Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220905126

Identifier: 220905126

GI number: 220905126

Start: 2247981

End: 2248361

Strand: Reverse

Name: 220905126

Synonym: Ddes_1864

Alternate gene names: NA

Gene position: 2248361-2247981 (Counterclockwise)

Preceding gene: 220905127

Following gene: 220905125

Centisome position: 78.25

GC content: 61.15

Gene sequence:

>381_bases
ATGAGCAAGACAGTTCTGGCGATTCCTTCCGAACTTCCCGGCGGCATGGACGCAGGCATGGGCATGCACTTTGGGCACTG
CGCCATCTACACTATTGTTGAAATAGAAAACGGGGCTGTGACGGCCCAGTCCACCCTGGCGGCTGTGCCGCATCAGCAGG
GAGGCTGCCTTGCGCCGGTGCAGTATCTTGCCGGTCACGGCGTCACGGCCCTGCTGGCGGGCGGCATGGGCATGCGCCCT
CTCGCGGGCTTTAACCAGATGAACATAGAGGTCTTTTTTGCGGGCAACTGCGCCACCGTGGGGCAGGCTGTGGAGGCTTT
TCTGCAGAACAAGCTCAACCGTTTCAATCTGGACCAGACCTGCGGCGGCTGCGAGCACTAG

Upstream 100 bases:

>100_bases
GAACTTGCCCGCATCTGGCGGCGCATTGCCGGGGCGGCGGATGCGGCTACCCGGCGCAATACAAACAGCACCATAAAAAC
CCTGTAAAGGATGTAGTACA

Downstream 100 bases:

>100_bases
GCCGTTGCCGTCTGCAAGGCTCTTGCCGGCGTTATTTCCGCCGGTGCGGCAAGCCCGGGCAATGGACAGAAAAAAGTTGT
CAGCCCGCTGTTTCACAGGC

Product: Dinitrogenase iron-molybdenum cofactor biosynthesis protein

Products: NA

Alternate protein names: Dinitrogenase Iron-Molybdenum Cofactor Biosynthesis; Dinitrogenase Iron-Molybdenum Cofactor Protein; Dinitrogenase Iron-Molybdenum Cofactor

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSKTVLAIPSELPGGMDAGMGMHFGHCAIYTIVEIENGAVTAQSTLAAVPHQQGGCLAPVQYLAGHGVTALLAGGMGMRP
LAGFNQMNIEVFFAGNCATVGQAVEAFLQNKLNRFNLDQTCGGCEH

Sequences:

>Translated_126_residues
MSKTVLAIPSELPGGMDAGMGMHFGHCAIYTIVEIENGAVTAQSTLAAVPHQQGGCLAPVQYLAGHGVTALLAGGMGMRP
LAGFNQMNIEVFFAGNCATVGQAVEAFLQNKLNRFNLDQTCGGCEH
>Mature_125_residues
SKTVLAIPSELPGGMDAGMGMHFGHCAIYTIVEIENGAVTAQSTLAAVPHQQGGCLAPVQYLAGHGVTALLAGGMGMRPL
AGFNQMNIEVFFAGNCATVGQAVEAFLQNKLNRFNLDQTCGGCEH

Specific function: Unknown

COG id: COG1433

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13066; Mature: 12935

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTVLAIPSELPGGMDAGMGMHFGHCAIYTIVEIENGAVTAQSTLAAVPHQQGGCLAPV
CCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEHHHHHHCCCCCCCCCCHHH
QYLAGHGVTALLAGGMGMRPLAGFNQMNIEVFFAGNCATVGQAVEAFLQNKLNRFNLDQT
HHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
CGGCEH
CCCCCC
>Mature Secondary Structure 
SKTVLAIPSELPGGMDAGMGMHFGHCAIYTIVEIENGAVTAQSTLAAVPHQQGGCLAPV
CCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEHHHHHHCCCCCCCCCCHHH
QYLAGHGVTALLAGGMGMRPLAGFNQMNIEVFFAGNCATVGQAVEAFLQNKLNRFNLDQT
HHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
CGGCEH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA