
CAACCTGCCCGGCGCATTCATGAGTTCTCTGGGCGCGATGGCCGACGAAGCCGTGGCCGCCGCCAACGCGGGGCTTCTGG
CCCCCGACCACCGCCTGCATGTGCGCAATACCAATACGGCGGCGGGCGACCGCGAAATGGAAAAAAGCCTTTCCTACTAT
GCCGTGCGGCAAGGCAAGGCGGCCTTCGGCCTTGAAGCCAGCAAGGAATTTTCTGTGGAACTGCGTGCCTATTACCATCT
GCTGATGGTGGAATCCTTTTTGCGGCAGGCAGGGGTGGACTTCAGCCGCTCGTTTTCCCTTACACCCCAGGGCGTACGCC
AGGCGCTTCAGGACGATCTGGCCGTATCTTTTGCCGACAACCGGGTCTTTCTGCCCCTGGAAGACGTCCGGCCTGCCATA
AACTATTTGCCCCTGCCCAGAAGCGCTCCGGCCCGCGCCGTGCCGACCAAGCCCATCATGGCAGTACTGCCCTGTGCCAA
AGGCCATGAAGGCCAGTACTGCGTCCACTACGGCAATCGCATGATTACCCTCATCCGCCCCGAATGGCGTGAAGTGGACG
ACAGCCTTGGCGCAGCTCCGGTGCGCGTGGACGGGCAGGACACCCTGGTCCCCTTCGGGCAGATCGTTTATGCAAAAGAC
AGCCTGCTGGTGCACCCTCTTGAGGGCTACAGGGTCAACGCCATCGGCTTTGAGAACGGGCAGCCCGACGAAACGGGTGT
GGAACTGCGCCGCAAAGACTTCATGCCGCGTTTTTCGGTGGACAGACAGGCCCGGATATTCCGGGTAGAAGTTTACCGGG
GTCAGCTTTTCAGCGGCATGTTTCTGGTCTGCTTTGGTGATGGAGACCGGAAACGCCCAAGCGGATCGCACACCGTCCGC
AACGCCGCGCCGCTGCCTGCTGTTCCCGGGCCGGAGTCTGCCCTGGGCTTTTAA

Upstream 100 bases:

>100_bases
GAAACAGGCCGGGCCGCAATGGCCGAAACCGCGCCGGACAGGCACCACGGCCCGAGGTAGTGCAGCGGCCATAACCTACA
GGCAGACCGTCCGGACAACC

Downstream 100 bases:

>100_bases
GCTGTGCCCCACAATTCCCTGACTGCTGCACCTCCGGGCGCTGCCCGGAAGGGGGGCTTTCCCGGGCAGCAAATCGGCAT
TTTTACGTTGAACTGCTTTA

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein; Succinylglutamate Desuccinylase/Aspartoacylase; Purine Nucleoside Phosphorylase; Tat Pathway Signal Sequence Domain Protein; Secreted Protein

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MRPNRTAMQVYRPFSQAHKRHRGLSTAQQCICSLLMCCALLSLAAAARAQDAFSLDFTVVHLGGGPRTVLVVGGIQGDEP
GGFSAASLLTTHYTVENGSVWVVPNLNFPSIIKRSRGLHGDMNRKFARLDHSDPEYVTVRRIQDIIDHPDVALVLNLHDG
SGYYRHQYENRLRNPARWGQSVIIDQANLPGAFMSSLGAMADEAVAAANAGLLAPDHRLHVRNTNTAAGDREMEKSLSYY
AVRQGKAAFGLEASKEFSVELRAYYHLLMVESFLRQAGVDFSRSFSLTPQGVRQALQDDLAVSFADNRVFLPLEDVRPAI
NYLPLPRSAPARAVPTKPIMAVLPCAKGHEGQYCVHYGNRMITLIRPEWREVDDSLGAAPVRVDGQDTLVPFGQIVYAKD
SLLVHPLEGYRVNAIGFENGQPDETGVELRRKDFMPRFSVDRQARIFRVEVYRGQLFSGMFLVCFGDGDRKRPSGSHTVR
NAAPLPAVPGPESALGF

Sequences:

>Translated_497_residues
MRPNRTAMQVYRPFSQAHKRHRGLSTAQQCICSLLMCCALLSLAAAARAQDAFSLDFTVVHLGGGPRTVLVVGGIQGDEP
GGFSAASLLTTHYTVENGSVWVVPNLNFPSIIKRSRGLHGDMNRKFARLDHSDPEYVTVRRIQDIIDHPDVALVLNLHDG
SGYYRHQYENRLRNPARWGQSVIIDQANLPGAFMSSLGAMADEAVAAANAGLLAPDHRLHVRNTNTAAGDREMEKSLSYY
AVRQGKAAFGLEASKEFSVELRAYYHLLMVESFLRQAGVDFSRSFSLTPQGVRQALQDDLAVSFADNRVFLPLEDVRPAI
NYLPLPRSAPARAVPTKPIMAVLPCAKGHEGQYCVHYGNRMITLIRPEWREVDDSLGAAPVRVDGQDTLVPFGQIVYAKD
SLLVHPLEGYRVNAIGFENGQPDETGVELRRKDFMPRFSVDRQARIFRVEVYRGQLFSGMFLVCFGDGDRKRPSGSHTVR
NAAPLPAVPGPESALGF
>Mature_497_residues
MRPNRTAMQVYRPFSQAHKRHRGLSTAQQCICSLLMCCALLSLAAAARAQDAFSLDFTVVHLGGGPRTVLVVGGIQGDEP
GGFSAASLLTTHYTVENGSVWVVPNLNFPSIIKRSRGLHGDMNRKFARLDHSDPEYVTVRRIQDIIDHPDVALVLNLHDG
SGYYRHQYENRLRNPARWGQSVIIDQANLPGAFMSSLGAMADEAVAAANAGLLAPDHRLHVRNTNTAAGDREMEKSLSYY
AVRQGKAAFGLEASKEFSVELRAYYHLLMVESFLRQAGVDFSRSFSLTPQGVRQALQDDLAVSFADNRVFLPLEDVRPAI
NYLPLPRSAPARAVPTKPIMAVLPCAKGHEGQYCVHYGNRMITLIRPEWREVDDSLGAAPVRVDGQDTLVPFGQIVYAKD
SLLVHPLEGYRVNAIGFENGQPDETGVELRRKDFMPRFSVDRQARIFRVEVYRGQLFSGMFLVCFGDGDRKRPSGSHTVR
NAAPLPAVPGPESALGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54867; Mature: 54867

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS50073 COPPER_FIST_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPNRTAMQVYRPFSQAHKRHRGLSTAQQCICSLLMCCALLSLAAAARAQDAFSLDFTVV
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
HLGGGPRTVLVVGGIQGDEPGGFSAASLLTTHYTVENGSVWVVPNLNFPSIIKRSRGLHG
EECCCCEEEEEEECCCCCCCCCCCHHHEEEEEEEEECCCEEEEECCCCHHHHHHHCCCCC
DMNRKFARLDHSDPEYVTVRRIQDIIDHPDVALVLNLHDGSGYYRHQYENRLRNPARWGQ
CCCCHHHHCCCCCCCEEHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCHHHCCC
SVIIDQANLPGAFMSSLGAMADEAVAAANAGLLAPDHRLHVRNTNTAAGDREMEKSLSYY
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
AVRQGKAAFGLEASKEFSVELRAYYHLLMVESFLRQAGVDFSRSFSLTPQGVRQALQDDL
HHCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AVSFADNRVFLPLEDVRPAINYLPLPRSAPARAVPTKPIMAVLPCAKGHEGQYCVHYGNR
EEEEECCEEEEEHHHHCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCE
MITLIRPEWREVDDSLGAAPVRVDGQDTLVPFGQIVYAKDSLLVHPLEGYRVNAIGFENG
EEEEECCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCC
QPDETGVELRRKDFMPRFSVDRQARIFRVEVYRGQLFSGMFLVCFGDGDRKRPSGSHTVR
CCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC
NAAPLPAVPGPESALGF
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPNRTAMQVYRPFSQAHKRHRGLSTAQQCICSLLMCCALLSLAAAARAQDAFSLDFTVV
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
HLGGGPRTVLVVGGIQGDEPGGFSAASLLTTHYTVENGSVWVVPNLNFPSIIKRSRGLHG
EECCCCEEEEEEECCCCCCCCCCCHHHEEEEEEEEECCCEEEEECCCCHHHHHHHCCCCC
DMNRKFARLDHSDPEYVTVRRIQDIIDHPDVALVLNLHDGSGYYRHQYENRLRNPARWGQ
CCCCHHHHCCCCCCCEEHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCHHHCCC
SVIIDQANLPGAFMSSLGAMADEAVAAANAGLLAPDHRLHVRNTNTAAGDREMEKSLSYY
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
AVRQGKAAFGLEASKEFSVELRAYYHLLMVESFLRQAGVDFSRSFSLTPQGVRQALQDDL
HHCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AVSFADNRVFLPLEDVRPAINYLPLPRSAPARAVPTKPIMAVLPCAKGHEGQYCVHYGNR
EEEEECCEEEEEHHHHCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCE
MITLIRPEWREVDDSLGAAPVRVDGQDTLVPFGQIVYAKDSLLVHPLEGYRVNAIGFENG
EEEEECCCHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCC
QPDETGVELRRKDFMPRFSVDRQARIFRVEVYRGQLFSGMFLVCFGDGDRKRPSGSHTVR
CCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC
NAAPLPAVPGPESALGF
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA